RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 TRBV7-4A0A0J9YYF1 115 aa7.11□□□□□ -1.27
ZNF540-203ENST00000586134 CD28P10747 220 aa7.11□□□□□ -1.27
ZNF540-203ENST00000586134 CCL3L1P16619 93 aa7.11□□□□□ -1.27
ZNF540-203ENST00000586134 S100A4P26447 101 aaKnown RBP7.11□□□□□ -1.27
ZNF540-203ENST00000586134 PIK3CD-AS1Q5SR53 167 aa7.11□□□□□ -1.27
ZNF540-203ENST00000586134 OPRPNQ99935 248 aaPredicted RBP7.11□□□□□ -1.27
ZNF540-203ENST00000586134 ZNF580Q9UK33 172 aa7.11□□□□□ -1.27
ZNF540-203ENST00000586134 SMAD5-AS1Q9Y6J3 95 aa7.11□□□□□ -1.27
ZNF540-203ENST00000586134 F6UB75 175 aa7.11□□□□□ -1.27
ZNF540-203ENST00000586134 IGF1P05019 195 aa7.11□□□□□ -1.27
ZNF540-203ENST00000586134 C20orf203Q8NBC4 194 aa7.11□□□□□ -1.27
ZNF540-203ENST00000586134 ZNF625Q96I27 306 aaPredicted RBP7.11□□□□□ -1.27
ZNF540-203ENST00000586134 KIF25-AS1Q9Y6Z4 181 aa7.11□□□□□ -1.27
ZNF540-203ENST00000586134 VWFP04275 2813 aa7.1□□□□□ -1.27
ZNF540-203ENST00000586134 KRTAP10-3P60369 221 aa7.1□□□□□ -1.27
ZNF540-203ENST00000586134 UBE2BP63146 152 aa7.1□□□□□ -1.27
ZNF540-203ENST00000586134 TRAV21A0A0B4J279 112 aa7.1□□□□□ -1.27
ZNF540-203ENST00000586134 A6NDX4 124 aa7.1□□□□□ -1.27
ZNF540-203ENST00000586134 PRAC2D3DTV9 90 aa7.1□□□□□ -1.27
ZNF540-203ENST00000586134 LINC00315P59091 139 aa7.1□□□□□ -1.27
ZNF540-203ENST00000586134 CMYA5Q8N3K9 4069 aa7.09□□□□□ -1.27
ZNF540-203ENST00000586134 M0R378 163 aa7.09□□□□□ -1.27
ZNF540-203ENST00000586134 COX7A1P24310 79 aa7.09□□□□□ -1.27
ZNF540-203ENST00000586134 Q6ZVQ6 151 aa7.09□□□□□ -1.27
ZNF540-203ENST00000586134 WFDC9Q8NEX5 89 aa7.09□□□□□ -1.27
ZNF540-203ENST00000586134 LINC00588Q9Y4M8 146 aa7.09□□□□□ -1.27
ZNF540-203ENST00000586134 IGLV1-47P01700 117 aa7.08□□□□□ -1.28
ZNF540-203ENST00000586134 CTSGP08311 255 aa7.08□□□□□ -1.28
ZNF540-203ENST00000586134 FUSP35637 526 aaKnown RBP eCLIP7.08□□□□□ -1.28
ZNF540-203ENST00000586134 NDPQ00604 133 aa7.08□□□□□ -1.28
ZNF540-203ENST00000586134 PRB3Q04118 309 aaPredicted RBP7.08□□□□□ -1.28
ZNF540-203ENST00000586134 C9orf129Q5T035 196 aaKnown RBP7.08□□□□□ -1.28
ZNF540-203ENST00000586134 ORMDL1Q9P0S3 153 aa7.08□□□□□ -1.28
ZNF540-203ENST00000586134 SUMO4Q6EEV6 95 aa7.08□□□□□ -1.28
ZNF540-203ENST00000586134 DPM3Q9P2X0 92 aa7.08□□□□□ -1.28
ZNF540-203ENST00000586134 NOTCH1P46531 2555 aa7.08□□□□□ -1.28
ZNF540-203ENST00000586134 UBE2L6O14933 153 aa7.07□□□□□ -1.28
ZNF540-203ENST00000586134 TMEM254Q8TBM7 123 aa7.07□□□□□ -1.28
ZNF540-203ENST00000586134 RNF5Q99942 180 aa7.07□□□□□ -1.28
ZNF540-203ENST00000586134 ZNF702PQ9H963 129 aa7.07□□□□□ -1.28
ZNF540-203ENST00000586134 PLXNB1O43157 2135 aa7.07□□□□□ -1.28
ZNF540-203ENST00000586134 NCR3O14931 201 aa7.06□□□□□ -1.28
ZNF540-203ENST00000586134 CXCL6P80162 114 aa7.06□□□□□ -1.28
ZNF540-203ENST00000586134 LY6EQ16553 131 aa7.06□□□□□ -1.28
ZNF540-203ENST00000586134 IGFL4Q6B9Z1 124 aa7.06□□□□□ -1.28
ZNF540-203ENST00000586134 UNQ9165/PRO28630Q6UXU0 137 aa7.06□□□□□ -1.28
ZNF540-203ENST00000586134 Q6ZTC4 211 aa7.06□□□□□ -1.28
ZNF540-203ENST00000586134 PHF5AQ7RTV0 110 aaKnown RBP7.06□□□□□ -1.28
ZNF540-203ENST00000586134 H3BS24 57 aa7.06□□□□□ -1.28
ZNF540-203ENST00000586134 MIR7-3HGQ8N6C7 128 aa7.06□□□□□ -1.28
ZNF540-203ENST00000586134 CRPP02741 224 aa7.05□□□□□ -1.28
ZNF540-203ENST00000586134 APELAP0DMC3 54 aa7.05□□□□□ -1.28
ZNF540-203ENST00000586134 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.05□□□□□ -1.28
ZNF540-203ENST00000586134 TRAV10A0A0B4J240 114 aa7.05□□□□□ -1.28
ZNF540-203ENST00000586134 hDV103S1A0JD37 113 aa7.05□□□□□ -1.28
ZNF540-203ENST00000586134 PRYO14603 147 aa7.05□□□□□ -1.28
ZNF540-203ENST00000586134 A0A087WYN8 130 aa7.04□□□□□ -1.28
ZNF540-203ENST00000586134 A0A087WZ39 114 aa7.04□□□□□ -1.28
ZNF540-203ENST00000586134 IGLV5-45A0A087WSX0 123 aa7.03□□□□□ -1.28
ZNF540-203ENST00000586134 RPL11P62913 178 aaKnown RBP7.03□□□□□ -1.28
ZNF540-203ENST00000586134 KPRPQ5T749 579 aaPredicted RBP7.03□□□□□ -1.28
ZNF540-203ENST00000586134 C8orf87E5RJ46 101 aa7.03□□□□□ -1.28
ZNF540-203ENST00000586134 NREPQ16612 68 aa7.03□□□□□ -1.28
ZNF540-203ENST00000586134 Q6ZRP5 223 aa7.03□□□□□ -1.28
ZNF540-203ENST00000586134 Q8N6K4 173 aa7.03□□□□□ -1.28
ZNF540-203ENST00000586134 F5H697 171 aa7.02□□□□□ -1.29
ZNF540-203ENST00000586134 TMEM256-PLSCR3K7ERE1 68 aa7.02□□□□□ -1.29
ZNF540-203ENST00000586134 ZNF73O43830 326 aaPredicted RBP7.02□□□□□ -1.29
ZNF540-203ENST00000586134 RNASE3P12724 160 aaKnown RBP7.02□□□□□ -1.29
ZNF540-203ENST00000586134 LINC00167Q96N53 147 aa7.02□□□□□ -1.29
ZNF540-203ENST00000586134 LINC01547P58512 204 aaPredicted RBP7.01□□□□□ -1.29
ZNF540-203ENST00000586134 IGLV11-55A0A075B6I3 123 aa7.01□□□□□ -1.29
ZNF540-203ENST00000586134 IGLV5-39A0A0G2JS06 123 aa7.01□□□□□ -1.29
ZNF540-203ENST00000586134 IGKV2-29A2NJV5 120 aaPredicted RBP7.01□□□□□ -1.29
ZNF540-203ENST00000586134 K7EMT4 169 aa7.01□□□□□ -1.29
ZNF540-203ENST00000586134 KHDC1LQ5JSQ8 128 aa7.01□□□□□ -1.29
ZNF540-203ENST00000586134 C11orf44Q8N8P7 122 aa7.01□□□□□ -1.29
ZNF540-203ENST00000586134 IGHV1-3A0A0C4DH29 117 aa7□□□□□ -1.29
ZNF540-203ENST00000586134 F8W735 103 aaPredicted RBP7□□□□□ -1.29
ZNF540-203ENST00000586134 LECT2O14960 151 aa7□□□□□ -1.29
ZNF540-203ENST00000586134 PRR9Q5T870 116 aa7□□□□□ -1.29
ZNF540-203ENST00000586134 ATP11AUNQ6ZP68 121 aa7□□□□□ -1.29
ZNF540-203ENST00000586134 ZFAND2AQ8N6M9 145 aa7□□□□□ -1.29
ZNF540-203ENST00000586134 Q9H8V8 135 aa7□□□□□ -1.29
ZNF540-203ENST00000586134 M0QY20 66 aa7□□□□□ -1.29
ZNF540-203ENST00000586134 VPREB1P12018 145 aa7□□□□□ -1.29
ZNF540-203ENST00000586134 UBE2AP49459 152 aa7□□□□□ -1.29
ZNF540-203ENST00000586134 TGP01266 2768 aa6.99□□□□□ -1.29
ZNF540-203ENST00000586134 SYCNQ0VAF6 134 aa6.99□□□□□ -1.29
ZNF540-203ENST00000586134 Q8N3U1 123 aa6.99□□□□□ -1.29
ZNF540-203ENST00000586134 SMIM11BQ8TCY0 68 aa6.99□□□□□ -1.29
ZNF540-203ENST00000586134 TRAV22A0A0B4J277 110 aa6.98□□□□□ -1.29
ZNF540-203ENST00000586134 CLEC19AQ6UXS0 136 aa6.98□□□□□ -1.29
ZNF540-203ENST00000586134 C11orf72Q8NBR9 251 aa6.98□□□□□ -1.29
ZNF540-203ENST00000586134 FAM104AQ969W3 186 aa6.98□□□□□ -1.29
ZNF540-203ENST00000586134 NOTCH3Q9UM47 2321 aa6.98□□□□□ -1.29
ZNF540-203ENST00000586134 LOC110117498A0A087WWA1 95 aa6.98□□□□□ -1.29
ZNF540-203ENST00000586134 LCA10Q71F78 164 aa6.98□□□□□ -1.29
ZNF540-203ENST00000586134 C5orf56Q8N8D9 126 aa6.98□□□□□ -1.29
ZNF540-203ENST00000586134 IGHV3-72A0A0B4J1Y9 119 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms