RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 CAMK2N2Q96S95 79 aa13.6□□□□□ -0.23
IRF3-214ENST00000596788 TTTY13Q9BZ97 58 aa13.6□□□□□ -0.23
IRF3-214ENST00000596788 CXCL5P42830 114 aa13.59□□□□□ -0.23
IRF3-214ENST00000596788 CKS1BP61024 79 aa13.59□□□□□ -0.23
IRF3-214ENST00000596788 C10orf25Q5T742 122 aa13.59□□□□□ -0.23
IRF3-214ENST00000596788 LINC00336Q6ZUF6 198 aa13.59□□□□□ -0.23
IRF3-214ENST00000596788 ZNF625Q96I27 306 aaPredicted RBP13.59□□□□□ -0.23
IRF3-214ENST00000596788 NDUFA12Q9UI09 145 aa13.59□□□□□ -0.23
IRF3-214ENST00000596788 NDUFA1O15239 70 aa13.58□□□□□ -0.24
IRF3-214ENST00000596788 UNQ6190/PRO20217Q6UXQ8 127 aa13.58□□□□□ -0.24
IRF3-214ENST00000596788 Q6ZRU5 148 aa13.58□□□□□ -0.24
IRF3-214ENST00000596788 F8WDY8 70 aa13.57□□□□□ -0.24
IRF3-214ENST00000596788 EREGO14944 169 aa13.57□□□□□ -0.24
IRF3-214ENST00000596788 CNBPP62633 177 aaKnown RBP13.57□□□□□ -0.24
IRF3-214ENST00000596788 SYCNQ0VAF6 134 aa13.57□□□□□ -0.24
IRF3-214ENST00000596788 PCP2Q8IVA1 136 aa13.57□□□□□ -0.24
IRF3-214ENST00000596788 CARD19Q96LW7 228 aa13.56□□□□□ -0.24
IRF3-214ENST00000596788 DNAH11Q96DT5 4516 aa13.56□□□□□ -0.24
IRF3-214ENST00000596788 FUSP35637 526 aaKnown RBP eCLIP13.55□□□□□ -0.24
IRF3-214ENST00000596788 C6orf48Q9UBA6 75 aa13.55□□□□□ -0.24
IRF3-214ENST00000596788 ZNF815PA8K554 130 aa13.54□□□□□ -0.24
IRF3-214ENST00000596788 MYMXA0A1B0GTQ4 84 aa13.53□□□□□ -0.24
IRF3-214ENST00000596788 S100A12P80511 92 aa13.53□□□□□ -0.24
IRF3-214ENST00000596788 SFTA2Q6UW10 78 aa13.53□□□□□ -0.24
IRF3-214ENST00000596788 TP73-AS1Q9UF72 201 aa13.53□□□□□ -0.24
IRF3-214ENST00000596788 KRTAP10-2P60368 255 aa13.52□□□□□ -0.25
IRF3-214ENST00000596788 C12orf57Q99622 126 aa13.52□□□□□ -0.25
IRF3-214ENST00000596788 TRBV30A0A0K0K1B3 111 aa13.51□□□□□ -0.25
IRF3-214ENST00000596788 COX8AP10176 69 aa13.51□□□□□ -0.25
IRF3-214ENST00000596788 C9orf116Q5BN46 136 aaPredicted RBP13.51□□□□□ -0.25
IRF3-214ENST00000596788 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.5□□□□□ -0.25
IRF3-214ENST00000596788 HERV-K104P63124 156 aa13.5□□□□□ -0.25
IRF3-214ENST00000596788 C14orf144Q96I85 54 aa13.5□□□□□ -0.25
IRF3-214ENST00000596788 A0A1B0GVY2 172 aa13.49□□□□□ -0.25
IRF3-214ENST00000596788 RNF151Q2KHN1 245 aa13.49□□□□□ -0.25
IRF3-214ENST00000596788 PKD1P98161 4303 aa13.49□□□□□ -0.25
IRF3-214ENST00000596788 IGLV5-52A0A0A0MRZ9 124 aa13.48□□□□□ -0.25
IRF3-214ENST00000596788 A0A0J9YXY3 114 aa13.48□□□□□ -0.25
IRF3-214ENST00000596788 BOD1L2Q8IYS8 172 aa13.48□□□□□ -0.25
IRF3-214ENST00000596788 LINC00518Q8N0U6 118 aa13.48□□□□□ -0.25
IRF3-214ENST00000596788 ERG28Q9UKR5 140 aa13.48□□□□□ -0.25
IRF3-214ENST00000596788 LINC01620Q4KN68 170 aa13.47□□□□□ -0.25
IRF3-214ENST00000596788 C9orf163Q8N9P6 203 aa13.47□□□□□ -0.25
IRF3-214ENST00000596788 MEIG1Q5JSS6 88 aa13.46□□□□□ -0.25
IRF3-214ENST00000596788 DLEU1O43261 78 aa13.44□□□□□ -0.26
IRF3-214ENST00000596788 SMIM13P0DJ93 91 aa13.44□□□□□ -0.26
IRF3-214ENST00000596788 PFN2P35080 140 aa13.44□□□□□ -0.26
IRF3-214ENST00000596788 SLC25A34Q6PIV7 304 aa13.43□□□□□ -0.26
IRF3-214ENST00000596788 SCGB1D4Q6XE38 83 aa13.43□□□□□ -0.26
IRF3-214ENST00000596788 PGPEP1Q9NXJ5 209 aa13.43□□□□□ -0.26
IRF3-214ENST00000596788 HECTD4Q9Y4D8 3996 aa13.43□□□□□ -0.26
IRF3-214ENST00000596788 A0A0U1RRA0 63 aa13.42□□□□□ -0.26
IRF3-214ENST00000596788 TLX1NBP0CAT3 122 aa13.42□□□□□ -0.26
IRF3-214ENST00000596788 LITAFQ99732 161 aa13.42□□□□□ -0.26
IRF3-214ENST00000596788 PRO1933Q9H354 126 aa13.42□□□□□ -0.26
IRF3-214ENST00000596788 LOC107984640A0A0U1RRK4 108 aa13.41□□□□□ -0.26
IRF3-214ENST00000596788 NDUFC2-KCTD14E9PQ53 114 aa13.41□□□□□ -0.26
IRF3-214ENST00000596788 DNAH5Q8TE73 4624 aa13.41□□□□□ -0.26
IRF3-214ENST00000596788 TIMM17BO60830 172 aa13.4□□□□□ -0.26
IRF3-214ENST00000596788 LINC00158P58513 81 aa13.4□□□□□ -0.26
IRF3-214ENST00000596788 RPL18AQ02543 176 aaKnown RBP13.4□□□□□ -0.26
IRF3-214ENST00000596788 COX17Q14061 63 aa13.4□□□□□ -0.26
IRF3-214ENST00000596788 LINC00587B1AMM8 73 aa13.39□□□□□ -0.27
IRF3-214ENST00000596788 SDIM1Q6ZPB5 146 aa13.39□□□□□ -0.27
IRF3-214ENST00000596788 Q6ZRP5 223 aa13.39□□□□□ -0.27
IRF3-214ENST00000596788 ADAMTSL4-AS1Q5T5F5 129 aa13.38□□□□□ -0.27
IRF3-214ENST00000596788 C2orf91Q6ZV80 131 aa13.38□□□□□ -0.27
IRF3-214ENST00000596788 MIR7-3HGQ8N6C7 128 aa13.38□□□□□ -0.27
IRF3-214ENST00000596788 DAND5Q8N907 189 aa13.38□□□□□ -0.27
IRF3-214ENST00000596788 A0A096LNI7 61 aa13.37□□□□□ -0.27
IRF3-214ENST00000596788 CIRBPQ14011 172 aaKnown RBP13.37□□□□□ -0.27
IRF3-214ENST00000596788 UQCR10Q9UDW1 63 aa13.37□□□□□ -0.27
IRF3-214ENST00000596788 GCSHP23434 173 aa13.36□□□□□ -0.27
IRF3-214ENST00000596788 GAGE2BQ13066 116 aa13.36□□□□□ -0.27
IRF3-214ENST00000596788 GAGE2EQ4V326 116 aa13.36□□□□□ -0.27
IRF3-214ENST00000596788 GAGE2DQ9UEU5 116 aa13.36□□□□□ -0.27
IRF3-214ENST00000596788 PKIGQ9Y2B9 76 aa13.36□□□□□ -0.27
IRF3-214ENST00000596788 TMEM238C9JI98 176 aa13.35□□□□□ -0.27
IRF3-214ENST00000596788 PTTG1IPP53801 180 aa13.35□□□□□ -0.27
IRF3-214ENST00000596788 SND1-IT1Q9HBX3 110 aa13.35□□□□□ -0.27
IRF3-214ENST00000596788 C16orf90A8MZG2 172 aa13.34□□□□□ -0.27
IRF3-214ENST00000596788 CHTF8P0CG12 524 aa13.34□□□□□ -0.27
IRF3-214ENST00000596788 XAGE1AQ9HD64 81 aa13.34□□□□□ -0.27
IRF3-214ENST00000596788 IGKV2-24A0A0C4DH68 120 aa13.33□□□□□ -0.28
IRF3-214ENST00000596788 KRTAP10-1P60331 282 aa13.33□□□□□ -0.28
IRF3-214ENST00000596788 MIEN1Q9BRT3 115 aa13.33□□□□□ -0.28
IRF3-214ENST00000596788 SPANXDQ9BXN6 97 aa13.33□□□□□ -0.28
IRF3-214ENST00000596788 SPANXCQ9NY87 97 aa13.33□□□□□ -0.28
IRF3-214ENST00000596788 HIGD1BQ9P298 99 aa13.33□□□□□ -0.28
IRF3-214ENST00000596788 PANO1I0J062 215 aa13.32□□□□□ -0.28
IRF3-214ENST00000596788 C9orf129Q5T035 196 aaKnown RBP13.32□□□□□ -0.28
IRF3-214ENST00000596788 SPANXB1Q9NS25 103 aaPredicted RBP13.32□□□□□ -0.28
IRF3-214ENST00000596788 PKHD1P08F94 4074 aa13.31□□□□□ -0.28
IRF3-214ENST00000596788 TSTD3H0UI37 97 aa13.31□□□□□ -0.28
IRF3-214ENST00000596788 NPC2P61916 151 aa13.31□□□□□ -0.28
IRF3-214ENST00000596788 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.31□□□□□ -0.28
IRF3-214ENST00000596788 EIF4EBP3O60516 100 aaPredicted RBP13.3□□□□□ -0.28
IRF3-214ENST00000596788 SOSTDC1Q6X4U4 206 aa13.3□□□□□ -0.28
IRF3-214ENST00000596788 DYNC1H1Q14204 4646 aaKnown RBP13.28□□□□□ -0.28
IRF3-214ENST00000596788 HNRNPA3P51991 378 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms