RNA–Protein interactions for RNA: ENST00000591880.2

GFAP-220, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-220ENST00000591880 TRAPPC1Q9Y5R8 145 aa6.93□□□□□ -1.3
GFAP-220ENST00000591880 LRP1Q07954 4544 aaKnown RBP6.93□□□□□ -1.3
GFAP-220ENST00000591880 A0A0J9YXV3 536 aa6.92□□□□□ -1.3
GFAP-220ENST00000591880 CKS1BP61024 79 aa6.92□□□□□ -1.3
GFAP-220ENST00000591880 UNQ6190/PRO20217Q6UXQ8 127 aa6.92□□□□□ -1.3
GFAP-220ENST00000591880 TOMM7Q9P0U1 55 aa6.92□□□□□ -1.3
GFAP-220ENST00000591880 TINCRA0A1B0GVN0 87 aa6.91□□□□□ -1.3
GFAP-220ENST00000591880 NDUFC2-KCTD14E9PQ53 114 aa6.91□□□□□ -1.3
GFAP-220ENST00000591880 C10orf25Q5T742 122 aa6.91□□□□□ -1.3
GFAP-220ENST00000591880 ZC2HC1BQ5TFG8 222 aa6.91□□□□□ -1.3
GFAP-220ENST00000591880 SERTAD4-AS1Q5TG53 156 aa6.91□□□□□ -1.3
GFAP-220ENST00000591880 SPINK6Q6UWN8 80 aa6.91□□□□□ -1.3
GFAP-220ENST00000591880 A0A1W2PNN7 141 aa6.9□□□□□ -1.3
GFAP-220ENST00000591880 RAB5BP61020 215 aa6.9□□□□□ -1.3
GFAP-220ENST00000591880 PMVKQ15126 192 aa6.9□□□□□ -1.3
GFAP-220ENST00000591880 C6orf226Q5I0X4 101 aa6.9□□□□□ -1.3
GFAP-220ENST00000591880 LINC00469Q8N7U9 141 aa6.9□□□□□ -1.3
GFAP-220ENST00000591880 CDKN2A-AS1Q9UH64 79 aa6.9□□□□□ -1.3
GFAP-220ENST00000591880 IGLV5-45A0A087WSX0 123 aa6.89□□□□□ -1.31
GFAP-220ENST00000591880 F8VRH5 84 aa6.89□□□□□ -1.31
GFAP-220ENST00000591880 GAGE2EQ4V326 116 aa6.89□□□□□ -1.31
GFAP-220ENST00000591880 REG3GQ6UW15 175 aa6.89□□□□□ -1.31
GFAP-220ENST00000591880 C18orf32Q8TCD1 76 aa6.89□□□□□ -1.31
GFAP-220ENST00000591880 GAGE2DQ9UEU5 116 aa6.89□□□□□ -1.31
GFAP-220ENST00000591880 H3BRM9 83 aa6.88□□□□□ -1.31
GFAP-220ENST00000591880 HBDP02042 147 aa6.88□□□□□ -1.31
GFAP-220ENST00000591880 TRGC2P03986 189 aa6.88□□□□□ -1.31
GFAP-220ENST00000591880 LINC00614P0C842 121 aa6.88□□□□□ -1.31
GFAP-220ENST00000591880 PDZD11Q5EBL8 140 aa6.88□□□□□ -1.31
GFAP-220ENST00000591880 C2orf82Q6UX34 121 aa6.88□□□□□ -1.31
GFAP-220ENST00000591880 CST9LQ9H4G1 147 aa6.88□□□□□ -1.31
GFAP-220ENST00000591880 SMIM1B2RUZ4 78 aa6.87□□□□□ -1.31
GFAP-220ENST00000591880 PHF5AQ7RTV0 110 aaKnown RBP6.87□□□□□ -1.31
GFAP-220ENST00000591880 FAM19A5Q7Z5A7 132 aaPredicted RBP6.87□□□□□ -1.31
GFAP-220ENST00000591880 M0QXV9 152 aa6.86□□□□□ -1.31
GFAP-220ENST00000591880 ATP5LO75964 103 aa6.86□□□□□ -1.31
GFAP-220ENST00000591880 ODF1Q14990 250 aa6.86□□□□□ -1.31
GFAP-220ENST00000591880 PSORS1C2Q9UIG4 136 aa6.86□□□□□ -1.31
GFAP-220ENST00000591880 IGLC3P0DOY3 106 aa6.85□□□□□ -1.31
GFAP-220ENST00000591880 UBE2BP63146 152 aa6.85□□□□□ -1.31
GFAP-220ENST00000591880 C1orf137Q5JT78 98 aa6.85□□□□□ -1.31
GFAP-220ENST00000591880 COX7B2Q8TF08 81 aa6.85□□□□□ -1.31
GFAP-220ENST00000591880 A0A096LNJ9 63 aa6.84□□□□□ -1.31
GFAP-220ENST00000591880 FAM168BA1KXE4 195 aa6.84□□□□□ -1.31
GFAP-220ENST00000591880 HIST1H2BKO60814 126 aa6.84□□□□□ -1.31
GFAP-220ENST00000591880 HIST1H2BJP06899 126 aa6.84□□□□□ -1.31
GFAP-220ENST00000591880 HIST1H2BOP23527 126 aa6.84□□□□□ -1.31
GFAP-220ENST00000591880 HIST1H2BBP33778 126 aa6.84□□□□□ -1.31
GFAP-220ENST00000591880 HIST1H2BDP58876 126 aa6.84□□□□□ -1.31
GFAP-220ENST00000591880 HIST1H2BCP62807 126 aa6.84□□□□□ -1.31
GFAP-220ENST00000591880 HIST2H2BEQ16778 126 aa6.84□□□□□ -1.31
GFAP-220ENST00000591880 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.84□□□□□ -1.31
GFAP-220ENST00000591880 SFTA2Q6UW10 78 aa6.84□□□□□ -1.31
GFAP-220ENST00000591880 HIST1H2BHQ93079 126 aa6.84□□□□□ -1.31
GFAP-220ENST00000591880 CHCHD1Q96BP2 118 aaKnown RBP6.84□□□□□ -1.31
GFAP-220ENST00000591880 URB1-AS1Q96HZ7 61 aa6.84□□□□□ -1.31
GFAP-220ENST00000591880 LINC01600Q96MT4 127 aa6.84□□□□□ -1.31
GFAP-220ENST00000591880 HIST1H2BNQ99877 126 aa6.84□□□□□ -1.31
GFAP-220ENST00000591880 HIST1H2BMQ99879 126 aa6.84□□□□□ -1.31
GFAP-220ENST00000591880 SPINK8P0C7L1 97 aa6.83□□□□□ -1.32
GFAP-220ENST00000591880 MT1HL1P0DM35 61 aa6.83□□□□□ -1.32
GFAP-220ENST00000591880 NDUFA6P56556 154 aa6.83□□□□□ -1.32
GFAP-220ENST00000591880 SRSF9Q13242 221 aaKnown RBP eCLIP6.83□□□□□ -1.32
GFAP-220ENST00000591880 C9orf129Q5T035 196 aaKnown RBP6.83□□□□□ -1.32
GFAP-220ENST00000591880 C5orf52A6NGY3 159 aa6.82□□□□□ -1.32
GFAP-220ENST00000591880 S100A6P06703 90 aa6.82□□□□□ -1.32
GFAP-220ENST00000591880 LBHQ53QV2 105 aaPredicted RBP6.82□□□□□ -1.32
GFAP-220ENST00000591880 COA6Q5JTJ3 125 aaKnown RBP6.82□□□□□ -1.32
GFAP-220ENST00000591880 HMCN2Q8NDA2 5059 aa6.82□□□□□ -1.32
GFAP-220ENST00000591880 TNXBP22105 4242 aa6.81□□□□□ -1.32
GFAP-220ENST00000591880 LOC105371267A0A1B0GV96 52 aa6.81□□□□□ -1.32
GFAP-220ENST00000591880 IGLV7-43P04211 117 aa6.81□□□□□ -1.32
GFAP-220ENST00000591880 ZNF22P17026 224 aaPredicted RBP6.81□□□□□ -1.32
GFAP-220ENST00000591880 PMCHL1Q16048 86 aa6.81□□□□□ -1.32
GFAP-220ENST00000591880 DIRC1Q969H9 104 aa6.81□□□□□ -1.32
GFAP-220ENST00000591880 TP73-AS1Q9UF72 201 aa6.81□□□□□ -1.32
GFAP-220ENST00000591880 IGLV5-39A0A0G2JS06 123 aa6.8□□□□□ -1.32
GFAP-220ENST00000591880 NUPR1O60356 82 aa6.8□□□□□ -1.32
GFAP-220ENST00000591880 PLA2G2DQ9UNK4 145 aa6.8□□□□□ -1.32
GFAP-220ENST00000591880 TRAV12-1A0A0B4J245 112 aa6.79□□□□□ -1.32
GFAP-220ENST00000591880 HSBP1O75506 76 aa6.79□□□□□ -1.32
GFAP-220ENST00000591880 SNRPEP62304 92 aaKnown RBP6.79□□□□□ -1.32
GFAP-220ENST00000591880 BAGE3Q86Y29 109 aa6.79□□□□□ -1.32
GFAP-220ENST00000591880 XAGE1AQ9HD64 81 aa6.79□□□□□ -1.32
GFAP-220ENST00000591880 C22orf24Q9Y442 160 aa6.79□□□□□ -1.32
GFAP-220ENST00000591880 H0Y9J4 135 aa6.78□□□□□ -1.32
GFAP-220ENST00000591880 TMEM170BQ5T4T1 132 aa6.78□□□□□ -1.32
GFAP-220ENST00000591880 MRPL55Q7Z7F7 128 aaKnown RBP6.78□□□□□ -1.32
GFAP-220ENST00000591880 KRTAP7-1Q8IUC3 87 aa6.78□□□□□ -1.32
GFAP-220ENST00000591880 CHTOPQ9Y3Y2 248 aaKnown RBP6.78□□□□□ -1.32
GFAP-220ENST00000591880 C11orf86A6NJI1 115 aa6.77□□□□□ -1.33
GFAP-220ENST00000591880 COX17Q14061 63 aa6.77□□□□□ -1.33
GFAP-220ENST00000591880 IFI27L1Q96BM0 104 aa6.77□□□□□ -1.33
GFAP-220ENST00000591880 IGLV5-37A0A075B6J1 123 aa6.76□□□□□ -1.33
GFAP-220ENST00000591880 LINC00310P59036 64 aa6.75□□□□□ -1.33
GFAP-220ENST00000591880 KRTAP11-1Q8IUC1 163 aa6.75□□□□□ -1.33
GFAP-220ENST00000591880 HIST3H2BBQ8N257 126 aa6.75□□□□□ -1.33
GFAP-220ENST00000591880 NKAPP1Q8N9T2 125 aa6.75□□□□□ -1.33
GFAP-220ENST00000591880 ERG28Q9UKR5 140 aa6.75□□□□□ -1.33
GFAP-220ENST00000591880 A6NJY4 79 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms