RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 PHF5AQ7RTV0 110 aaKnown RBP11.05□□□□□ -0.64
H3F3B-209ENST00000589949 MRPS36P82909 103 aaKnown RBP11.04□□□□□ -0.64
H3F3B-209ENST00000589949 RNF151Q2KHN1 245 aa11.04□□□□□ -0.64
H3F3B-209ENST00000589949 KRTAP11-1Q8IUC1 163 aa11.04□□□□□ -0.64
H3F3B-209ENST00000589949 OR10D4PQ8NGN7 298 aa11.04□□□□□ -0.64
H3F3B-209ENST00000589949 ORAOV1Q8WV07 137 aa11.04□□□□□ -0.64
H3F3B-209ENST00000589949 PACRGQ96M98 296 aaPredicted RBP11.04□□□□□ -0.64
H3F3B-209ENST00000589949 SPANXA1Q9NS26 97 aa11.04□□□□□ -0.64
H3F3B-209ENST00000589949 K7EMI3 77 aa11.03□□□□□ -0.64
H3F3B-209ENST00000589949 RNF213Q63HN8 5207 aa11.03□□□□□ -0.64
H3F3B-209ENST00000589949 FAM168BA1KXE4 195 aa11.02□□□□□ -0.65
H3F3B-209ENST00000589949 IFITM10A6NMD0 228 aa11.02□□□□□ -0.65
H3F3B-209ENST00000589949 UNQ6190/PRO20217Q6UXQ8 127 aa11.02□□□□□ -0.65
H3F3B-209ENST00000589949 HIST1H2BLQ99880 126 aa11.02□□□□□ -0.65
H3F3B-209ENST00000589949 MRPL35Q9NZE8 188 aaKnown RBP11.02□□□□□ -0.65
H3F3B-209ENST00000589949 KRTAP7-1Q8IUC3 87 aa11.01□□□□□ -0.65
H3F3B-209ENST00000589949 C6orf48Q9UBA6 75 aa11.01□□□□□ -0.65
H3F3B-209ENST00000589949 FABP4P15090 132 aa11□□□□□ -0.65
H3F3B-209ENST00000589949 KIAA0087Q14695 138 aa11□□□□□ -0.65
H3F3B-209ENST00000589949 FAM19A2Q8N3H0 131 aa11□□□□□ -0.65
H3F3B-209ENST00000589949 ORMDL2Q53FV1 153 aa10.99□□□□□ -0.65
H3F3B-209ENST00000589949 IGLV4-3A0A075B6K6 122 aa10.98□□□□□ -0.65
H3F3B-209ENST00000589949 C1orf137Q5JT78 98 aa10.98□□□□□ -0.65
H3F3B-209ENST00000589949 LINC00242Q5T6M2 205 aa10.98□□□□□ -0.65
H3F3B-209ENST00000589949 NDUFA1O15239 70 aa10.97□□□□□ -0.65
H3F3B-209ENST00000589949 HBDP02042 147 aa10.97□□□□□ -0.65
H3F3B-209ENST00000589949 PMCHL1Q16048 86 aa10.97□□□□□ -0.65
H3F3B-209ENST00000589949 ZC2HC1BQ5TFG8 222 aa10.97□□□□□ -0.65
H3F3B-209ENST00000589949 A0A087WZ39 114 aa10.96□□□□□ -0.65
H3F3B-209ENST00000589949 A0A096LNJ9 63 aa10.96□□□□□ -0.65
H3F3B-209ENST00000589949 F8WDY8 70 aa10.96□□□□□ -0.65
H3F3B-209ENST00000589949 TLX1NBP0CAT3 122 aa10.96□□□□□ -0.65
H3F3B-209ENST00000589949 G0S2P27469 103 aa10.96□□□□□ -0.65
H3F3B-209ENST00000589949 PYGO1Q9Y3Y4 419 aa10.96□□□□□ -0.65
H3F3B-209ENST00000589949 LEPROTL1O95214 131 aa10.95□□□□□ -0.66
H3F3B-209ENST00000589949 AKR1D1P51857 326 aa10.95□□□□□ -0.66
H3F3B-209ENST00000589949 C2orf82Q6UX34 121 aa10.95□□□□□ -0.66
H3F3B-209ENST00000589949 GAGE2EQ4V326 116 aa10.94□□□□□ -0.66
H3F3B-209ENST00000589949 LINC00173Q6ZV60 143 aa10.94□□□□□ -0.66
H3F3B-209ENST00000589949 FAM19A5Q7Z5A7 132 aaPredicted RBP10.94□□□□□ -0.66
H3F3B-209ENST00000589949 GAGE2DQ9UEU5 116 aa10.94□□□□□ -0.66
H3F3B-209ENST00000589949 HSPB8Q9UJY1 196 aa10.94□□□□□ -0.66
H3F3B-209ENST00000589949 LINC01549A6NIU2 74 aa10.93□□□□□ -0.66
H3F3B-209ENST00000589949 IGLV7-43P04211 117 aa10.93□□□□□ -0.66
H3F3B-209ENST00000589949 UBE2D1P51668 147 aa10.93□□□□□ -0.66
H3F3B-209ENST00000589949 TMEM141Q96I45 108 aa10.92□□□□□ -0.66
H3F3B-209ENST00000589949 PRR26Q8N8Z3 221 aa10.91□□□□□ -0.66
H3F3B-209ENST00000589949 TOMM6Q96B49 74 aa10.91□□□□□ -0.66
H3F3B-209ENST00000589949 C9orf129Q5T035 196 aaKnown RBP10.9□□□□□ -0.66
H3F3B-209ENST00000589949 C2orf66Q6UXQ4 117 aa10.9□□□□□ -0.66
H3F3B-209ENST00000589949 TEX43Q6ZNM6 134 aa10.89□□□□□ -0.67
H3F3B-209ENST00000589949 AMELXQ99217 191 aa10.89□□□□□ -0.67
H3F3B-209ENST00000589949 MAP1LC3CQ9BXW4 147 aa10.89□□□□□ -0.67
H3F3B-209ENST00000589949 CYSLTR1Q9Y271 337 aa10.89□□□□□ -0.67
H3F3B-209ENST00000589949 ATP5LO75964 103 aa10.88□□□□□ -0.67
H3F3B-209ENST00000589949 C3orf79P0CE67 100 aa10.88□□□□□ -0.67
H3F3B-209ENST00000589949 KRTDAPP60985 99 aa10.88□□□□□ -0.67
H3F3B-209ENST00000589949 DIRC1Q969H9 104 aa10.88□□□□□ -0.67
H3F3B-209ENST00000589949 IFI27L1Q96BM0 104 aa10.88□□□□□ -0.67
H3F3B-209ENST00000589949 TRBV30A0A0K0K1B3 111 aa10.87□□□□□ -0.67
H3F3B-209ENST00000589949 IGIPA6NJ69 53 aa10.87□□□□□ -0.67
H3F3B-209ENST00000589949 H0Y9J4 135 aa10.87□□□□□ -0.67
H3F3B-209ENST00000589949 JOSD1Q15040 202 aaPredicted RBP10.87□□□□□ -0.67
H3F3B-209ENST00000589949 SCGB3A1Q96QR1 104 aa10.87□□□□□ -0.67
H3F3B-209ENST00000589949 NDUFC2-KCTD14E9PQ53 114 aa10.86□□□□□ -0.67
H3F3B-209ENST00000589949 M0QXV9 152 aa10.86□□□□□ -0.67
H3F3B-209ENST00000589949 KRTAP1-4P0C5Y4 121 aa10.86□□□□□ -0.67
H3F3B-209ENST00000589949 ERASQ7Z444 233 aa10.86□□□□□ -0.67
H3F3B-209ENST00000589949 LPAP08519 4548 aa10.86□□□□□ -0.67
H3F3B-209ENST00000589949 SYS1-DBNDD2H3BUS1 97 aa10.85□□□□□ -0.67
H3F3B-209ENST00000589949 PET117Q6UWS5 81 aa10.85□□□□□ -0.67
H3F3B-209ENST00000589949 LINC01561Q8N1V8 128 aa10.85□□□□□ -0.67
H3F3B-209ENST00000589949 PYY3Q5JQD4 70 aa10.84□□□□□ -0.67
H3F3B-209ENST00000589949 TIMM17AQ99595 171 aa10.84□□□□□ -0.67
H3F3B-209ENST00000589949 VCX2Q9H322 139 aa10.84□□□□□ -0.67
H3F3B-209ENST00000589949 SCGB1D1O95968 90 aa10.83□□□□□ -0.68
H3F3B-209ENST00000589949 SMIM6P0DI80 62 aa10.83□□□□□ -0.68
H3F3B-209ENST00000589949 FAM19A3Q7Z5A8 133 aa10.83□□□□□ -0.68
H3F3B-209ENST00000589949 C2orf88Q9BSF0 95 aa10.83□□□□□ -0.68
H3F3B-209ENST00000589949 NPSP0C0P6 89 aa10.82□□□□□ -0.68
H3F3B-209ENST00000589949 Q6ZN92 141 aa10.82□□□□□ -0.68
H3F3B-209ENST00000589949 LINC00469Q8N7U9 141 aa10.82□□□□□ -0.68
H3F3B-209ENST00000589949 TOMM7Q9P0U1 55 aa10.82□□□□□ -0.68
H3F3B-209ENST00000589949 CDKN2A-AS1Q9UH64 79 aa10.82□□□□□ -0.68
H3F3B-209ENST00000589949 C20orf202A1L168 122 aa10.81□□□□□ -0.68
H3F3B-209ENST00000589949 UBE2BP63146 152 aa10.81□□□□□ -0.68
H3F3B-209ENST00000589949 LINC01545Q5VT33 79 aa10.8□□□□□ -0.68
H3F3B-209ENST00000589949 XAGE1AQ9HD64 81 aa10.8□□□□□ -0.68
H3F3B-209ENST00000589949 TRAV12-1A0A0B4J245 112 aa10.79□□□□□ -0.68
H3F3B-209ENST00000589949 H0Y8G0 127 aa10.79□□□□□ -0.68
H3F3B-209ENST00000589949 PAPPA-AS1Q5QFB9 102 aa10.79□□□□□ -0.68
H3F3B-209ENST00000589949 Q8IZM0 81 aa10.79□□□□□ -0.68
H3F3B-209ENST00000589949 PRSS2P07478 247 aa10.78□□□□□ -0.68
H3F3B-209ENST00000589949 CKS1BP61024 79 aa10.78□□□□□ -0.68
H3F3B-209ENST00000589949 C6orf226Q5I0X4 101 aa10.78□□□□□ -0.68
H3F3B-209ENST00000589949 LINC00518Q8N0U6 118 aa10.78□□□□□ -0.68
H3F3B-209ENST00000589949 IGLV1-50A0A075B6I6 118 aa10.77□□□□□ -0.69
H3F3B-209ENST00000589949 PMVKQ15126 192 aa10.77□□□□□ -0.69
H3F3B-209ENST00000589949 C22orf24Q9Y442 160 aa10.77□□□□□ -0.69
H3F3B-209ENST00000589949 HERVK_113P63121 156 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms