RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 PMVKQ15126 192 aa10.83□□□□□ -0.68
IRF3-208ENST00000594387 CST9LQ9H4G1 147 aa10.82□□□□□ -0.68
IRF3-208ENST00000594387 NDUFC2-KCTD14E9PQ53 114 aa10.81□□□□□ -0.68
IRF3-208ENST00000594387 CXCL5P42830 114 aa10.81□□□□□ -0.68
IRF3-208ENST00000594387 NDUFA6P56556 154 aa10.81□□□□□ -0.68
IRF3-208ENST00000594387 SPINK6Q6UWN8 80 aa10.81□□□□□ -0.68
IRF3-208ENST00000594387 H3BRM9 83 aa10.8□□□□□ -0.68
IRF3-208ENST00000594387 PDZD11Q5EBL8 140 aa10.8□□□□□ -0.68
IRF3-208ENST00000594387 SERTAD4-AS1Q5TG53 156 aa10.8□□□□□ -0.68
IRF3-208ENST00000594387 C18orf32Q8TCD1 76 aa10.8□□□□□ -0.68
IRF3-208ENST00000594387 HBDP02042 147 aa10.79□□□□□ -0.68
IRF3-208ENST00000594387 REG3GQ6UW15 175 aa10.79□□□□□ -0.68
IRF3-208ENST00000594387 PHF5AQ7RTV0 110 aaKnown RBP10.79□□□□□ -0.68
IRF3-208ENST00000594387 FAM19A5Q7Z5A7 132 aaPredicted RBP10.79□□□□□ -0.68
IRF3-208ENST00000594387 F8VRH5 84 aa10.78□□□□□ -0.68
IRF3-208ENST00000594387 COX7B2Q8TF08 81 aa10.77□□□□□ -0.69
IRF3-208ENST00000594387 ATP5LO75964 103 aa10.76□□□□□ -0.69
IRF3-208ENST00000594387 UBE2BP63146 152 aa10.76□□□□□ -0.69
IRF3-208ENST00000594387 C1orf137Q5JT78 98 aa10.76□□□□□ -0.69
IRF3-208ENST00000594387 IGLV5-45A0A087WSX0 123 aa10.75□□□□□ -0.69
IRF3-208ENST00000594387 FAM168BA1KXE4 195 aa10.75□□□□□ -0.69
IRF3-208ENST00000594387 SMIM1B2RUZ4 78 aa10.75□□□□□ -0.69
IRF3-208ENST00000594387 PSORS1C2Q9UIG4 136 aa10.75□□□□□ -0.69
IRF3-208ENST00000594387 MYCBP2O75592 4640 aa10.74□□□□□ -0.69
IRF3-208ENST00000594387 M0QXV9 152 aa10.74□□□□□ -0.69
IRF3-208ENST00000594387 SPINK8P0C7L1 97 aa10.73□□□□□ -0.69
IRF3-208ENST00000594387 PMCHL1Q16048 86 aa10.73□□□□□ -0.69
IRF3-208ENST00000594387 URB1-AS1Q96HZ7 61 aa10.72□□□□□ -0.69
IRF3-208ENST00000594387 IGLC3P0DOY3 106 aa10.71□□□□□ -0.69
IRF3-208ENST00000594387 SRSF9Q13242 221 aaKnown RBP eCLIP10.71□□□□□ -0.69
IRF3-208ENST00000594387 C9orf129Q5T035 196 aaKnown RBP10.71□□□□□ -0.69
IRF3-208ENST00000594387 BAGE3Q86Y29 109 aa10.71□□□□□ -0.69
IRF3-208ENST00000594387 CHCHD1Q96BP2 118 aaKnown RBP10.71□□□□□ -0.69
IRF3-208ENST00000594387 A0A096LNJ9 63 aa10.7□□□□□ -0.7
IRF3-208ENST00000594387 LINC01600Q96MT4 127 aa10.7□□□□□ -0.7
IRF3-208ENST00000594387 LBHQ53QV2 105 aaPredicted RBP10.69□□□□□ -0.7
IRF3-208ENST00000594387 XAGE1AQ9HD64 81 aa10.69□□□□□ -0.7
IRF3-208ENST00000594387 IGLV7-43P04211 117 aa10.68□□□□□ -0.7
IRF3-208ENST00000594387 CBLN2Q8IUK8 224 aa10.68□□□□□ -0.7
IRF3-208ENST00000594387 YPEL4Q96NS1 127 aa10.68□□□□□ -0.7
IRF3-208ENST00000594387 HSBP1O75506 76 aa10.67□□□□□ -0.7
IRF3-208ENST00000594387 TMEM170BQ5T4T1 132 aa10.67□□□□□ -0.7
IRF3-208ENST00000594387 DIRC1Q969H9 104 aa10.67□□□□□ -0.7
IRF3-208ENST00000594387 MT1HL1P0DM35 61 aa10.66□□□□□ -0.7
IRF3-208ENST00000594387 PLA2G2DQ9UNK4 145 aa10.66□□□□□ -0.7
IRF3-208ENST00000594387 CHTOPQ9Y3Y2 248 aaKnown RBP10.66□□□□□ -0.7
IRF3-208ENST00000594387 ZNF22P17026 224 aaPredicted RBP10.65□□□□□ -0.7
IRF3-208ENST00000594387 SLC7A5P1Q8MH63 180 aa10.65□□□□□ -0.7
IRF3-208ENST00000594387 IFI27L1Q96BM0 104 aa10.65□□□□□ -0.7
IRF3-208ENST00000594387 C22orf24Q9Y442 160 aa10.65□□□□□ -0.7
IRF3-208ENST00000594387 SFTA2Q6UW10 78 aa10.64□□□□□ -0.71
IRF3-208ENST00000594387 PKHD1L1Q86WI1 4243 aa10.64□□□□□ -0.71
IRF3-208ENST00000594387 KRTAP7-1Q8IUC3 87 aa10.63□□□□□ -0.71
IRF3-208ENST00000594387 TP73-AS1Q9UF72 201 aa10.63□□□□□ -0.71
IRF3-208ENST00000594387 IGLV5-39A0A0G2JS06 123 aa10.62□□□□□ -0.71
IRF3-208ENST00000594387 C11orf86A6NJI1 115 aa10.62□□□□□ -0.71
IRF3-208ENST00000594387 NUPR1O60356 82 aa10.62□□□□□ -0.71
IRF3-208ENST00000594387 TRGC2P03986 189 aa10.62□□□□□ -0.71
IRF3-208ENST00000594387 PFN2P35080 140 aa10.62□□□□□ -0.71
IRF3-208ENST00000594387 MRPL55Q7Z7F7 128 aaKnown RBP10.62□□□□□ -0.71
IRF3-208ENST00000594387 HERC1Q15751 4861 aa10.62□□□□□ -0.71
IRF3-208ENST00000594387 TRAV12-1A0A0B4J245 112 aa10.61□□□□□ -0.71
IRF3-208ENST00000594387 ODF1Q14990 250 aa10.61□□□□□ -0.71
IRF3-208ENST00000594387 NKAPP1Q8N9T2 125 aa10.61□□□□□ -0.71
IRF3-208ENST00000594387 LRP1Q07954 4544 aaKnown RBP10.6□□□□□ -0.71
IRF3-208ENST00000594387 COX17Q14061 63 aa10.6□□□□□ -0.71
IRF3-208ENST00000594387 KRTAP11-1Q8IUC1 163 aa10.6□□□□□ -0.71
IRF3-208ENST00000594387 FAM19A2Q8N3H0 131 aa10.59□□□□□ -0.71
IRF3-208ENST00000594387 ERG28Q9UKR5 140 aa10.59□□□□□ -0.71
IRF3-208ENST00000594387 H0Y9J4 135 aa10.58□□□□□ -0.72
IRF3-208ENST00000594387 LEPROTL1O95214 131 aa10.57□□□□□ -0.72
IRF3-208ENST00000594387 ZNF625Q96I27 306 aaPredicted RBP10.57□□□□□ -0.72
IRF3-208ENST00000594387 H0Y8G0 127 aa10.56□□□□□ -0.72
IRF3-208ENST00000594387 ATP6V1G1O75348 118 aa10.56□□□□□ -0.72
IRF3-208ENST00000594387 KRTAP10-8P60410 259 aa10.56□□□□□ -0.72
IRF3-208ENST00000594387 LINC00167Q96N53 147 aa10.56□□□□□ -0.72
IRF3-208ENST00000594387 FAT3Q8TDW7 4589 aa10.56□□□□□ -0.72
IRF3-208ENST00000594387 RPL24P83731 157 aaKnown RBP10.55□□□□□ -0.72
IRF3-208ENST00000594387 TMEM223A0PJW6 202 aa10.54□□□□□ -0.72
IRF3-208ENST00000594387 GAGE10A6NGK3 116 aa10.54□□□□□ -0.72
IRF3-208ENST00000594387 RPL37AP8A6NKH3 93 aa10.54□□□□□ -0.72
IRF3-208ENST00000594387 ZNF861PO60384 105 aa10.54□□□□□ -0.72
IRF3-208ENST00000594387 SERF1AO75920 110 aa10.54□□□□□ -0.72
IRF3-208ENST00000594387 HSPB8Q9UJY1 196 aa10.54□□□□□ -0.72
IRF3-208ENST00000594387 IGLV5-37A0A075B6J1 123 aa10.53□□□□□ -0.72
IRF3-208ENST00000594387 RPL28P46779 137 aaKnown RBP10.53□□□□□ -0.72
IRF3-208ENST00000594387 LINC00158P58513 81 aa10.53□□□□□ -0.72
IRF3-208ENST00000594387 SND1-IT1Q9HBX3 110 aa10.53□□□□□ -0.72
IRF3-208ENST00000594387 COLCA2A8K830 154 aa10.52□□□□□ -0.73
IRF3-208ENST00000594387 LINC00587B1AMM8 73 aa10.51□□□□□ -0.73
IRF3-208ENST00000594387 BCE1O60756 84 aa10.51□□□□□ -0.73
IRF3-208ENST00000594387 IGLV1-50A0A075B6I6 118 aa10.5□□□□□ -0.73
IRF3-208ENST00000594387 FABP4P15090 132 aa10.5□□□□□ -0.73
IRF3-208ENST00000594387 MEIG1Q5JSS6 88 aa10.5□□□□□ -0.73
IRF3-208ENST00000594387 HERV-K104P63124 156 aa10.49□□□□□ -0.73
IRF3-208ENST00000594387 PRR26Q8N8Z3 221 aa10.49□□□□□ -0.73
IRF3-208ENST00000594387 A0A0U1RRA0 63 aa10.48□□□□□ -0.73
IRF3-208ENST00000594387 PLNP26678 52 aa10.48□□□□□ -0.73
IRF3-208ENST00000594387 RPL13AP40429 203 aaKnown RBP10.48□□□□□ -0.73
IRF3-208ENST00000594387 UBE2AP49459 152 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms