RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 TSPAN13O95857 204 aa7.61□□□□□ -1.19
PRKCSH-210ENST00000589990 RPL18AQ02543 176 aaKnown RBP7.61□□□□□ -1.19
PRKCSH-210ENST00000589990 PMCHL1Q16048 86 aa7.61□□□□□ -1.19
PRKCSH-210ENST00000589990 ERASQ7Z444 233 aa7.61□□□□□ -1.19
PRKCSH-210ENST00000589990 A0A087WZ39 114 aa7.6□□□□□ -1.19
PRKCSH-210ENST00000589990 HBDP02042 147 aa7.6□□□□□ -1.19
PRKCSH-210ENST00000589990 PAPPA-AS1Q5QFB9 102 aa7.6□□□□□ -1.19
PRKCSH-210ENST00000589990 ZC2HC1BQ5TFG8 222 aa7.6□□□□□ -1.19
PRKCSH-210ENST00000589990 TEX43Q6ZNM6 134 aa7.6□□□□□ -1.19
PRKCSH-210ENST00000589990 CHCHD1Q96BP2 118 aaKnown RBP7.6□□□□□ -1.19
PRKCSH-210ENST00000589990 C2orf88Q9BSF0 95 aa7.6□□□□□ -1.19
PRKCSH-210ENST00000589990 HSBP1O75506 76 aa7.59□□□□□ -1.19
PRKCSH-210ENST00000589990 APOMO95445 188 aa7.59□□□□□ -1.19
PRKCSH-210ENST00000589990 CD164L2Q6UWJ8 174 aa7.59□□□□□ -1.19
PRKCSH-210ENST00000589990 TIMM17AQ99595 171 aa7.59□□□□□ -1.19
PRKCSH-210ENST00000589990 NPSP0C0P6 89 aa7.58□□□□□ -1.2
PRKCSH-210ENST00000589990 UBE2D1P51668 147 aa7.58□□□□□ -1.2
PRKCSH-210ENST00000589990 CAMK2N2Q96S95 79 aa7.58□□□□□ -1.2
PRKCSH-210ENST00000589990 AMELXQ99217 191 aa7.58□□□□□ -1.2
PRKCSH-210ENST00000589990 A0A096LNJ9 63 aa7.57□□□□□ -1.2
PRKCSH-210ENST00000589990 COX7A2LO14548 114 aa7.57□□□□□ -1.2
PRKCSH-210ENST00000589990 SERF1AO75920 110 aa7.57□□□□□ -1.2
PRKCSH-210ENST00000589990 NDUFA6P56556 154 aa7.57□□□□□ -1.2
PRKCSH-210ENST00000589990 C5orf38Q86SI9 138 aa7.57□□□□□ -1.2
PRKCSH-210ENST00000589990 KRTAP7-1Q8IUC3 87 aa7.57□□□□□ -1.2
PRKCSH-210ENST00000589990 FAM19A2Q8N3H0 131 aa7.57□□□□□ -1.2
PRKCSH-210ENST00000589990 CRCT1Q9UGL9 99 aa7.57□□□□□ -1.2
PRKCSH-210ENST00000589990 HIST1H2BKO60814 126 aa7.56□□□□□ -1.2
PRKCSH-210ENST00000589990 HIST1H2BJP06899 126 aa7.56□□□□□ -1.2
PRKCSH-210ENST00000589990 MALP21145 153 aa7.56□□□□□ -1.2
PRKCSH-210ENST00000589990 HIST1H2BOP23527 126 aa7.56□□□□□ -1.2
PRKCSH-210ENST00000589990 HIST1H2BBP33778 126 aa7.56□□□□□ -1.2
PRKCSH-210ENST00000589990 HIST1H2BDP58876 126 aa7.56□□□□□ -1.2
PRKCSH-210ENST00000589990 HIST1H2BCP62807 126 aa7.56□□□□□ -1.2
PRKCSH-210ENST00000589990 HIST2H2BEQ16778 126 aa7.56□□□□□ -1.2
PRKCSH-210ENST00000589990 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.56□□□□□ -1.2
PRKCSH-210ENST00000589990 LINC00173Q6ZV60 143 aa7.56□□□□□ -1.2
PRKCSH-210ENST00000589990 HIST1H2BHQ93079 126 aa7.56□□□□□ -1.2
PRKCSH-210ENST00000589990 HIST1H2BNQ99877 126 aa7.56□□□□□ -1.2
PRKCSH-210ENST00000589990 HIST1H2BMQ99879 126 aa7.56□□□□□ -1.2
PRKCSH-210ENST00000589990 ATP5LO75964 103 aa7.55□□□□□ -1.2
PRKCSH-210ENST00000589990 PMVKQ15126 192 aa7.55□□□□□ -1.2
PRKCSH-210ENST00000589990 PDZD11Q5EBL8 140 aa7.55□□□□□ -1.2
PRKCSH-210ENST00000589990 LINC00242Q5T6M2 205 aa7.55□□□□□ -1.2
PRKCSH-210ENST00000589990 NUPR1O60356 82 aa7.54□□□□□ -1.2
PRKCSH-210ENST00000589990 FAM19A5Q7Z5A7 132 aaPredicted RBP7.54□□□□□ -1.2
PRKCSH-210ENST00000589990 CST9LQ9H4G1 147 aa7.54□□□□□ -1.2
PRKCSH-210ENST00000589990 IGHV3OR16-9A0A0B4J2B5 98 aa7.53□□□□□ -1.2
PRKCSH-210ENST00000589990 RPL13AP40429 203 aaKnown RBP7.53□□□□□ -1.2
PRKCSH-210ENST00000589990 LINC00310P59036 64 aa7.53□□□□□ -1.2
PRKCSH-210ENST00000589990 SEC11AP67812 179 aa7.53□□□□□ -1.2
PRKCSH-210ENST00000589990 LCE2DQ5TA82 110 aaPredicted RBP7.53□□□□□ -1.2
PRKCSH-210ENST00000589990 RETNLBQ9BQ08 111 aa7.53□□□□□ -1.2
PRKCSH-210ENST00000589990 GEMIN7Q9H840 131 aaKnown RBP7.53□□□□□ -1.2
PRKCSH-210ENST00000589990 LEPROTL1O95214 131 aa7.52□□□□□ -1.21
PRKCSH-210ENST00000589990 FABP4P15090 132 aa7.52□□□□□ -1.21
PRKCSH-210ENST00000589990 C10orf25Q5T742 122 aa7.52□□□□□ -1.21
PRKCSH-210ENST00000589990 IFI27L1Q96BM0 104 aa7.52□□□□□ -1.21
PRKCSH-210ENST00000589990 C2orf48Q96LS8 159 aa7.52□□□□□ -1.21
PRKCSH-210ENST00000589990 HERVK_113P63121 156 aa7.51□□□□□ -1.21
PRKCSH-210ENST00000589990 A0A087X002 238 aa7.5□□□□□ -1.21
PRKCSH-210ENST00000589990 TINCRA0A1B0GVN0 87 aa7.5□□□□□ -1.21
PRKCSH-210ENST00000589990 SPAG11BQ08648 103 aa7.5□□□□□ -1.21
PRKCSH-210ENST00000589990 FAM19A3Q7Z5A8 133 aa7.5□□□□□ -1.21
PRKCSH-210ENST00000589990 ORAOV1Q8WV07 137 aa7.5□□□□□ -1.21
PRKCSH-210ENST00000589990 LINC00469Q8N7U9 141 aa7.49□□□□□ -1.21
PRKCSH-210ENST00000589990 CDKN2A-AS1Q9UH64 79 aa7.49□□□□□ -1.21
PRKCSH-210ENST00000589990 HSPB8Q9UJY1 196 aa7.49□□□□□ -1.21
PRKCSH-210ENST00000589990 H0Y8G0 127 aa7.48□□□□□ -1.21
PRKCSH-210ENST00000589990 GAGE2EQ4V326 116 aa7.48□□□□□ -1.21
PRKCSH-210ENST00000589990 PACRGQ96M98 296 aaPredicted RBP7.48□□□□□ -1.21
PRKCSH-210ENST00000589990 GAGE2DQ9UEU5 116 aa7.48□□□□□ -1.21
PRKCSH-210ENST00000589990 CHTOPQ9Y3Y2 248 aaKnown RBP7.48□□□□□ -1.21
PRKCSH-210ENST00000589990 M0QXV9 152 aa7.47□□□□□ -1.21
PRKCSH-210ENST00000589990 UBE2BP63146 152 aa7.47□□□□□ -1.21
PRKCSH-210ENST00000589990 RNF151Q2KHN1 245 aa7.47□□□□□ -1.21
PRKCSH-210ENST00000589990 LINC01561Q8N1V8 128 aa7.47□□□□□ -1.21
PRKCSH-210ENST00000589990 OR10D4PQ8NGN7 298 aa7.47□□□□□ -1.21
PRKCSH-210ENST00000589990 TRAV12-1A0A0B4J245 112 aa7.46□□□□□ -1.22
PRKCSH-210ENST00000589990 PRSS2P07478 247 aa7.46□□□□□ -1.22
PRKCSH-210ENST00000589990 IGLC3P0DOY3 106 aa7.46□□□□□ -1.22
PRKCSH-210ENST00000589990 COA6Q5JTJ3 125 aaKnown RBP7.46□□□□□ -1.22
PRKCSH-210ENST00000589990 UNQ6190/PRO20217Q6UXQ8 127 aa7.46□□□□□ -1.22
PRKCSH-210ENST00000589990 MAP1LC3CQ9BXW4 147 aa7.46□□□□□ -1.22
PRKCSH-210ENST00000589990 MRPL35Q9NZE8 188 aaKnown RBP7.46□□□□□ -1.22
PRKCSH-210ENST00000589990 TOMM7Q9P0U1 55 aa7.46□□□□□ -1.22
PRKCSH-210ENST00000589990 C6orf48Q9UBA6 75 aa7.46□□□□□ -1.22
PRKCSH-210ENST00000589990 H3BRM9 83 aa7.45□□□□□ -1.22
PRKCSH-210ENST00000589990 C6orf226Q5I0X4 101 aa7.45□□□□□ -1.22
PRKCSH-210ENST00000589990 CDIP1Q9H305 208 aa7.45□□□□□ -1.22
PRKCSH-210ENST00000589990 IGLV5-45A0A087WSX0 123 aa7.44□□□□□ -1.22
PRKCSH-210ENST00000589990 C11orf86A6NJI1 115 aa7.44□□□□□ -1.22
PRKCSH-210ENST00000589990 ZNF861PO60384 105 aa7.44□□□□□ -1.22
PRKCSH-210ENST00000589990 SPINK8P0C7L1 97 aa7.44□□□□□ -1.22
PRKCSH-210ENST00000589990 TMEM170BQ5T4T1 132 aa7.44□□□□□ -1.22
PRKCSH-210ENST00000589990 ANAPC11Q9NYG5 84 aa7.44□□□□□ -1.22
PRKCSH-210ENST00000589990 F8VRH5 84 aa7.43□□□□□ -1.22
PRKCSH-210ENST00000589990 NDUFA1O15239 70 aa7.43□□□□□ -1.22
PRKCSH-210ENST00000589990 S100A6P06703 90 aa7.43□□□□□ -1.22
PRKCSH-210ENST00000589990 TLX1NBP0CAT3 122 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms