RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 C2orf48Q96LS8 159 aa10.01□□□□□ -0.81
NCLN-203ENST00000587740 PACRGQ96M98 296 aaPredicted RBP10.01□□□□□ -0.81
NCLN-203ENST00000587740 CAMK2N2Q96S95 79 aa10.01□□□□□ -0.81
NCLN-203ENST00000587740 CDKN2A-AS1Q9UH64 79 aa10.01□□□□□ -0.81
NCLN-203ENST00000587740 NUPR1O60356 82 aa10□□□□□ -0.81
NCLN-203ENST00000587740 LEPROTL1O95214 131 aa10□□□□□ -0.81
NCLN-203ENST00000587740 LINC00469Q8N7U9 141 aa10□□□□□ -0.81
NCLN-203ENST00000587740 CARD19Q96LW7 228 aa10□□□□□ -0.81
NCLN-203ENST00000587740 F8WDY8 70 aa9.98□□□□□ -0.81
NCLN-203ENST00000587740 IGLC3P0DOY3 106 aa9.98□□□□□ -0.81
NCLN-203ENST00000587740 SDIM1Q6ZPB5 146 aa9.98□□□□□ -0.81
NCLN-203ENST00000587740 IGLV5-45A0A087WSX0 123 aa9.97□□□□□ -0.81
NCLN-203ENST00000587740 TRAV12-1A0A0B4J245 112 aa9.97□□□□□ -0.81
NCLN-203ENST00000587740 PRSS2P07478 247 aa9.97□□□□□ -0.81
NCLN-203ENST00000587740 Q6ZRU5 148 aa9.97□□□□□ -0.81
NCLN-203ENST00000587740 HSPB8Q9UJY1 196 aa9.97□□□□□ -0.81
NCLN-203ENST00000587740 PKIGQ9Y2B9 76 aa9.97□□□□□ -0.81
NCLN-203ENST00000587740 H3BRM9 83 aa9.96□□□□□ -0.82
NCLN-203ENST00000587740 NDUFA1O15239 70 aa9.96□□□□□ -0.82
NCLN-203ENST00000587740 FABP4P15090 132 aa9.96□□□□□ -0.82
NCLN-203ENST00000587740 KIAA0087Q14695 138 aa9.96□□□□□ -0.82
NCLN-203ENST00000587740 TOMM7Q9P0U1 55 aa9.96□□□□□ -0.82
NCLN-203ENST00000587740 CHTOPQ9Y3Y2 248 aaKnown RBP9.96□□□□□ -0.82
NCLN-203ENST00000587740 SMIM1B2RUZ4 78 aa9.94□□□□□ -0.82
NCLN-203ENST00000587740 PANO1I0J062 215 aa9.94□□□□□ -0.82
NCLN-203ENST00000587740 RNF151Q2KHN1 245 aa9.94□□□□□ -0.82
NCLN-203ENST00000587740 C6orf226Q5I0X4 101 aa9.94□□□□□ -0.82
NCLN-203ENST00000587740 Q8IZM0 81 aa9.94□□□□□ -0.82
NCLN-203ENST00000587740 MRPL35Q9NZE8 188 aaKnown RBP9.94□□□□□ -0.82
NCLN-203ENST00000587740 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.94□□□□□ -0.82
NCLN-203ENST00000587740 H0Y8G0 127 aa9.93□□□□□ -0.82
NCLN-203ENST00000587740 SPINK8P0C7L1 97 aa9.93□□□□□ -0.82
NCLN-203ENST00000587740 ZNF22P17026 224 aaPredicted RBP9.93□□□□□ -0.82
NCLN-203ENST00000587740 CKS1BP61024 79 aa9.93□□□□□ -0.82
NCLN-203ENST00000587740 UNQ6190/PRO20217Q6UXQ8 127 aa9.93□□□□□ -0.82
NCLN-203ENST00000587740 DPH3Q96FX2 82 aa9.93□□□□□ -0.82
NCLN-203ENST00000587740 LOC107984640A0A0U1RRK4 108 aa9.92□□□□□ -0.82
NCLN-203ENST00000587740 C11orf86A6NJI1 115 aa9.92□□□□□ -0.82
NCLN-203ENST00000587740 TMEM170BQ5T4T1 132 aa9.92□□□□□ -0.82
NCLN-203ENST00000587740 IGKV2-24A0A0C4DH68 120 aa9.91□□□□□ -0.82
NCLN-203ENST00000587740 F8VRH5 84 aa9.91□□□□□ -0.82
NCLN-203ENST00000587740 COA6Q5JTJ3 125 aaKnown RBP9.91□□□□□ -0.82
NCLN-203ENST00000587740 C10orf25Q5T742 122 aa9.91□□□□□ -0.82
NCLN-203ENST00000587740 C2orf82Q6UX34 121 aa9.91□□□□□ -0.82
NCLN-203ENST00000587740 COX7B2Q8TF08 81 aa9.91□□□□□ -0.82
NCLN-203ENST00000587740 TRBV30A0A0K0K1B3 111 aa9.9□□□□□ -0.82
NCLN-203ENST00000587740 CHTF8P0CG12 524 aa9.9□□□□□ -0.82
NCLN-203ENST00000587740 MAP1LC3CQ9BXW4 147 aa9.9□□□□□ -0.82
NCLN-203ENST00000587740 LINC00474Q9P2X8 69 aa9.9□□□□□ -0.82
NCLN-203ENST00000587740 C6orf48Q9UBA6 75 aa9.9□□□□□ -0.82
NCLN-203ENST00000587740 A0A096LNI7 61 aa9.89□□□□□ -0.83
NCLN-203ENST00000587740 CXCL5P42830 114 aa9.89□□□□□ -0.83
NCLN-203ENST00000587740 GAGE2BQ13066 116 aa9.89□□□□□ -0.83
NCLN-203ENST00000587740 CIRBPQ14011 172 aaKnown RBP9.89□□□□□ -0.83
NCLN-203ENST00000587740 ODF1Q14990 250 aa9.89□□□□□ -0.83
NCLN-203ENST00000587740 MAJINQ3KP22 176 aa9.89□□□□□ -0.83
NCLN-203ENST00000587740 SPACA4Q8TDM5 124 aa9.89□□□□□ -0.83
NCLN-203ENST00000587740 RPL18AQ02543 176 aaKnown RBP9.88□□□□□ -0.83
NCLN-203ENST00000587740 PTTG1IPP53801 180 aa9.87□□□□□ -0.83
NCLN-203ENST00000587740 IGLV5-39A0A0G2JS06 123 aa9.86□□□□□ -0.83
NCLN-203ENST00000587740 TLX1NBP0CAT3 122 aa9.86□□□□□ -0.83
NCLN-203ENST00000587740 A0A087WYN8 130 aa9.85□□□□□ -0.83
NCLN-203ENST00000587740 TMEM223A0PJW6 202 aa9.85□□□□□ -0.83
NCLN-203ENST00000587740 PLNP26678 52 aa9.85□□□□□ -0.83
NCLN-203ENST00000587740 SYS1-DBNDD2H3BUS1 97 aa9.84□□□□□ -0.83
NCLN-203ENST00000587740 DPM2O94777 84 aa9.84□□□□□ -0.83
NCLN-203ENST00000587740 C9orf116Q5BN46 136 aaPredicted RBP9.84□□□□□ -0.83
NCLN-203ENST00000587740 STPG4Q8N801 248 aa9.84□□□□□ -0.83
NCLN-203ENST00000587740 NDUFC2-KCTD14E9PQ53 114 aa9.83□□□□□ -0.84
NCLN-203ENST00000587740 IGKCP01834 107 aa9.83□□□□□ -0.84
NCLN-203ENST00000587740 Q6ZRP5 223 aa9.83□□□□□ -0.84
NCLN-203ENST00000587740 PMCHL2Q9BQD1 86 aa9.83□□□□□ -0.84
NCLN-203ENST00000587740 PLAC8Q9NZF1 115 aa9.83□□□□□ -0.84
NCLN-203ENST00000587740 S100A6P06703 90 aa9.82□□□□□ -0.84
NCLN-203ENST00000587740 GAGE2EQ4V326 116 aa9.82□□□□□ -0.84
NCLN-203ENST00000587740 GAGE2DQ9UEU5 116 aa9.82□□□□□ -0.84
NCLN-203ENST00000587740 PET117Q6UWS5 81 aa9.81□□□□□ -0.84
NCLN-203ENST00000587740 C3orf79P0CE67 100 aa9.8□□□□□ -0.84
NCLN-203ENST00000587740 SFTA2Q6UW10 78 aa9.8□□□□□ -0.84
NCLN-203ENST00000587740 KRTDAPP60985 99 aa9.79□□□□□ -0.84
NCLN-203ENST00000587740 HERVK_113P61574 105 aa9.79□□□□□ -0.84
NCLN-203ENST00000587740 S100A2P29034 98 aa9.78□□□□□ -0.84
NCLN-203ENST00000587740 LINC01600Q96MT4 127 aa9.78□□□□□ -0.84
NCLN-203ENST00000587740 A0A1W2PNN7 141 aa9.77□□□□□ -0.85
NCLN-203ENST00000587740 LINC01545Q5VT33 79 aa9.77□□□□□ -0.85
NCLN-203ENST00000587740 HIST3H2BBQ8N257 126 aa9.77□□□□□ -0.85
NCLN-203ENST00000587740 LEPROTO15243 131 aa9.76□□□□□ -0.85
NCLN-203ENST00000587740 C7orf33Q8WU49 177 aa9.76□□□□□ -0.85
NCLN-203ENST00000587740 PLEKHB2Q96CS7 222 aa9.76□□□□□ -0.85
NCLN-203ENST00000587740 ZNF625Q96I27 306 aaPredicted RBP9.76□□□□□ -0.85
NCLN-203ENST00000587740 C20orf202A1L168 122 aa9.75□□□□□ -0.85
NCLN-203ENST00000587740 ERG28Q9UKR5 140 aa9.75□□□□□ -0.85
NCLN-203ENST00000587740 PFN2P35080 140 aa9.74□□□□□ -0.85
NCLN-203ENST00000587740 SNRPEP62304 92 aaKnown RBP9.74□□□□□ -0.85
NCLN-203ENST00000587740 COX17Q14061 63 aa9.74□□□□□ -0.85
NCLN-203ENST00000587740 C9orf129Q5T035 196 aaKnown RBP9.74□□□□□ -0.85
NCLN-203ENST00000587740 FAM168BA1KXE4 195 aa9.73□□□□□ -0.85
NCLN-203ENST00000587740 KRTAP10-8P60410 259 aa9.73□□□□□ -0.85
NCLN-203ENST00000587740 HERV-K104P63124 156 aa9.73□□□□□ -0.85
NCLN-203ENST00000587740 HIST1H2BLQ99880 126 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms