RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 DNAH10Q8IVF4 4471 aa2.81□□□□□ -1.96
SMAD4-216ENST00000593223 STARD9Q9P2P6 4700 aa2.8□□□□□ -1.96
SMAD4-216ENST00000593223 SPTBP11277 2137 aa2.8□□□□□ -1.96
SMAD4-216ENST00000593223 TANC2Q9HCD6 1990 aa2.8□□□□□ -1.96
SMAD4-216ENST00000593223 PLECQ15149 4684 aaKnown RBP2.8□□□□□ -1.96
SMAD4-216ENST00000593223 A0A087WSZ3 146 aa2.8□□□□□ -1.96
SMAD4-216ENST00000593223 IGKV2D-26A0A0A0MRZ7 120 aa2.8□□□□□ -1.96
SMAD4-216ENST00000593223 hADV29S1A0JD25 119 aa2.8□□□□□ -1.96
SMAD4-216ENST00000593223 CFDP00746 253 aaPredicted RBP2.8□□□□□ -1.96
SMAD4-216ENST00000593223 BAALC-AS2P0C853 105 aa2.8□□□□□ -1.96
SMAD4-216ENST00000593223 ZNF22P17026 224 aaPredicted RBP2.8□□□□□ -1.96
SMAD4-216ENST00000593223 FAUP35544 74 aaKnown RBP2.8□□□□□ -1.96
SMAD4-216ENST00000593223 HINT1P49773 126 aaPredicted RBP2.8□□□□□ -1.96
SMAD4-216ENST00000593223 ZNF816Q0VGE8 651 aaPredicted RBP2.8□□□□□ -1.96
SMAD4-216ENST00000593223 OR10AG1Q8NH19 301 aa2.8□□□□□ -1.96
SMAD4-216ENST00000593223 MUCL1Q96DR8 90 aa2.8□□□□□ -1.96
SMAD4-216ENST00000593223 TRGV9Q99603 122 aa2.8□□□□□ -1.96
SMAD4-216ENST00000593223 ANKRD36A6QL64 1941 aa2.8□□□□□ -1.96
SMAD4-216ENST00000593223 IGHV1-18A0A0C4DH31 117 aa2.79□□□□□ -1.96
SMAD4-216ENST00000593223 LOC107984156A0A0G2JMH3 177 aa2.79□□□□□ -1.96
SMAD4-216ENST00000593223 NAP1L6A6NFF2 107 aa2.79□□□□□ -1.96
SMAD4-216ENST00000593223 C11orf86A6NJI1 115 aa2.79□□□□□ -1.96
SMAD4-216ENST00000593223 HMSDA8MTL9 139 aa2.79□□□□□ -1.96
SMAD4-216ENST00000593223 NDUFC1O43677 76 aa2.79□□□□□ -1.96
SMAD4-216ENST00000593223 CRPP02741 224 aa2.79□□□□□ -1.96
SMAD4-216ENST00000593223 DSCR4P56555 118 aaPredicted RBP2.79□□□□□ -1.96
SMAD4-216ENST00000593223 GNGT1P63211 74 aa2.79□□□□□ -1.96
SMAD4-216ENST00000593223 ZNF345Q14585 488 aa2.79□□□□□ -1.96
SMAD4-216ENST00000593223 NNATQ16517 81 aa2.79□□□□□ -1.96
SMAD4-216ENST00000593223 KPRPQ5T749 579 aaPredicted RBP2.79□□□□□ -1.96
SMAD4-216ENST00000593223 C1orf134Q5TEV5 83 aa2.79□□□□□ -1.96
SMAD4-216ENST00000593223 HEPN1Q6WQI6 88 aa2.79□□□□□ -1.96
SMAD4-216ENST00000593223 ARPINQ7Z6K5 226 aa2.79□□□□□ -1.96
SMAD4-216ENST00000593223 ARL17AQ8IVW1 177 aa2.79□□□□□ -1.96
SMAD4-216ENST00000593223 LINC00269Q8N2A0 174 aa2.79□□□□□ -1.96
SMAD4-216ENST00000593223 SERP2Q8N6R1 65 aa2.79□□□□□ -1.96
SMAD4-216ENST00000593223 ST20-AS1Q8NBB2 130 aa2.79□□□□□ -1.96
SMAD4-216ENST00000593223 KLF14Q8TD94 323 aaPredicted RBP2.79□□□□□ -1.96
SMAD4-216ENST00000593223 SCRT1Q9BWW7 348 aa2.79□□□□□ -1.96
SMAD4-216ENST00000593223 MUC2Q02817 5179 aa2.79□□□□□ -1.96
SMAD4-216ENST00000593223 PLCE1Q9P212 2302 aa2.79□□□□□ -1.96
SMAD4-216ENST00000593223 IGLV10-54A0A075B6I4 117 aa2.78□□□□□ -1.96
SMAD4-216ENST00000593223 IGHV3-64A0A075B6Q5 118 aa2.78□□□□□ -1.96
SMAD4-216ENST00000593223 A0A1B0GU33 70 aa2.78□□□□□ -1.96
SMAD4-216ENST00000593223 A0A1W2PPM0 123 aa2.78□□□□□ -1.96
SMAD4-216ENST00000593223 A6NIN4 97 aa2.78□□□□□ -1.96
SMAD4-216ENST00000593223 DEFB108AA8MXU0 73 aa2.78□□□□□ -1.96
SMAD4-216ENST00000593223 E7EUB6 86 aa2.78□□□□□ -1.96
SMAD4-216ENST00000593223 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
SMAD4-216ENST00000593223 IL4P05112 153 aa2.78□□□□□ -1.96
SMAD4-216ENST00000593223 ADCYAP1P18509 176 aa2.78□□□□□ -1.96
SMAD4-216ENST00000593223 RHOHQ15669 191 aa2.78□□□□□ -1.96
SMAD4-216ENST00000593223 CASC2Q6XLA1 102 aa2.78□□□□□ -1.96
SMAD4-216ENST00000593223 FAM19A2Q8N3H0 131 aa2.78□□□□□ -1.96
SMAD4-216ENST00000593223 UBALD1Q8TB05 177 aa2.78□□□□□ -1.96
SMAD4-216ENST00000593223 FAM213BQ8TBF2 198 aa2.78□□□□□ -1.96
SMAD4-216ENST00000593223 NDUFA12Q9UI09 145 aa2.78□□□□□ -1.96
SMAD4-216ENST00000593223 ANKRD12Q6UB98 2062 aa2.78□□□□□ -1.96
SMAD4-216ENST00000593223 RNF213Q63HN8 5207 aa2.78□□□□□ -1.96
SMAD4-216ENST00000593223 TRAV3A0A0B4J244 114 aa2.77□□□□□ -1.97
SMAD4-216ENST00000593223 KANTRA0A1W2PQU2 76 aa2.77□□□□□ -1.97
SMAD4-216ENST00000593223 B4DSR2 109 aa2.77□□□□□ -1.97
SMAD4-216ENST00000593223 MGST1P10620 155 aaKnown RBP2.77□□□□□ -1.97
SMAD4-216ENST00000593223 RBM3P98179 157 aaKnown RBP2.77□□□□□ -1.97
SMAD4-216ENST00000593223 BVES-AS1Q5T3Y7 98 aa2.77□□□□□ -1.97
SMAD4-216ENST00000593223 RPL7L1Q6DKI1 246 aaKnown RBP2.77□□□□□ -1.97
SMAD4-216ENST00000593223 ZNF826PQ6ZT77 177 aa2.77□□□□□ -1.97
SMAD4-216ENST00000593223 Q8NAQ8 132 aa2.77□□□□□ -1.97
SMAD4-216ENST00000593223 DNAJC13O75165 2243 aa2.77□□□□□ -1.97
SMAD4-216ENST00000593223 PRR14LQ5THK1 2151 aa2.77□□□□□ -1.97
SMAD4-216ENST00000593223 MUC4Q99102 2169 aa2.77□□□□□ -1.97
SMAD4-216ENST00000593223 KMT2AQ03164 3969 aa2.76□□□□□ -1.97
SMAD4-216ENST00000593223 KIAA1549Q9HCM3 1950 aa2.76□□□□□ -1.97
SMAD4-216ENST00000593223 ZNF407Q9C0G0 2248 aa2.76□□□□□ -1.97
SMAD4-216ENST00000593223 ALPK2Q86TB3 2170 aa2.76□□□□□ -1.97
SMAD4-216ENST00000593223 NUPR1O60356 82 aa2.76□□□□□ -1.97
SMAD4-216ENST00000593223 DEFA4P12838 97 aa2.76□□□□□ -1.97
SMAD4-216ENST00000593223 GNG11P61952 73 aa2.76□□□□□ -1.97
SMAD4-216ENST00000593223 CYP4F30PQ9H0H9 118 aa2.76□□□□□ -1.97
SMAD4-216ENST00000593223 NDUFB11Q9NX14 153 aa2.76□□□□□ -1.97
SMAD4-216ENST00000593223 IGKV1D-17A0A075B6S4 117 aa2.75□□□□□ -1.97
SMAD4-216ENST00000593223 MIFP14174 115 aa2.75□□□□□ -1.97
SMAD4-216ENST00000593223 MOBPQ13875 183 aa2.75□□□□□ -1.97
SMAD4-216ENST00000593223 ETDBQ3ZM63 59 aa2.75□□□□□ -1.97
SMAD4-216ENST00000593223 C9orf116Q5BN46 136 aaPredicted RBP2.75□□□□□ -1.97
SMAD4-216ENST00000593223 NMSQ5H8A3 153 aa2.75□□□□□ -1.97
SMAD4-216ENST00000593223 SLC48A1Q6P1K1 146 aa2.75□□□□□ -1.97
SMAD4-216ENST00000593223 OR8B3Q8NGG8 313 aa2.75□□□□□ -1.97
SMAD4-216ENST00000593223 TMEM254Q8TBM7 123 aa2.75□□□□□ -1.97
SMAD4-216ENST00000593223 C20orf166-AS1Q96NR2 134 aa2.75□□□□□ -1.97
SMAD4-216ENST00000593223 OR8B2Q96RD0 313 aa2.75□□□□□ -1.97
SMAD4-216ENST00000593223 DMBT1Q9UGM3 2413 aaPredicted RBP2.75□□□□□ -1.97
SMAD4-216ENST00000593223 CPAMD8Q8IZJ3 1885 aa2.75□□□□□ -1.97
SMAD4-216ENST00000593223 IGKV1D-42A0A075B6H8 117 aa2.74□□□□□ -1.97
SMAD4-216ENST00000593223 SYS1-DBNDD2H3BUS1 97 aa2.74□□□□□ -1.97
SMAD4-216ENST00000593223 BCE1O60756 84 aa2.74□□□□□ -1.97
SMAD4-216ENST00000593223 RNASE2P10153 161 aaKnown RBP2.74□□□□□ -1.97
SMAD4-216ENST00000593223 UBE2G1P62253 170 aa2.74□□□□□ -1.97
SMAD4-216ENST00000593223 PMCHL1Q16048 86 aa2.74□□□□□ -1.97
SMAD4-216ENST00000593223 LY6EQ16553 131 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms