RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 IL17DQ8TAD2 202 aa6.91□□□□□ -1.3
LINC01539-201ENST00000587904 LITAFQ99732 161 aa6.91□□□□□ -1.3
LINC01539-201ENST00000587904 UBE2D4Q9Y2X8 147 aa6.91□□□□□ -1.3
LINC01539-201ENST00000587904 C9orf66Q5T8R8 295 aa6.9□□□□□ -1.3
LINC01539-201ENST00000587904 MIAQ16674 131 aa6.89□□□□□ -1.31
LINC01539-201ENST00000587904 H7BZZ5 65 aa6.89□□□□□ -1.31
LINC01539-201ENST00000587904 BAALC-AS2P0C853 105 aa6.89□□□□□ -1.31
LINC01539-201ENST00000587904 ATP5EP2Q5VTU8 51 aa6.88□□□□□ -1.31
LINC01539-201ENST00000587904 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.88□□□□□ -1.31
LINC01539-201ENST00000587904 TIMM17BO60830 172 aa6.88□□□□□ -1.31
LINC01539-201ENST00000587904 DNAL4O96015 105 aa6.88□□□□□ -1.31
LINC01539-201ENST00000587904 GHRHP01286 108 aa6.88□□□□□ -1.31
LINC01539-201ENST00000587904 C16orf74Q96GX8 76 aa6.88□□□□□ -1.31
LINC01539-201ENST00000587904 PRR15Q8IV56 129 aa6.87□□□□□ -1.31
LINC01539-201ENST00000587904 IGKV3D-7A0A0C4DH55 119 aa6.86□□□□□ -1.31
LINC01539-201ENST00000587904 IGHV3-53P01767 116 aa6.86□□□□□ -1.31
LINC01539-201ENST00000587904 GIG44P09565 113 aaPredicted RBP6.86□□□□□ -1.31
LINC01539-201ENST00000587904 S100A7L2Q5SY68 101 aa6.86□□□□□ -1.31
LINC01539-201ENST00000587904 C22orf24Q9Y442 160 aa6.86□□□□□ -1.31
LINC01539-201ENST00000587904 IGHV3OR16-12A0A075B7B8 117 aa6.86□□□□□ -1.31
LINC01539-201ENST00000587904 KLKP1Q107X0 134 aa6.86□□□□□ -1.31
LINC01539-201ENST00000587904 Q6ZRU5 148 aa6.86□□□□□ -1.31
LINC01539-201ENST00000587904 C20orf197Q8N268 126 aa6.86□□□□□ -1.31
LINC01539-201ENST00000587904 WFDC10AQ9H1F0 79 aa6.86□□□□□ -1.31
LINC01539-201ENST00000587904 A0A087WVE0 104 aa6.85□□□□□ -1.31
LINC01539-201ENST00000587904 NDUFC1O43677 76 aa6.85□□□□□ -1.31
LINC01539-201ENST00000587904 PRM2P04554 102 aa6.85□□□□□ -1.31
LINC01539-201ENST00000587904 LYPD5Q6UWN5 251 aa6.85□□□□□ -1.31
LINC01539-201ENST00000587904 CSNK1G2-AS1Q8NCQ2 148 aa6.85□□□□□ -1.31
LINC01539-201ENST00000587904 CCKP06307 115 aa6.85□□□□□ -1.31
LINC01539-201ENST00000587904 RETNQ9HD89 108 aa6.85□□□□□ -1.31
LINC01539-201ENST00000587904 JMJD1CQ15652 2540 aa6.84□□□□□ -1.31
LINC01539-201ENST00000587904 TRAV7A0A075B6U4 112 aa6.84□□□□□ -1.31
LINC01539-201ENST00000587904 TRGV1A0A0A0MS02 117 aa6.84□□□□□ -1.31
LINC01539-201ENST00000587904 TRBV7-6A0A0J9YX20 115 aa6.84□□□□□ -1.31
LINC01539-201ENST00000587904 TRBV10-3A0A0K0K1G6 114 aa6.84□□□□□ -1.31
LINC01539-201ENST00000587904 DNHD1Q96M86 4753 aa6.84□□□□□ -1.31
LINC01539-201ENST00000587904 IGHV3-73A0A0B4J1V6 119 aa6.83□□□□□ -1.32
LINC01539-201ENST00000587904 C20orf203Q8NBC4 194 aa6.83□□□□□ -1.32
LINC01539-201ENST00000587904 OBSCN-AS1Q96MR7 158 aa6.83□□□□□ -1.32
LINC01539-201ENST00000587904 OVOL2Q9BRP0 275 aa6.83□□□□□ -1.32
LINC01539-201ENST00000587904 TRBV10-1A0A0K0K1A3 114 aa6.83□□□□□ -1.32
LINC01539-201ENST00000587904 PLAC8L1A1L4L8 177 aa6.83□□□□□ -1.32
LINC01539-201ENST00000587904 WFDC9Q8NEX5 89 aa6.83□□□□□ -1.32
LINC01539-201ENST00000587904 NACAE9PAV3 2078 aa6.83□□□□□ -1.32
LINC01539-201ENST00000587904 TENM1Q9UKZ4 2725 aa6.82□□□□□ -1.32
LINC01539-201ENST00000587904 IGHV3-30-3P0DP02 117 aa6.82□□□□□ -1.32
LINC01539-201ENST00000587904 ADAMTSL4-AS1Q5T5F5 129 aa6.82□□□□□ -1.32
LINC01539-201ENST00000587904 LINC00846Q9NV44 126 aa6.82□□□□□ -1.32
LINC01539-201ENST00000587904 RPL39P62891 51 aaKnown RBP6.81□□□□□ -1.32
LINC01539-201ENST00000587904 Q6ZTI0 123 aa6.81□□□□□ -1.32
LINC01539-201ENST00000587904 RBM3P98179 157 aaKnown RBP6.81□□□□□ -1.32
LINC01539-201ENST00000587904 Q6ZSN1 163 aa6.81□□□□□ -1.32
LINC01539-201ENST00000587904 NOP10Q9NPE3 64 aaKnown RBP6.81□□□□□ -1.32
LINC01539-201ENST00000587904 VWFP04275 2813 aa6.8□□□□□ -1.32
LINC01539-201ENST00000587904 A8MZ25 164 aa6.8□□□□□ -1.32
LINC01539-201ENST00000587904 K7EQD1 137 aa6.8□□□□□ -1.32
LINC01539-201ENST00000587904 LINC00474Q9P2X8 69 aa6.8□□□□□ -1.32
LINC01539-201ENST00000587904 ATRQ13535 2644 aa6.8□□□□□ -1.32
LINC01539-201ENST00000587904 RPL28P46779 137 aaKnown RBP6.8□□□□□ -1.32
LINC01539-201ENST00000587904 APOC4P55056 127 aa6.8□□□□□ -1.32
LINC01539-201ENST00000587904 RPL36AP83881 106 aaKnown RBP6.8□□□□□ -1.32
LINC01539-201ENST00000587904 RPL36ALQ969Q0 106 aaKnown RBP6.8□□□□□ -1.32
LINC01539-201ENST00000587904 NDUFA12Q9UI09 145 aa6.8□□□□□ -1.32
LINC01539-201ENST00000587904 IGHV1-58A0A0C4DH39 117 aa6.79□□□□□ -1.32
LINC01539-201ENST00000587904 IBA57-AS1B1ANH7 110 aa6.79□□□□□ -1.32
LINC01539-201ENST00000587904 CIRBPQ14011 172 aaKnown RBP6.79□□□□□ -1.32
LINC01539-201ENST00000587904 TRGV2A0A075B6R0 118 aa6.78□□□□□ -1.32
LINC01539-201ENST00000587904 TRAV13-2A0A0B4J235 113 aa6.78□□□□□ -1.32
LINC01539-201ENST00000587904 SPATA3Q8NHX4 192 aa6.78□□□□□ -1.32
LINC01539-201ENST00000587904 TRBV6-4A0A1B0GX49 114 aa6.78□□□□□ -1.32
LINC01539-201ENST00000587904 SS18Q15532 418 aa6.78□□□□□ -1.32
LINC01539-201ENST00000587904 IGLV4-3A0A075B6K6 122 aa6.77□□□□□ -1.33
LINC01539-201ENST00000587904 IGHV3-64A0A075B6Q5 118 aa6.77□□□□□ -1.33
LINC01539-201ENST00000587904 LINC00612Q8N6U2 182 aa6.77□□□□□ -1.33
LINC01539-201ENST00000587904 CHCHD7Q9BUK0 85 aa6.77□□□□□ -1.33
LINC01539-201ENST00000587904 TRAV23DV6A0A075B6W5 121 aa6.77□□□□□ -1.33
LINC01539-201ENST00000587904 KRTAP24-1Q3LI83 254 aa6.77□□□□□ -1.33
LINC01539-201ENST00000587904 DEFB104AQ8WTQ1 72 aa6.77□□□□□ -1.33
LINC01539-201ENST00000587904 F8WEM9 126 aa6.76□□□□□ -1.33
LINC01539-201ENST00000587904 Q9UF83 564 aa6.76□□□□□ -1.33
LINC01539-201ENST00000587904 X6R8D5 127 aa6.76□□□□□ -1.33
LINC01539-201ENST00000587904 FBN3Q75N90 2809 aa6.76□□□□□ -1.33
LINC01539-201ENST00000587904 A0A0J9YXV3 536 aa6.75□□□□□ -1.33
LINC01539-201ENST00000587904 TRGV4A0A0C4DH28 118 aa6.75□□□□□ -1.33
LINC01539-201ENST00000587904 LYRM9A8MSI8 78 aa6.75□□□□□ -1.33
LINC01539-201ENST00000587904 PAX4O43316 350 aa6.75□□□□□ -1.33
LINC01539-201ENST00000587904 MRPL55Q7Z7F7 128 aaKnown RBP6.75□□□□□ -1.33
LINC01539-201ENST00000587904 C14orf132Q9NPU4 83 aa6.75□□□□□ -1.33
LINC01539-201ENST00000587904 LINC00308Q8TCZ7 52 aa6.74□□□□□ -1.33
LINC01539-201ENST00000587904 IGHV3-38A0A0C4DH36 116 aa6.73□□□□□ -1.33
LINC01539-201ENST00000587904 NDUFA1O15239 70 aa6.73□□□□□ -1.33
LINC01539-201ENST00000587904 FAM218AQ96MZ4 157 aa6.73□□□□□ -1.33
LINC01539-201ENST00000587904 OPRPNQ99935 248 aaPredicted RBP6.73□□□□□ -1.33
LINC01539-201ENST00000587904 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.72□□□□□ -1.33
LINC01539-201ENST00000587904 IGKV2-29A2NJV5 120 aaPredicted RBP6.72□□□□□ -1.33
LINC01539-201ENST00000587904 MIFP14174 115 aa6.72□□□□□ -1.33
LINC01539-201ENST00000587904 NOTCH3Q9UM47 2321 aa6.72□□□□□ -1.33
LINC01539-201ENST00000587904 DEFB135Q30KP9 77 aa6.72□□□□□ -1.33
LINC01539-201ENST00000587904 DGAT2L7PQ6IED9 249 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms