RNA–Protein interactions for RNA: ENST00000592632.5

DDX39A-218, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-218ENST00000592632 BAGE3Q86Y29 109 aa8.18□□□□□ -1.1
DDX39A-218ENST00000592632 TOMM7Q9P0U1 55 aa8.18□□□□□ -1.1
DDX39A-218ENST00000592632 SMIM1B2RUZ4 78 aa8.17□□□□□ -1.1
DDX39A-218ENST00000592632 TLX1NBP0CAT3 122 aa8.17□□□□□ -1.1
DDX39A-218ENST00000592632 IGLC3P0DOY3 106 aa8.17□□□□□ -1.1
DDX39A-218ENST00000592632 LINC00310P59036 64 aa8.17□□□□□ -1.1
DDX39A-218ENST00000592632 C6orf226Q5I0X4 101 aa8.17□□□□□ -1.1
DDX39A-218ENST00000592632 Q8IZM0 81 aa8.17□□□□□ -1.1
DDX39A-218ENST00000592632 FAM19A2Q8N3H0 131 aa8.17□□□□□ -1.1
DDX39A-218ENST00000592632 PACRGQ96M98 296 aaPredicted RBP8.17□□□□□ -1.1
DDX39A-218ENST00000592632 A0A1W2PNN7 141 aa8.16□□□□□ -1.1
DDX39A-218ENST00000592632 PRSS2P07478 247 aa8.16□□□□□ -1.1
DDX39A-218ENST00000592632 TRBV30A0A0K0K1B3 111 aa8.15□□□□□ -1.1
DDX39A-218ENST00000592632 J3QL48 77 aa8.15□□□□□ -1.1
DDX39A-218ENST00000592632 NUPR1O60356 82 aa8.15□□□□□ -1.1
DDX39A-218ENST00000592632 SPINK8P0C7L1 97 aa8.15□□□□□ -1.1
DDX39A-218ENST00000592632 RPL37AP61513 92 aaKnown RBP8.15□□□□□ -1.1
DDX39A-218ENST00000592632 RPL18AQ02543 176 aaKnown RBP8.15□□□□□ -1.1
DDX39A-218ENST00000592632 C9orf116Q5BN46 136 aaPredicted RBP8.15□□□□□ -1.1
DDX39A-218ENST00000592632 Q6ZRP5 223 aa8.15□□□□□ -1.1
DDX39A-218ENST00000592632 HSBP1O75506 76 aa8.14□□□□□ -1.11
DDX39A-218ENST00000592632 SERF1AO75920 110 aa8.14□□□□□ -1.11
DDX39A-218ENST00000592632 CKS1BP61024 79 aa8.14□□□□□ -1.11
DDX39A-218ENST00000592632 IFI27L1Q96BM0 104 aa8.14□□□□□ -1.11
DDX39A-218ENST00000592632 ZNF22P17026 224 aaPredicted RBP8.13□□□□□ -1.11
DDX39A-218ENST00000592632 COX7B2Q8TF08 81 aa8.13□□□□□ -1.11
DDX39A-218ENST00000592632 TRAV12-1A0A0B4J245 112 aa8.12□□□□□ -1.11
DDX39A-218ENST00000592632 IGLV5-39A0A0G2JS06 123 aa8.12□□□□□ -1.11
DDX39A-218ENST00000592632 C11orf86A6NJI1 115 aa8.12□□□□□ -1.11
DDX39A-218ENST00000592632 H3BRM9 83 aa8.12□□□□□ -1.11
DDX39A-218ENST00000592632 GAGE2EQ4V326 116 aa8.12□□□□□ -1.11
DDX39A-218ENST00000592632 GAGE2DQ9UEU5 116 aa8.12□□□□□ -1.11
DDX39A-218ENST00000592632 CHTOPQ9Y3Y2 248 aaKnown RBP8.12□□□□□ -1.11
DDX39A-218ENST00000592632 LRP1Q07954 4544 aaKnown RBP8.11□□□□□ -1.11
DDX39A-218ENST00000592632 NDUFC2-KCTD14E9PQ53 114 aa8.11□□□□□ -1.11
DDX39A-218ENST00000592632 F8VRH5 84 aa8.11□□□□□ -1.11
DDX39A-218ENST00000592632 HNRNPA3P51991 378 aaKnown RBP8.11□□□□□ -1.11
DDX39A-218ENST00000592632 C7orf33Q8WU49 177 aa8.11□□□□□ -1.11
DDX39A-218ENST00000592632 FAM168BA1KXE4 195 aa8.1□□□□□ -1.11
DDX39A-218ENST00000592632 CXCL5P42830 114 aa8.1□□□□□ -1.11
DDX39A-218ENST00000592632 HIST1H2BKO60814 126 aa8.09□□□□□ -1.11
DDX39A-218ENST00000592632 LEPROTL1O95214 131 aa8.09□□□□□ -1.11
DDX39A-218ENST00000592632 HIST1H2BJP06899 126 aa8.09□□□□□ -1.11
DDX39A-218ENST00000592632 HIST1H2BOP23527 126 aa8.09□□□□□ -1.11
DDX39A-218ENST00000592632 HIST1H2BBP33778 126 aa8.09□□□□□ -1.11
DDX39A-218ENST00000592632 HIST1H2BDP58876 126 aa8.09□□□□□ -1.11
DDX39A-218ENST00000592632 HIST1H2BCP62807 126 aa8.09□□□□□ -1.11
DDX39A-218ENST00000592632 HIST2H2BEQ16778 126 aa8.09□□□□□ -1.11
DDX39A-218ENST00000592632 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.09□□□□□ -1.11
DDX39A-218ENST00000592632 C9orf129Q5T035 196 aaKnown RBP8.09□□□□□ -1.11
DDX39A-218ENST00000592632 KRTAP7-1Q8IUC3 87 aa8.09□□□□□ -1.11
DDX39A-218ENST00000592632 HIST1H2BHQ93079 126 aa8.09□□□□□ -1.11
DDX39A-218ENST00000592632 HIST1H2BNQ99877 126 aa8.09□□□□□ -1.11
DDX39A-218ENST00000592632 HIST1H2BMQ99879 126 aa8.09□□□□□ -1.11
DDX39A-218ENST00000592632 FAT3Q8TDW7 4589 aa8.09□□□□□ -1.11
DDX39A-218ENST00000592632 TMEM170BQ5T4T1 132 aa8.08□□□□□ -1.12
DDX39A-218ENST00000592632 PHF5AQ7RTV0 110 aaKnown RBP8.08□□□□□ -1.12
DDX39A-218ENST00000592632 FABP4P15090 132 aa8.07□□□□□ -1.12
DDX39A-218ENST00000592632 TMEM223A0PJW6 202 aa8.06□□□□□ -1.12
DDX39A-218ENST00000592632 PRR3P79522 188 aaKnown RBP8.06□□□□□ -1.12
DDX39A-218ENST00000592632 ODF1Q14990 250 aa8.06□□□□□ -1.12
DDX39A-218ENST00000592632 FAM19A5Q7Z5A7 132 aaPredicted RBP8.05□□□□□ -1.12
DDX39A-218ENST00000592632 XAGE1AQ9HD64 81 aa8.05□□□□□ -1.12
DDX39A-218ENST00000592632 HSPB8Q9UJY1 196 aa8.05□□□□□ -1.12
DDX39A-218ENST00000592632 H0Y8G0 127 aa8.04□□□□□ -1.12
DDX39A-218ENST00000592632 S100A1P23297 94 aa8.04□□□□□ -1.12
DDX39A-218ENST00000592632 KRTAP11-1Q8IUC1 163 aa8.04□□□□□ -1.12
DDX39A-218ENST00000592632 KRTAP29-1A8MX34 341 aaPredicted RBP8.03□□□□□ -1.12
DDX39A-218ENST00000592632 SERTAD4-AS1Q5TG53 156 aa8.03□□□□□ -1.12
DDX39A-218ENST00000592632 ATP6V1G1O75348 118 aa8.02□□□□□ -1.13
DDX39A-218ENST00000592632 ZNF625Q96I27 306 aaPredicted RBP8.02□□□□□ -1.13
DDX39A-218ENST00000592632 PSORS1C2Q9UIG4 136 aa8.02□□□□□ -1.13
DDX39A-218ENST00000592632 SRSF9Q13242 221 aaKnown RBP eCLIP8.01□□□□□ -1.13
DDX39A-218ENST00000592632 COA6Q5JTJ3 125 aaKnown RBP8.01□□□□□ -1.13
DDX39A-218ENST00000592632 M0QXV9 152 aa8□□□□□ -1.13
DDX39A-218ENST00000592632 OXTP01178 125 aa8□□□□□ -1.13
DDX39A-218ENST00000592632 PFN2P35080 140 aa8□□□□□ -1.13
DDX39A-218ENST00000592632 PMCHL2Q9BQD1 86 aa8□□□□□ -1.13
DDX39A-218ENST00000592632 MAP1LC3CQ9BXW4 147 aa8□□□□□ -1.13
DDX39A-218ENST00000592632 ERG28Q9UKR5 140 aa8□□□□□ -1.13
DDX39A-218ENST00000592632 C22orf24Q9Y442 160 aa8□□□□□ -1.13
DDX39A-218ENST00000592632 DPM2O94777 84 aa7.99□□□□□ -1.13
DDX39A-218ENST00000592632 PLA2G2DQ9UNK4 145 aa7.99□□□□□ -1.13
DDX39A-218ENST00000592632 PLNP26678 52 aa7.98□□□□□ -1.13
DDX39A-218ENST00000592632 COX17Q14061 63 aa7.98□□□□□ -1.13
DDX39A-218ENST00000592632 SFTA2Q6UW10 78 aa7.98□□□□□ -1.13
DDX39A-218ENST00000592632 SYS1-DBNDD2H3BUS1 97 aa7.97□□□□□ -1.13
DDX39A-218ENST00000592632 IGKCP01834 107 aa7.97□□□□□ -1.13
DDX39A-218ENST00000592632 C1orf137Q5JT78 98 aa7.97□□□□□ -1.13
DDX39A-218ENST00000592632 LEPROTO15243 131 aa7.96□□□□□ -1.14
DDX39A-218ENST00000592632 TSPEAR-AS2P59090 65 aa7.96□□□□□ -1.14
DDX39A-218ENST00000592632 LBHQ53QV2 105 aaPredicted RBP7.96□□□□□ -1.14
DDX39A-218ENST00000592632 SPINK6Q6UWN8 80 aa7.96□□□□□ -1.14
DDX39A-218ENST00000592632 SND1-IT1Q9HBX3 110 aa7.96□□□□□ -1.14
DDX39A-218ENST00000592632 TP73-AS1Q9UF72 201 aa7.96□□□□□ -1.14
DDX39A-218ENST00000592632 TNXBP22105 4242 aa7.95□□□□□ -1.14
DDX39A-218ENST00000592632 IGLV5-37A0A075B6J1 123 aa7.95□□□□□ -1.14
DDX39A-218ENST00000592632 UBE2BP63146 152 aa7.95□□□□□ -1.14
DDX39A-218ENST00000592632 NDUFA12Q9UI09 145 aa7.95□□□□□ -1.14
DDX39A-218ENST00000592632 IGLV7-43P04211 117 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms