RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 LINC01620Q4KN68 170 aa14.89□□□□□ -0.03
LSM7-206ENST00000591515 CHAC1Q9BUX1 264 aa14.89□□□□□ -0.03
LSM7-206ENST00000591515 IGLV5-45A0A087WSX0 123 aa14.88□□□□□ -0.03
LSM7-206ENST00000591515 NDUFA1O15239 70 aa14.88□□□□□ -0.03
LSM7-206ENST00000591515 OXTP01178 125 aa14.88□□□□□ -0.03
LSM7-206ENST00000591515 KRTAP10-4P60372 401 aaPredicted RBP14.88□□□□□ -0.03
LSM7-206ENST00000591515 LINC00526Q96FQ7 95 aa14.88□□□□□ -0.03
LSM7-206ENST00000591515 CHTOPQ9Y3Y2 248 aaKnown RBP14.88□□□□□ -0.03
LSM7-206ENST00000591515 PKHD1L1Q86WI1 4243 aa14.88□□□□□ -0.03
LSM7-206ENST00000591515 SDIM1Q6ZPB5 146 aa14.85□□□□□ -0.03
LSM7-206ENST00000591515 TOMM7Q9P0U1 55 aa14.85□□□□□ -0.03
LSM7-206ENST00000591515 NUPR1O60356 82 aa14.84□□□□□ -0.03
LSM7-206ENST00000591515 FABP4P15090 132 aa14.84□□□□□ -0.03
LSM7-206ENST00000591515 RNF151Q2KHN1 245 aa14.84□□□□□ -0.03
LSM7-206ENST00000591515 C6orf226Q5I0X4 101 aa14.84□□□□□ -0.03
LSM7-206ENST00000591515 Q8IZM0 81 aa14.84□□□□□ -0.03
LSM7-206ENST00000591515 CKS1BP61024 79 aa14.83□□□□□ -0.04
LSM7-206ENST00000591515 Q6ZRU5 148 aa14.83□□□□□ -0.04
LSM7-206ENST00000591515 MRPL35Q9NZE8 188 aaKnown RBP14.83□□□□□ -0.04
LSM7-206ENST00000591515 F8VRH5 84 aa14.82□□□□□ -0.04
LSM7-206ENST00000591515 CXCL5P42830 114 aa14.82□□□□□ -0.04
LSM7-206ENST00000591515 COA6Q5JTJ3 125 aaKnown RBP14.82□□□□□ -0.04
LSM7-206ENST00000591515 MAP1LC3CQ9BXW4 147 aa14.82□□□□□ -0.04
LSM7-206ENST00000591515 SMIM1B2RUZ4 78 aa14.81□□□□□ -0.04
LSM7-206ENST00000591515 SCXQ7RTU7 201 aa14.81□□□□□ -0.04
LSM7-206ENST00000591515 LINC00474Q9P2X8 69 aa14.81□□□□□ -0.04
LSM7-206ENST00000591515 LOC107984640A0A0U1RRK4 108 aa14.8□□□□□ -0.04
LSM7-206ENST00000591515 KIAA0087Q14695 138 aa14.8□□□□□ -0.04
LSM7-206ENST00000591515 TMEM170BQ5T4T1 132 aa14.8□□□□□ -0.04
LSM7-206ENST00000591515 RNF213Q63HN8 5207 aa14.79□□□□□ -0.04
LSM7-206ENST00000591515 TRBV30A0A0K0K1B3 111 aa14.79□□□□□ -0.04
LSM7-206ENST00000591515 H0Y8G0 127 aa14.79□□□□□ -0.04
LSM7-206ENST00000591515 ZNF22P17026 224 aaPredicted RBP14.79□□□□□ -0.04
LSM7-206ENST00000591515 DPH3Q96FX2 82 aa14.79□□□□□ -0.04
LSM7-206ENST00000591515 C11orf86A6NJI1 115 aa14.78□□□□□ -0.04
LSM7-206ENST00000591515 SPINK8P0C7L1 97 aa14.78□□□□□ -0.04
LSM7-206ENST00000591515 COX7B2Q8TF08 81 aa14.78□□□□□ -0.04
LSM7-206ENST00000591515 UNQ6190/PRO20217Q6UXQ8 127 aa14.76□□□□□ -0.05
LSM7-206ENST00000591515 PLNP26678 52 aa14.75□□□□□ -0.05
LSM7-206ENST00000591515 ODF1Q14990 250 aa14.75□□□□□ -0.05
LSM7-206ENST00000591515 IGKV2-24A0A0C4DH68 120 aa14.73□□□□□ -0.05
LSM7-206ENST00000591515 CIRBPQ14011 172 aaKnown RBP14.73□□□□□ -0.05
LSM7-206ENST00000591515 C2orf82Q6UX34 121 aa14.73□□□□□ -0.05
LSM7-206ENST00000591515 C6orf48Q9UBA6 75 aa14.73□□□□□ -0.05
LSM7-206ENST00000591515 LRP2P98164 4655 aa14.73□□□□□ -0.05
LSM7-206ENST00000591515 S100A6P06703 90 aa14.72□□□□□ -0.05
LSM7-206ENST00000591515 RPL18AQ02543 176 aaKnown RBP14.72□□□□□ -0.05
LSM7-206ENST00000591515 SFTA2Q6UW10 78 aa14.72□□□□□ -0.05
LSM7-206ENST00000591515 SPACA4Q8TDM5 124 aa14.72□□□□□ -0.05
LSM7-206ENST00000591515 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.72□□□□□ -0.05
LSM7-206ENST00000591515 IGLV5-39A0A0G2JS06 123 aa14.71□□□□□ -0.05
LSM7-206ENST00000591515 DPM2O94777 84 aa14.71□□□□□ -0.05
LSM7-206ENST00000591515 TLX1NBP0CAT3 122 aa14.71□□□□□ -0.05
LSM7-206ENST00000591515 GAGE2BQ13066 116 aa14.71□□□□□ -0.05
LSM7-206ENST00000591515 MAJINQ3KP22 176 aa14.71□□□□□ -0.05
LSM7-206ENST00000591515 C10orf25Q5T742 122 aa14.71□□□□□ -0.05
LSM7-206ENST00000591515 CIRBP-AS1Q8TBR5 109 aa14.71□□□□□ -0.05
LSM7-206ENST00000591515 A0A096LNI7 61 aa14.7□□□□□ -0.06
LSM7-206ENST00000591515 PTTG1IPP53801 180 aa14.7□□□□□ -0.06
LSM7-206ENST00000591515 SYS1-DBNDD2H3BUS1 97 aa14.69□□□□□ -0.06
LSM7-206ENST00000591515 CHTF8P0CG12 524 aa14.69□□□□□ -0.06
LSM7-206ENST00000591515 TMEM223A0PJW6 202 aa14.68□□□□□ -0.06
LSM7-206ENST00000591515 HERVK_113P61574 105 aa14.68□□□□□ -0.06
LSM7-206ENST00000591515 PET117Q6UWS5 81 aa14.68□□□□□ -0.06
LSM7-206ENST00000591515 NDUFC2-KCTD14E9PQ53 114 aa14.67□□□□□ -0.06
LSM7-206ENST00000591515 IGKCP01834 107 aa14.67□□□□□ -0.06
LSM7-206ENST00000591515 S100A2P29034 98 aa14.67□□□□□ -0.06
LSM7-206ENST00000591515 A0A087WYN8 130 aa14.65□□□□□ -0.06
LSM7-206ENST00000591515 HNRNPA3P51991 378 aaKnown RBP14.65□□□□□ -0.06
LSM7-206ENST00000591515 STPG4Q8N801 248 aa14.65□□□□□ -0.06
LSM7-206ENST00000591515 TNXBP22105 4242 aa14.64□□□□□ -0.07
LSM7-206ENST00000591515 C20orf202A1L168 122 aa14.64□□□□□ -0.07
LSM7-206ENST00000591515 PANO1I0J062 215 aa14.64□□□□□ -0.07
LSM7-206ENST00000591515 AKR1D1P51857 326 aa14.64□□□□□ -0.07
LSM7-206ENST00000591515 PLAC8Q9NZF1 115 aa14.64□□□□□ -0.07
LSM7-206ENST00000591515 MT1HL1P0DM35 61 aa14.62□□□□□ -0.07
LSM7-206ENST00000591515 KRTDAPP60985 99 aa14.62□□□□□ -0.07
LSM7-206ENST00000591515 PMCHL2Q9BQD1 86 aa14.62□□□□□ -0.07
LSM7-206ENST00000591515 GAGE2EQ4V326 116 aa14.61□□□□□ -0.07
LSM7-206ENST00000591515 Q6ZRP5 223 aa14.61□□□□□ -0.07
LSM7-206ENST00000591515 GAGE2DQ9UEU5 116 aa14.61□□□□□ -0.07
LSM7-206ENST00000591515 C3orf79P0CE67 100 aa14.6□□□□□ -0.07
LSM7-206ENST00000591515 C9orf116Q5BN46 136 aaPredicted RBP14.6□□□□□ -0.07
LSM7-206ENST00000591515 LINC01545Q5VT33 79 aa14.6□□□□□ -0.07
LSM7-206ENST00000591515 PLEKHB2Q96CS7 222 aa14.6□□□□□ -0.07
LSM7-206ENST00000591515 C7orf33Q8WU49 177 aa14.59□□□□□ -0.07
LSM7-206ENST00000591515 RPL37AP61513 92 aaKnown RBP14.58□□□□□ -0.08
LSM7-206ENST00000591515 HIST3H2BBQ8N257 126 aa14.58□□□□□ -0.08
LSM7-206ENST00000591515 LEPROTO15243 131 aa14.57□□□□□ -0.08
LSM7-206ENST00000591515 COX17Q14061 63 aa14.57□□□□□ -0.08
LSM7-206ENST00000591515 HERV-K104P63124 156 aa14.56□□□□□ -0.08
LSM7-206ENST00000591515 LINC00587B1AMM8 73 aa14.55□□□□□ -0.08
LSM7-206ENST00000591515 ERG28Q9UKR5 140 aa14.55□□□□□ -0.08
LSM7-206ENST00000591515 MYMXA0A1B0GTQ4 84 aa14.54□□□□□ -0.08
LSM7-206ENST00000591515 ZNF625Q96I27 306 aaPredicted RBP14.54□□□□□ -0.08
LSM7-206ENST00000591515 LGALS3P17931 250 aaKnown RBP14.53□□□□□ -0.08
LSM7-206ENST00000591515 HIST1H2BLQ99880 126 aa14.53□□□□□ -0.08
LSM7-206ENST00000591515 NDUFA12Q9UI09 145 aa14.53□□□□□ -0.08
LSM7-206ENST00000591515 NMUP48645 174 aa14.52□□□□□ -0.09
LSM7-206ENST00000591515 SNRPEP62304 92 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms