RNA–Protein interactions for RNA: ENST00000595681.5

SH2D3A-204, Transcript of SH2 domain containing 3A, humanhuman

TSL 5

Gene SH2D3A, Length 1,750 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-204ENST00000595681 FAM19A2Q8N3H0 131 aa13.21□□□□□ -0.29
SH2D3A-204ENST00000595681 TINCRA0A1B0GVN0 87 aa13.2□□□□□ -0.3
SH2D3A-204ENST00000595681 C2orf82Q6UX34 121 aa13.2□□□□□ -0.3
SH2D3A-204ENST00000595681 NDUFA1O15239 70 aa13.2□□□□□ -0.3
SH2D3A-204ENST00000595681 LINC00310P59036 64 aa13.19□□□□□ -0.3
SH2D3A-204ENST00000595681 GAGE2BQ13066 116 aa13.19□□□□□ -0.3
SH2D3A-204ENST00000595681 LINC01561Q8N1V8 128 aa13.19□□□□□ -0.3
SH2D3A-204ENST00000595681 PACRGQ96M98 296 aaPredicted RBP13.19□□□□□ -0.3
SH2D3A-204ENST00000595681 HSBP1O75506 76 aa13.18□□□□□ -0.3
SH2D3A-204ENST00000595681 S100A2P29034 98 aa13.18□□□□□ -0.3
SH2D3A-204ENST00000595681 C6orf48Q9UBA6 75 aa13.18□□□□□ -0.3
SH2D3A-204ENST00000595681 MYCBP2O75592 4640 aa13.18□□□□□ -0.3
SH2D3A-204ENST00000595681 LOC107984640A0A0U1RRK4 108 aa13.17□□□□□ -0.3
SH2D3A-204ENST00000595681 SERF1AO75920 110 aa13.17□□□□□ -0.3
SH2D3A-204ENST00000595681 ATP5LO75964 103 aa13.17□□□□□ -0.3
SH2D3A-204ENST00000595681 INAFM2P0DMQ5 153 aa13.17□□□□□ -0.3
SH2D3A-204ENST00000595681 KRTAP10-4P60372 401 aaPredicted RBP13.17□□□□□ -0.3
SH2D3A-204ENST00000595681 RPL18AQ02543 176 aaKnown RBP13.17□□□□□ -0.3
SH2D3A-204ENST00000595681 MRPL35Q9NZE8 188 aaKnown RBP13.17□□□□□ -0.3
SH2D3A-204ENST00000595681 STPG4Q8N801 248 aa13.17□□□□□ -0.3
SH2D3A-204ENST00000595681 PCP4L1A6NKN8 68 aa13.16□□□□□ -0.3
SH2D3A-204ENST00000595681 NUPR1O60356 82 aa13.16□□□□□ -0.3
SH2D3A-204ENST00000595681 IGLV5-45A0A087WSX0 123 aa13.15□□□□□ -0.3
SH2D3A-204ENST00000595681 SMIM1B2RUZ4 78 aa13.15□□□□□ -0.3
SH2D3A-204ENST00000595681 PRSS2P07478 247 aa13.15□□□□□ -0.3
SH2D3A-204ENST00000595681 SPINK8P0C7L1 97 aa13.15□□□□□ -0.3
SH2D3A-204ENST00000595681 PTTG1IPP53801 180 aa13.15□□□□□ -0.3
SH2D3A-204ENST00000595681 PLA2G1BP04054 148 aaKnown RBP13.15□□□□□ -0.31
SH2D3A-204ENST00000595681 COA6Q5JTJ3 125 aaKnown RBP13.15□□□□□ -0.31
SH2D3A-204ENST00000595681 PLAC8Q9NZF1 115 aa13.15□□□□□ -0.31
SH2D3A-204ENST00000595681 F8WDY8 70 aa13.14□□□□□ -0.31
SH2D3A-204ENST00000595681 IGLC3P0DOY3 106 aa13.14□□□□□ -0.31
SH2D3A-204ENST00000595681 FABP4P15090 132 aa13.14□□□□□ -0.31
SH2D3A-204ENST00000595681 C9orf116Q5BN46 136 aaPredicted RBP13.14□□□□□ -0.31
SH2D3A-204ENST00000595681 C6orf226Q5I0X4 101 aa13.14□□□□□ -0.31
SH2D3A-204ENST00000595681 RNF151Q2KHN1 245 aa13.13□□□□□ -0.31
SH2D3A-204ENST00000595681 Q8IZM0 81 aa13.13□□□□□ -0.31
SH2D3A-204ENST00000595681 IFI27L1Q96BM0 104 aa13.13□□□□□ -0.31
SH2D3A-204ENST00000595681 PKIGQ9Y2B9 76 aa13.13□□□□□ -0.31
SH2D3A-204ENST00000595681 HIST1H2BLQ99880 126 aa13.12□□□□□ -0.31
SH2D3A-204ENST00000595681 FLG2Q5D862 2391 aaPredicted RBP13.12□□□□□ -0.31
SH2D3A-204ENST00000595681 CKS1BP61024 79 aa13.12□□□□□ -0.31
SH2D3A-204ENST00000595681 ZNF22P17026 224 aaPredicted RBP13.11□□□□□ -0.31
SH2D3A-204ENST00000595681 LINC00474Q9P2X8 69 aa13.11□□□□□ -0.31
SH2D3A-204ENST00000595681 C11orf86A6NJI1 115 aa13.1□□□□□ -0.31
SH2D3A-204ENST00000595681 Q6ZRP5 223 aa13.1□□□□□ -0.31
SH2D3A-204ENST00000595681 CHTOPQ9Y3Y2 248 aaKnown RBP13.09□□□□□ -0.31
SH2D3A-204ENST00000595681 TRBV30A0A0K0K1B3 111 aa13.09□□□□□ -0.31
SH2D3A-204ENST00000595681 H0Y8G0 127 aa13.09□□□□□ -0.31
SH2D3A-204ENST00000595681 RPL37AP61513 92 aaKnown RBP13.09□□□□□ -0.31
SH2D3A-204ENST00000595681 GAGE2EQ4V326 116 aa13.09□□□□□ -0.31
SH2D3A-204ENST00000595681 PYY3Q5JQD4 70 aa13.09□□□□□ -0.31
SH2D3A-204ENST00000595681 COX7B2Q8TF08 81 aa13.09□□□□□ -0.31
SH2D3A-204ENST00000595681 GAGE2DQ9UEU5 116 aa13.09□□□□□ -0.31
SH2D3A-204ENST00000595681 A0A1W2PNN7 141 aa13.08□□□□□ -0.32
SH2D3A-204ENST00000595681 H3BRM9 83 aa13.08□□□□□ -0.32
SH2D3A-204ENST00000595681 LEPROTL1O95214 131 aa13.07□□□□□ -0.32
SH2D3A-204ENST00000595681 TMEM170BQ5T4T1 132 aa13.07□□□□□ -0.32
SH2D3A-204ENST00000595681 TLX1NBP0CAT3 122 aa13.06□□□□□ -0.32
SH2D3A-204ENST00000595681 TRAV12-1A0A0B4J245 112 aa13.05□□□□□ -0.32
SH2D3A-204ENST00000595681 F8VRH5 84 aa13.04□□□□□ -0.32
SH2D3A-204ENST00000595681 HNRNPA3P51991 378 aaKnown RBP13.04□□□□□ -0.32
SH2D3A-204ENST00000595681 FAM168BA1KXE4 195 aa13.04□□□□□ -0.32
SH2D3A-204ENST00000595681 PKHD1L1Q86WI1 4243 aa13.04□□□□□ -0.32
SH2D3A-204ENST00000595681 NDUFC2-KCTD14E9PQ53 114 aa13.03□□□□□ -0.32
SH2D3A-204ENST00000595681 IGLV5-39A0A0G2JS06 123 aa13.02□□□□□ -0.32
SH2D3A-204ENST00000595681 S100A12P80511 92 aa13.02□□□□□ -0.32
SH2D3A-204ENST00000595681 CXCL5P42830 114 aa13.02□□□□□ -0.33
SH2D3A-204ENST00000595681 C7orf33Q8WU49 177 aa13.02□□□□□ -0.33
SH2D3A-204ENST00000595681 LRP1Q07954 4544 aaKnown RBP13□□□□□ -0.33
SH2D3A-204ENST00000595681 ODF1Q14990 250 aa13□□□□□ -0.33
SH2D3A-204ENST00000595681 C9orf129Q5T035 196 aaKnown RBP12.99□□□□□ -0.33
SH2D3A-204ENST00000595681 FAM19A5Q7Z5A7 132 aaPredicted RBP12.99□□□□□ -0.33
SH2D3A-204ENST00000595681 HSPB8Q9UJY1 196 aa12.99□□□□□ -0.33
SH2D3A-204ENST00000595681 JOSD1Q15040 202 aaPredicted RBP12.98□□□□□ -0.33
SH2D3A-204ENST00000595681 PHF5AQ7RTV0 110 aaKnown RBP12.98□□□□□ -0.33
SH2D3A-204ENST00000595681 PMCHL2Q9BQD1 86 aa12.98□□□□□ -0.33
SH2D3A-204ENST00000595681 XAGE1AQ9HD64 81 aa12.98□□□□□ -0.33
SH2D3A-204ENST00000595681 HERC1Q15751 4861 aa12.98□□□□□ -0.33
SH2D3A-204ENST00000595681 TMEM223A0PJW6 202 aa12.97□□□□□ -0.33
SH2D3A-204ENST00000595681 KRTAP7-1Q8IUC3 87 aa12.97□□□□□ -0.33
SH2D3A-204ENST00000595681 FAT3Q8TDW7 4589 aa12.95□□□□□ -0.34
SH2D3A-204ENST00000595681 ZNF625Q96I27 306 aaPredicted RBP12.95□□□□□ -0.34
SH2D3A-204ENST00000595681 PRR3P79522 188 aaKnown RBP12.94□□□□□ -0.34
SH2D3A-204ENST00000595681 LINC00587B1AMM8 73 aa12.92□□□□□ -0.34
SH2D3A-204ENST00000595681 PFN2P35080 140 aa12.92□□□□□ -0.34
SH2D3A-204ENST00000595681 SERTAD4-AS1Q5TG53 156 aa12.92□□□□□ -0.34
SH2D3A-204ENST00000595681 MAP1LC3CQ9BXW4 147 aa12.92□□□□□ -0.34
SH2D3A-204ENST00000595681 DMBT1Q9UGM3 2413 aaPredicted RBP12.91□□□□□ -0.34
SH2D3A-204ENST00000595681 M0QXV9 152 aa12.89□□□□□ -0.35
SH2D3A-204ENST00000595681 KRTAP11-1Q8IUC1 163 aa12.89□□□□□ -0.35
SH2D3A-204ENST00000595681 SCGB1D1O95968 90 aa12.89□□□□□ -0.35
SH2D3A-204ENST00000595681 DPM2O94777 84 aa12.88□□□□□ -0.35
SH2D3A-204ENST00000595681 PLNP26678 52 aa12.88□□□□□ -0.35
SH2D3A-204ENST00000595681 ERG28Q9UKR5 140 aa12.88□□□□□ -0.35
SH2D3A-204ENST00000595681 PSORS1C2Q9UIG4 136 aa12.87□□□□□ -0.35
SH2D3A-204ENST00000595681 SYS1-DBNDD2H3BUS1 97 aa12.86□□□□□ -0.35
SH2D3A-204ENST00000595681 IGKCP01834 107 aa12.86□□□□□ -0.35
SH2D3A-204ENST00000595681 PRO1933Q9H354 126 aa12.86□□□□□ -0.35
SH2D3A-204ENST00000595681 KRTAP29-1A8MX34 341 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms