RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 C10orf25Q5T742 122 aa10.79□□□□□ -0.68
LSM14A-208ENST00000590416 COX7B2Q8TF08 81 aa10.79□□□□□ -0.68
LSM14A-208ENST00000590416 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.79□□□□□ -0.68
LSM14A-208ENST00000590416 SCXQ7RTU7 201 aa10.78□□□□□ -0.68
LSM14A-208ENST00000590416 KIAA1109Q2LD37 5005 aa10.78□□□□□ -0.68
LSM14A-208ENST00000590416 RYR1P21817 5038 aa10.78□□□□□ -0.68
LSM14A-208ENST00000590416 GAGE2BQ13066 116 aa10.77□□□□□ -0.69
LSM14A-208ENST00000590416 ODF1Q14990 250 aa10.77□□□□□ -0.69
LSM14A-208ENST00000590416 MAJINQ3KP22 176 aa10.77□□□□□ -0.69
LSM14A-208ENST00000590416 COA6Q5JTJ3 125 aaKnown RBP10.77□□□□□ -0.69
LSM14A-208ENST00000590416 C6orf48Q9UBA6 75 aa10.77□□□□□ -0.69
LSM14A-208ENST00000590416 A0A096LNI7 61 aa10.76□□□□□ -0.69
LSM14A-208ENST00000590416 CXCL5P42830 114 aa10.76□□□□□ -0.69
LSM14A-208ENST00000590416 RNF151Q2KHN1 245 aa10.76□□□□□ -0.69
LSM14A-208ENST00000590416 TRBV30A0A0K0K1B3 111 aa10.75□□□□□ -0.69
LSM14A-208ENST00000590416 PANO1I0J062 215 aa10.75□□□□□ -0.69
LSM14A-208ENST00000590416 SMR3BP02814 79 aaPredicted RBP10.75□□□□□ -0.69
LSM14A-208ENST00000590416 S100A6P06703 90 aa10.75□□□□□ -0.69
LSM14A-208ENST00000590416 CIRBP-AS1Q8TBR5 109 aa10.75□□□□□ -0.69
LSM14A-208ENST00000590416 PMCHL2Q9BQD1 86 aa10.75□□□□□ -0.69
LSM14A-208ENST00000590416 SPACA4Q8TDM5 124 aa10.74□□□□□ -0.69
LSM14A-208ENST00000590416 LINC00474Q9P2X8 69 aa10.74□□□□□ -0.69
LSM14A-208ENST00000590416 HSPG2P98160 4391 aa10.74□□□□□ -0.69
LSM14A-208ENST00000590416 PLNP26678 52 aa10.73□□□□□ -0.69
LSM14A-208ENST00000590416 PTTG1IPP53801 180 aa10.73□□□□□ -0.69
LSM14A-208ENST00000590416 IGLV5-39A0A0G2JS06 123 aa10.72□□□□□ -0.69
LSM14A-208ENST00000590416 TMEM223A0PJW6 202 aa10.72□□□□□ -0.69
LSM14A-208ENST00000590416 DPM2O94777 84 aa10.72□□□□□ -0.69
LSM14A-208ENST00000590416 C9orf116Q5BN46 136 aaPredicted RBP10.72□□□□□ -0.69
LSM14A-208ENST00000590416 A0A087WYN8 130 aa10.71□□□□□ -0.69
LSM14A-208ENST00000590416 SYS1-DBNDD2H3BUS1 97 aa10.71□□□□□ -0.69
LSM14A-208ENST00000590416 IGKCP01834 107 aa10.71□□□□□ -0.69
LSM14A-208ENST00000590416 S100A2P29034 98 aa10.71□□□□□ -0.69
LSM14A-208ENST00000590416 CIRBPQ14011 172 aaKnown RBP10.71□□□□□ -0.69
LSM14A-208ENST00000590416 GAGE2EQ4V326 116 aa10.71□□□□□ -0.69
LSM14A-208ENST00000590416 STPG4Q8N801 248 aa10.71□□□□□ -0.69
LSM14A-208ENST00000590416 GAGE2DQ9UEU5 116 aa10.71□□□□□ -0.69
LSM14A-208ENST00000590416 KRTDAPP60985 99 aa10.7□□□□□ -0.7
LSM14A-208ENST00000590416 TLX1NBP0CAT3 122 aa10.69□□□□□ -0.7
LSM14A-208ENST00000590416 HERVK_113P61574 105 aa10.69□□□□□ -0.7
LSM14A-208ENST00000590416 Q6ZRP5 223 aa10.69□□□□□ -0.7
LSM14A-208ENST00000590416 Q8N1X5 172 aa10.69□□□□□ -0.7
LSM14A-208ENST00000590416 C3orf79P0CE67 100 aa10.68□□□□□ -0.7
LSM14A-208ENST00000590416 PET117Q6UWS5 81 aa10.68□□□□□ -0.7
LSM14A-208ENST00000590416 LINC00528Q8N1L1 170 aa10.68□□□□□ -0.7
LSM14A-208ENST00000590416 HERC2O95714 4834 aa10.68□□□□□ -0.7
LSM14A-208ENST00000590416 NDUFC2-KCTD14E9PQ53 114 aa10.67□□□□□ -0.7
LSM14A-208ENST00000590416 FAM229AH3BQW9 127 aa10.67□□□□□ -0.7
LSM14A-208ENST00000590416 EPM2AB3EWF7 344 aa10.66□□□□□ -0.7
LSM14A-208ENST00000590416 Q5VSD8 79 aa10.66□□□□□ -0.7
LSM14A-208ENST00000590416 HIST3H2BBQ8N257 126 aa10.66□□□□□ -0.7
LSM14A-208ENST00000590416 ZNF625Q96I27 306 aaPredicted RBP10.66□□□□□ -0.7
LSM14A-208ENST00000590416 PLAC8Q9NZF1 115 aa10.66□□□□□ -0.7
LSM14A-208ENST00000590416 C20orf202A1L168 122 aa10.65□□□□□ -0.7
LSM14A-208ENST00000590416 LINC01545Q5VT33 79 aa10.65□□□□□ -0.7
LSM14A-208ENST00000590416 PFN2P35080 140 aa10.64□□□□□ -0.71
LSM14A-208ENST00000590416 SFTA2Q6UW10 78 aa10.64□□□□□ -0.71
LSM14A-208ENST00000590416 LEPROTO15243 131 aa10.63□□□□□ -0.71
LSM14A-208ENST00000590416 SNRPEP62304 92 aaKnown RBP10.63□□□□□ -0.71
LSM14A-208ENST00000590416 PLEKHB2Q96CS7 222 aa10.63□□□□□ -0.71
LSM14A-208ENST00000590416 FAM19A5Q7Z5A7 132 aaPredicted RBP10.62□□□□□ -0.71
LSM14A-208ENST00000590416 C7orf33Q8WU49 177 aa10.62□□□□□ -0.71
LSM14A-208ENST00000590416 KRTAP17-1Q9BYP8 105 aa10.62□□□□□ -0.71
LSM14A-208ENST00000590416 ERG28Q9UKR5 140 aa10.62□□□□□ -0.71
LSM14A-208ENST00000590416 A0A1W2PNN7 141 aa10.61□□□□□ -0.71
LSM14A-208ENST00000590416 PLA2G1BP04054 148 aaKnown RBP10.61□□□□□ -0.71
LSM14A-208ENST00000590416 LGALS3P17931 250 aaKnown RBP10.61□□□□□ -0.71
LSM14A-208ENST00000590416 HIST1H2BLQ99880 126 aa10.61□□□□□ -0.71
LSM14A-208ENST00000590416 XAGE1AQ9HD64 81 aa10.61□□□□□ -0.71
LSM14A-208ENST00000590416 NDUFA12Q9UI09 145 aa10.61□□□□□ -0.71
LSM14A-208ENST00000590416 FAM168BA1KXE4 195 aa10.6□□□□□ -0.71
LSM14A-208ENST00000590416 MEIG1Q5JSS6 88 aa10.6□□□□□ -0.71
LSM14A-208ENST00000590416 MYMXA0A1B0GTQ4 84 aa10.59□□□□□ -0.71
LSM14A-208ENST00000590416 J3QQQ9 107 aa10.59□□□□□ -0.71
LSM14A-208ENST00000590416 TSPEAR-AS2P59090 65 aa10.59□□□□□ -0.71
LSM14A-208ENST00000590416 RPL37AP61513 92 aaKnown RBP10.59□□□□□ -0.71
LSM14A-208ENST00000590416 C9orf129Q5T035 196 aaKnown RBP10.59□□□□□ -0.71
LSM14A-208ENST00000590416 A0A0U1RRA0 63 aa10.58□□□□□ -0.72
LSM14A-208ENST00000590416 LINC00158P58513 81 aa10.58□□□□□ -0.72
LSM14A-208ENST00000590416 HERV-K104P63124 156 aa10.58□□□□□ -0.72
LSM14A-208ENST00000590416 KRTAP4-5Q9BYR2 181 aa10.58□□□□□ -0.72
LSM14A-208ENST00000590416 COX17Q14061 63 aa10.57□□□□□ -0.72
LSM14A-208ENST00000590416 C5orf52A6NGY3 159 aa10.56□□□□□ -0.72
LSM14A-208ENST00000590416 E9PLD3 99 aa10.56□□□□□ -0.72
LSM14A-208ENST00000590416 PHF5AQ7RTV0 110 aaKnown RBP10.56□□□□□ -0.72
LSM14A-208ENST00000590416 ATOH7Q8N100 152 aa10.56□□□□□ -0.72
LSM14A-208ENST00000590416 M0QXV9 152 aa10.55□□□□□ -0.72
LSM14A-208ENST00000590416 NMUP48645 174 aa10.55□□□□□ -0.72
LSM14A-208ENST00000590416 AKR1D1P51857 326 aa10.55□□□□□ -0.72
LSM14A-208ENST00000590416 FAT1Q14517 4588 aa10.55□□□□□ -0.72
LSM14A-208ENST00000590416 VPS13BQ7Z7G8 4022 aa10.54□□□□□ -0.72
LSM14A-208ENST00000590416 SMIM13P0DJ93 91 aa10.54□□□□□ -0.72
LSM14A-208ENST00000590416 TMA7Q9Y2S6 64 aaKnown RBP10.54□□□□□ -0.72
LSM14A-208ENST00000590416 LINC00587B1AMM8 73 aa10.53□□□□□ -0.72
LSM14A-208ENST00000590416 SERTAD4-AS1Q5TG53 156 aa10.53□□□□□ -0.72
LSM14A-208ENST00000590416 UBE2BP63146 152 aa10.52□□□□□ -0.73
LSM14A-208ENST00000590416 SND1-IT1Q9HBX3 110 aa10.52□□□□□ -0.73
LSM14A-208ENST00000590416 SCGB1D1O95968 90 aa10.5□□□□□ -0.73
LSM14A-208ENST00000590416 MIR7-3HGQ8N6C7 128 aa10.5□□□□□ -0.73
LSM14A-208ENST00000590416 NKAPP1Q8N9T2 125 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms