RNA–Protein interactions for RNA: ENST00000589871.1

RBM42-205, Transcript of RNA binding motif protein 42, humanhuman

TSL 5 BASIC

Gene RBM42, Length 1,487 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-205ENST00000589871 PDZD11Q5EBL8 140 aa15.13■□□□□ 0.01
RBM42-205ENST00000589871 CHCHD1Q96BP2 118 aaKnown RBP15.13■□□□□ 0.01
RBM42-205ENST00000589871 NDUFA6P56556 154 aa15.12■□□□□ 0.01
RBM42-205ENST00000589871 DMBT1Q9UGM3 2413 aaPredicted RBP15.12■□□□□ 0.01
RBM42-205ENST00000589871 ATP5LO75964 103 aa15.11■□□□□ 0.01
RBM42-205ENST00000589871 TRGC2P03986 189 aa15.11■□□□□ 0.01
RBM42-205ENST00000589871 Q6ZRP5 223 aa15.1■□□□□ 0.01
RBM42-205ENST00000589871 SMIM1B2RUZ4 78 aa15.09■□□□□ 0.01
RBM42-205ENST00000589871 A0A1W2PNN7 141 aa15.08■□□□□ 0.01
RBM42-205ENST00000589871 C9orf116Q5BN46 136 aaPredicted RBP15.08■□□□□ 0.01
RBM42-205ENST00000589871 IGLC3P0DOY3 106 aa15.07■□□□□ 0
RBM42-205ENST00000589871 GAGE2EQ4V326 116 aa15.07■□□□□ 0
RBM42-205ENST00000589871 BAGE3Q86Y29 109 aa15.07■□□□□ 0
RBM42-205ENST00000589871 GAGE2DQ9UEU5 116 aa15.07■□□□□ 0
RBM42-205ENST00000589871 COLCA2A8K830 154 aa15.06■□□□□ 0
RBM42-205ENST00000589871 NDUFC2-KCTD14E9PQ53 114 aa15.06■□□□□ 0
RBM42-205ENST00000589871 H3BRM9 83 aa15.06■□□□□ 0
RBM42-205ENST00000589871 CXCL5P42830 114 aa15.06■□□□□ 0
RBM42-205ENST00000589871 SPINK8P0C7L1 97 aa15.05■□□□□ -0
RBM42-205ENST00000589871 HNRNPA3P51991 378 aaKnown RBP15.05■□□□□ -0
RBM42-205ENST00000589871 PKHD1L1Q86WI1 4243 aa15.04■□□□□ -0
RBM42-205ENST00000589871 F8VRH5 84 aa15.04■□□□□ -0
RBM42-205ENST00000589871 HSBP1O75506 76 aa15.04■□□□□ -0
RBM42-205ENST00000589871 COX7B2Q8TF08 81 aa15.04■□□□□ -0
RBM42-205ENST00000589871 PRR3P79522 188 aaKnown RBP15.01□□□□□ -0.01
RBM42-205ENST00000589871 IFI27L1Q96BM0 104 aa15.01□□□□□ -0.01
RBM42-205ENST00000589871 KRTAP29-1A8MX34 341 aaPredicted RBP15□□□□□ -0.01
RBM42-205ENST00000589871 ZNF22P17026 224 aaPredicted RBP15□□□□□ -0.01
RBM42-205ENST00000589871 FAM19A2Q8N3H0 131 aa15□□□□□ -0.01
RBM42-205ENST00000589871 FAM168BA1KXE4 195 aa14.99□□□□□ -0.01
RBM42-205ENST00000589871 J3QL48 77 aa14.99□□□□□ -0.01
RBM42-205ENST00000589871 CHTOPQ9Y3Y2 248 aaKnown RBP14.98□□□□□ -0.01
RBM42-205ENST00000589871 C11orf86A6NJI1 115 aa14.97□□□□□ -0.01
RBM42-205ENST00000589871 TRAV12-1A0A0B4J245 112 aa14.96□□□□□ -0.01
RBM42-205ENST00000589871 SERF1AO75920 110 aa14.96□□□□□ -0.01
RBM42-205ENST00000589871 PHF5AQ7RTV0 110 aaKnown RBP14.96□□□□□ -0.01
RBM42-205ENST00000589871 FAM19A5Q7Z5A7 132 aaPredicted RBP14.96□□□□□ -0.01
RBM42-205ENST00000589871 LRP1Q07954 4544 aaKnown RBP14.96□□□□□ -0.01
RBM42-205ENST00000589871 IGLV5-39A0A0G2JS06 123 aa14.95□□□□□ -0.02
RBM42-205ENST00000589871 SCO1O75880 301 aa14.95□□□□□ -0.02
RBM42-205ENST00000589871 OXTP01178 125 aa14.95□□□□□ -0.02
RBM42-205ENST00000589871 C9orf129Q5T035 196 aaKnown RBP14.95□□□□□ -0.02
RBM42-205ENST00000589871 TMEM170BQ5T4T1 132 aa14.95□□□□□ -0.02
RBM42-205ENST00000589871 LINC00310P59036 64 aa14.94□□□□□ -0.02
RBM42-205ENST00000589871 HERC1Q15751 4861 aa14.92□□□□□ -0.02
RBM42-205ENST00000589871 LEPROTL1O95214 131 aa14.91□□□□□ -0.02
RBM42-205ENST00000589871 KRTAP7-1Q8IUC3 87 aa14.91□□□□□ -0.02
RBM42-205ENST00000589871 XAGE1AQ9HD64 81 aa14.91□□□□□ -0.02
RBM42-205ENST00000589871 FAT3Q8TDW7 4589 aa14.91□□□□□ -0.02
RBM42-205ENST00000589871 M0QXV9 152 aa14.9□□□□□ -0.02
RBM42-205ENST00000589871 PSORS1C2Q9UIG4 136 aa14.9□□□□□ -0.02
RBM42-205ENST00000589871 NUPR1O60356 82 aa14.88□□□□□ -0.03
RBM42-205ENST00000589871 H0Y8G0 127 aa14.86□□□□□ -0.03
RBM42-205ENST00000589871 HSPB8Q9UJY1 196 aa14.86□□□□□ -0.03
RBM42-205ENST00000589871 SERTAD4-AS1Q5TG53 156 aa14.85□□□□□ -0.03
RBM42-205ENST00000589871 SPINK6Q6UWN8 80 aa14.85□□□□□ -0.03
RBM42-205ENST00000589871 TMEM223A0PJW6 202 aa14.84□□□□□ -0.03
RBM42-205ENST00000589871 UBE2BP63146 152 aa14.84□□□□□ -0.03
RBM42-205ENST00000589871 C1orf137Q5JT78 98 aa14.84□□□□□ -0.03
RBM42-205ENST00000589871 SFTA2Q6UW10 78 aa14.84□□□□□ -0.03
RBM42-205ENST00000589871 HIST1H2BKO60814 126 aa14.83□□□□□ -0.03
RBM42-205ENST00000589871 HIST1H2BJP06899 126 aa14.83□□□□□ -0.03
RBM42-205ENST00000589871 FABP4P15090 132 aa14.83□□□□□ -0.03
RBM42-205ENST00000589871 HIST1H2BOP23527 126 aa14.83□□□□□ -0.03
RBM42-205ENST00000589871 HIST1H2BBP33778 126 aa14.83□□□□□ -0.03
RBM42-205ENST00000589871 HIST1H2BDP58876 126 aa14.83□□□□□ -0.03
RBM42-205ENST00000589871 HIST1H2BCP62807 126 aa14.83□□□□□ -0.03
RBM42-205ENST00000589871 ODF1Q14990 250 aa14.83□□□□□ -0.03
RBM42-205ENST00000589871 HIST2H2BEQ16778 126 aa14.83□□□□□ -0.03
RBM42-205ENST00000589871 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.83□□□□□ -0.03
RBM42-205ENST00000589871 HIST1H2BHQ93079 126 aa14.83□□□□□ -0.03
RBM42-205ENST00000589871 HIST1H2BNQ99877 126 aa14.83□□□□□ -0.03
RBM42-205ENST00000589871 HIST1H2BMQ99879 126 aa14.83□□□□□ -0.03
RBM42-205ENST00000589871 SRSF9Q13242 221 aaKnown RBP eCLIP14.82□□□□□ -0.04
RBM42-205ENST00000589871 PFN2P35080 140 aa14.82□□□□□ -0.04
RBM42-205ENST00000589871 KRTAP11-1Q8IUC1 163 aa14.82□□□□□ -0.04
RBM42-205ENST00000589871 C22orf24Q9Y442 160 aa14.82□□□□□ -0.04
RBM42-205ENST00000589871 ERG28Q9UKR5 140 aa14.81□□□□□ -0.04
RBM42-205ENST00000589871 COX17Q14061 63 aa14.8□□□□□ -0.04
RBM42-205ENST00000589871 ZNF625Q96I27 306 aaPredicted RBP14.79□□□□□ -0.04
RBM42-205ENST00000589871 LBHQ53QV2 105 aaPredicted RBP14.78□□□□□ -0.04
RBM42-205ENST00000589871 TP73-AS1Q9UF72 201 aa14.78□□□□□ -0.04
RBM42-205ENST00000589871 PLA2G2DQ9UNK4 145 aa14.77□□□□□ -0.04
RBM42-205ENST00000589871 PLNP26678 52 aa14.76□□□□□ -0.05
RBM42-205ENST00000589871 REG3GQ6UW15 175 aa14.76□□□□□ -0.05
RBM42-205ENST00000589871 MRPL55Q7Z7F7 128 aaKnown RBP14.76□□□□□ -0.05
RBM42-205ENST00000589871 IGLV7-43P04211 117 aa14.76□□□□□ -0.05
RBM42-205ENST00000589871 MAP1LC3CQ9BXW4 147 aa14.76□□□□□ -0.05
RBM42-205ENST00000589871 DPM2O94777 84 aa14.73□□□□□ -0.05
RBM42-205ENST00000589871 SND1-IT1Q9HBX3 110 aa14.73□□□□□ -0.05
RBM42-205ENST00000589871 MT1HL1P0DM35 61 aa14.71□□□□□ -0.05
RBM42-205ENST00000589871 NKAPP1Q8N9T2 125 aa14.71□□□□□ -0.05
RBM42-205ENST00000589871 LINC01600Q96MT4 127 aa14.71□□□□□ -0.05
RBM42-205ENST00000589871 PMCHL2Q9BQD1 86 aa14.71□□□□□ -0.05
RBM42-205ENST00000589871 IGLV5-37A0A075B6J1 123 aa14.7□□□□□ -0.06
RBM42-205ENST00000589871 IGKCP01834 107 aa14.69□□□□□ -0.06
RBM42-205ENST00000589871 LINC00158P58513 81 aa14.69□□□□□ -0.06
RBM42-205ENST00000589871 DIRC1Q969H9 104 aa14.69□□□□□ -0.06
RBM42-205ENST00000589871 LINC00167Q96N53 147 aa14.69□□□□□ -0.06
RBM42-205ENST00000589871 HERV-K104P63124 156 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms