RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 H2AFB2P0C5Z0 115 aa5.86□□□□□ -1.47
ZNF558-202ENST00000593891 MAP1LC3B2A6NCE7 125 aa5.85□□□□□ -1.47
ZNF558-202ENST00000593891 PFDN1O60925 122 aa5.85□□□□□ -1.47
ZNF558-202ENST00000593891 RPL39P62891 51 aaKnown RBP5.85□□□□□ -1.47
ZNF558-202ENST00000593891 C9orf153Q5TBE3 101 aa5.85□□□□□ -1.47
ZNF558-202ENST00000593891 MAP1LC3BQ9GZQ8 125 aa5.85□□□□□ -1.47
ZNF558-202ENST00000593891 RPL35P42766 123 aaKnown RBP5.84□□□□□ -1.47
ZNF558-202ENST00000593891 C6orf99Q4VX62 202 aa5.84□□□□□ -1.47
ZNF558-202ENST00000593891 A6NN06 94 aa5.83□□□□□ -1.48
ZNF558-202ENST00000593891 CXCL5P42830 114 aa5.83□□□□□ -1.48
ZNF558-202ENST00000593891 SPRR2EP22531 72 aa5.82□□□□□ -1.48
ZNF558-202ENST00000593891 SPRR2BP35325 72 aa5.82□□□□□ -1.48
ZNF558-202ENST00000593891 SPRR2AP35326 72 aa5.82□□□□□ -1.48
ZNF558-202ENST00000593891 RAB5BP61020 215 aa5.82□□□□□ -1.48
ZNF558-202ENST00000593891 RPL24P83731 157 aaKnown RBP5.82□□□□□ -1.48
ZNF558-202ENST00000593891 CHTOPQ9Y3Y2 248 aaKnown RBP5.82□□□□□ -1.48
ZNF558-202ENST00000593891 LYRM1O43325 122 aa5.81□□□□□ -1.48
ZNF558-202ENST00000593891 PPP1R17O96001 155 aa5.81□□□□□ -1.48
ZNF558-202ENST00000593891 TAGLN2P37802 199 aaKnown RBP5.81□□□□□ -1.48
ZNF558-202ENST00000593891 SUMO2P61956 95 aaKnown RBP5.81□□□□□ -1.48
ZNF558-202ENST00000593891 AKR1C8PQ5T2L2 129 aa5.81□□□□□ -1.48
ZNF558-202ENST00000593891 TRBV20OR9-2A0A075B6H5 130 aa5.8□□□□□ -1.48
ZNF558-202ENST00000593891 FAM236DA0A1B0GTK5 79 aa5.8□□□□□ -1.48
ZNF558-202ENST00000593891 TCAPO15273 167 aa5.8□□□□□ -1.48
ZNF558-202ENST00000593891 FAM236CP0DP71 79 aa5.8□□□□□ -1.48
ZNF558-202ENST00000593891 VPREB1P12018 145 aa5.8□□□□□ -1.48
ZNF558-202ENST00000593891 H2BFSP57053 126 aa5.8□□□□□ -1.48
ZNF558-202ENST00000593891 KIAA1644Q3SXP7 199 aa5.8□□□□□ -1.48
ZNF558-202ENST00000593891 CENPWQ5EE01 88 aa5.8□□□□□ -1.48
ZNF558-202ENST00000593891 BIN3Q9NQY0 253 aa5.8□□□□□ -1.48
ZNF558-202ENST00000593891 HRCT1Q6UXD1 115 aa5.79□□□□□ -1.48
ZNF558-202ENST00000593891 PPP1R2P9O14990 202 aa5.78□□□□□ -1.48
ZNF558-202ENST00000593891 PLA2G10O15496 165 aa5.78□□□□□ -1.48
ZNF558-202ENST00000593891 MED9Q9NWA0 146 aa5.78□□□□□ -1.48
ZNF558-202ENST00000593891 NOL3O60936 208 aaKnown RBP5.77□□□□□ -1.49
ZNF558-202ENST00000593891 ATP6V1G2O95670 118 aa5.77□□□□□ -1.49
ZNF558-202ENST00000593891 IL7P13232 177 aa5.77□□□□□ -1.49
ZNF558-202ENST00000593891 IFI27P40305 119 aaPredicted RBP5.77□□□□□ -1.49
ZNF558-202ENST00000593891 NUDT10Q8NFP7 164 aa5.77□□□□□ -1.49
ZNF558-202ENST00000593891 SMIM12Q96EX1 92 aa5.77□□□□□ -1.49
ZNF558-202ENST00000593891 NUDT11Q96G61 164 aa5.77□□□□□ -1.49
ZNF558-202ENST00000593891 FXYD6-FXYD2A0A087WZ82 144 aa5.76□□□□□ -1.49
ZNF558-202ENST00000593891 PRSS47A8MTI9 375 aa5.76□□□□□ -1.49
ZNF558-202ENST00000593891 RAB4AP20338 218 aa5.76□□□□□ -1.49
ZNF558-202ENST00000593891 GNG4P50150 75 aa5.76□□□□□ -1.49
ZNF558-202ENST00000593891 SMKR1H3BMG3 65 aa5.75□□□□□ -1.49
ZNF558-202ENST00000593891 RAB14P61106 215 aa5.75□□□□□ -1.49
ZNF558-202ENST00000593891 TEX43Q6ZNM6 134 aa5.75□□□□□ -1.49
ZNF558-202ENST00000593891 C2orf88Q9BSF0 95 aa5.75□□□□□ -1.49
ZNF558-202ENST00000593891 TMEM191AQ9H0A3 160 aa5.75□□□□□ -1.49
ZNF558-202ENST00000593891 Q8N9P0 234 aaPredicted RBP5.74□□□□□ -1.49
ZNF558-202ENST00000593891 TMEM141Q96I45 108 aa5.74□□□□□ -1.49
ZNF558-202ENST00000593891 BORCS7-ASMTA0A0B4J1R7 106 aa5.73□□□□□ -1.49
ZNF558-202ENST00000593891 ETDCA0A1B0GVM5 59 aa5.73□□□□□ -1.49
ZNF558-202ENST00000593891 C10orf91Q5T1B1 145 aa5.73□□□□□ -1.49
ZNF558-202ENST00000593891 BORCS7Q96B45 105 aa5.73□□□□□ -1.49
ZNF558-202ENST00000593891 EIF5A2Q9GZV4 153 aaKnown RBP5.73□□□□□ -1.49
ZNF558-202ENST00000593891 IGLV4-3A0A075B6K6 122 aa5.72□□□□□ -1.49
ZNF558-202ENST00000593891 FAM240BA0A1B0GVZ2 78 aa5.72□□□□□ -1.49
ZNF558-202ENST00000593891 Q6ZVH6 145 aa5.72□□□□□ -1.49
ZNF558-202ENST00000593891 AMN1Q8IY45 258 aa5.72□□□□□ -1.49
ZNF558-202ENST00000593891 A8MWL6 223 aa5.71□□□□□ -1.5
ZNF558-202ENST00000593891 PRYO14603 147 aa5.71□□□□□ -1.5
ZNF558-202ENST00000593891 CCL20P78556 96 aa5.71□□□□□ -1.5
ZNF558-202ENST00000593891 RPL7L1Q6DKI1 246 aaKnown RBP5.71□□□□□ -1.5
ZNF558-202ENST00000593891 KCNRGQ8N5I3 272 aa5.71□□□□□ -1.5
ZNF558-202ENST00000593891 PYGO1Q9Y3Y4 419 aa5.71□□□□□ -1.5
ZNF558-202ENST00000593891 C1orf195Q5TG92 126 aa5.7□□□□□ -1.5
ZNF558-202ENST00000593891 Q75L30 129 aa5.7□□□□□ -1.5
ZNF558-202ENST00000593891 COX7B2Q8TF08 81 aa5.7□□□□□ -1.5
ZNF558-202ENST00000593891 SFT2D1Q8WV19 159 aa5.7□□□□□ -1.5
ZNF558-202ENST00000593891 C11orf52Q96A22 123 aa5.7□□□□□ -1.5
ZNF558-202ENST00000593891 C20orf78Q9BR46 151 aa5.7□□□□□ -1.5
ZNF558-202ENST00000593891 SND1-IT1Q9HBX3 110 aa5.7□□□□□ -1.5
ZNF558-202ENST00000593891 A0A1B0GV50 99 aa5.69□□□□□ -1.5
ZNF558-202ENST00000593891 ERC2-IT1O76042 136 aa5.69□□□□□ -1.5
ZNF558-202ENST00000593891 PFN2P35080 140 aa5.69□□□□□ -1.5
ZNF558-202ENST00000593891 CDKN2A-AS1Q9UH64 79 aa5.69□□□□□ -1.5
ZNF558-202ENST00000593891 SPRR1AP35321 89 aa5.68□□□□□ -1.5
ZNF558-202ENST00000593891 HERVK_113P63121 156 aa5.68□□□□□ -1.5
ZNF558-202ENST00000593891 ATP5LO75964 103 aa5.67□□□□□ -1.5
ZNF558-202ENST00000593891 SEC11AP67812 179 aa5.67□□□□□ -1.5
ZNF558-202ENST00000593891 SPRR2FQ96RM1 72 aa5.67□□□□□ -1.5
ZNF558-202ENST00000593891 VCX2Q9H322 139 aa5.67□□□□□ -1.5
ZNF558-202ENST00000593891 TRAV9-1A0A075B6T8 112 aa5.66□□□□□ -1.5
ZNF558-202ENST00000593891 SSNA1O43805 119 aa5.66□□□□□ -1.5
ZNF558-202ENST00000593891 A0A1B0GUT8 65 aa5.65□□□□□ -1.5
ZNF558-202ENST00000593891 SPRR2DP22532 72 aa5.65□□□□□ -1.5
ZNF558-202ENST00000593891 PDZD11Q5EBL8 140 aa5.65□□□□□ -1.5
ZNF558-202ENST00000593891 ZC2HC1BQ5TFG8 222 aa5.65□□□□□ -1.5
ZNF558-202ENST00000593891 Q8NDZ9 215 aa5.65□□□□□ -1.5
ZNF558-202ENST00000593891 GIPP09681 153 aaPredicted RBP5.64□□□□□ -1.51
ZNF558-202ENST00000593891 C2orf66Q6UXQ4 117 aa5.64□□□□□ -1.51
ZNF558-202ENST00000593891 MBD3L1Q8WWY6 194 aa5.64□□□□□ -1.51
ZNF558-202ENST00000593891 SMIM2Q9BVW6 85 aa5.64□□□□□ -1.51
ZNF558-202ENST00000593891 KCNQ1DNQ9H478 68 aa5.64□□□□□ -1.51
ZNF558-202ENST00000593891 RBM12B-AS1Q9P1G2 102 aa5.64□□□□□ -1.51
ZNF558-202ENST00000593891 TRBV24-1A0A075B6N3 115 aa5.63□□□□□ -1.51
ZNF558-202ENST00000593891 A8MWP4 228 aa5.63□□□□□ -1.51
ZNF558-202ENST00000593891 H7C2G1 150 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms