RNA–Protein interactions for RNA: ENST00000585229.1

SMCHD1-212, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-212ENST00000585229 LEPROTO15243 131 aa6.54□□□□□ -1.36
SMCHD1-212ENST00000585229 C5orf38Q86SI9 138 aa6.54□□□□□ -1.36
SMCHD1-212ENST00000585229 TM2D2Q9BX73 214 aa6.54□□□□□ -1.36
SMCHD1-212ENST00000585229 HYDINQ4G0P3 5121 aa6.53□□□□□ -1.36
SMCHD1-212ENST00000585229 IGHV3-64A0A075B6Q5 118 aa6.53□□□□□ -1.36
SMCHD1-212ENST00000585229 IGKV2D-26A0A0A0MRZ7 120 aa6.53□□□□□ -1.36
SMCHD1-212ENST00000585229 SPINK8P0C7L1 97 aa6.53□□□□□ -1.36
SMCHD1-212ENST00000585229 PTTG1IPP53801 180 aa6.53□□□□□ -1.36
SMCHD1-212ENST00000585229 MAPKAPK5-AS1Q8N8E1 139 aa6.53□□□□□ -1.36
SMCHD1-212ENST00000585229 PLEKHB2Q96CS7 222 aa6.53□□□□□ -1.36
SMCHD1-212ENST00000585229 C12orf57Q99622 126 aa6.53□□□□□ -1.36
SMCHD1-212ENST00000585229 RYR2Q92736 4967 aa6.52□□□□□ -1.37
SMCHD1-212ENST00000585229 KRTAP23-1A1A580 65 aa6.52□□□□□ -1.37
SMCHD1-212ENST00000585229 APOMO95445 188 aa6.52□□□□□ -1.37
SMCHD1-212ENST00000585229 TSPEAR-AS2P59090 65 aa6.52□□□□□ -1.37
SMCHD1-212ENST00000585229 S100A12P80511 92 aa6.52□□□□□ -1.37
SMCHD1-212ENST00000585229 KIAA0087Q14695 138 aa6.52□□□□□ -1.37
SMCHD1-212ENST00000585229 SPATA45Q537H7 98 aa6.52□□□□□ -1.37
SMCHD1-212ENST00000585229 LCE5AQ5TCM9 118 aa6.52□□□□□ -1.37
SMCHD1-212ENST00000585229 C15orf56Q8N910 161 aa6.52□□□□□ -1.37
SMCHD1-212ENST00000585229 PAM16Q9Y3D7 125 aa6.52□□□□□ -1.37
SMCHD1-212ENST00000585229 GCSHP23434 173 aa6.51□□□□□ -1.37
SMCHD1-212ENST00000585229 Q8IZM0 81 aa6.51□□□□□ -1.37
SMCHD1-212ENST00000585229 C6orf223Q8N319 242 aa6.51□□□□□ -1.37
SMCHD1-212ENST00000585229 FRAS1Q86XX4 4008 aa6.51□□□□□ -1.37
SMCHD1-212ENST00000585229 GVQW2A0A096LPI5 108 aaPredicted RBP6.5□□□□□ -1.37
SMCHD1-212ENST00000585229 J3QQQ9 107 aa6.5□□□□□ -1.37
SMCHD1-212ENST00000585229 M0R2N4 97 aa6.5□□□□□ -1.37
SMCHD1-212ENST00000585229 NMUP48645 174 aa6.5□□□□□ -1.37
SMCHD1-212ENST00000585229 CFAP161Q6P656 301 aa6.5□□□□□ -1.37
SMCHD1-212ENST00000585229 COX7B2Q8TF08 81 aa6.5□□□□□ -1.37
SMCHD1-212ENST00000585229 ORAOV1Q8WV07 137 aa6.5□□□□□ -1.37
SMCHD1-212ENST00000585229 KMT2CQ8NEZ4 4911 aaKnown RBP6.5□□□□□ -1.37
SMCHD1-212ENST00000585229 NDUFA1O15239 70 aa6.49□□□□□ -1.37
SMCHD1-212ENST00000585229 DLEU1O43261 78 aa6.49□□□□□ -1.37
SMCHD1-212ENST00000585229 COX8AP10176 69 aa6.49□□□□□ -1.37
SMCHD1-212ENST00000585229 CXCL5P42830 114 aa6.49□□□□□ -1.37
SMCHD1-212ENST00000585229 SPAG11BQ08648 103 aa6.49□□□□□ -1.37
SMCHD1-212ENST00000585229 BOD1L2Q8IYS8 172 aa6.49□□□□□ -1.37
SMCHD1-212ENST00000585229 ZNF625Q96I27 306 aaPredicted RBP6.49□□□□□ -1.37
SMCHD1-212ENST00000585229 LRCOL1A6NCL2 159 aa6.48□□□□□ -1.37
SMCHD1-212ENST00000585229 USP17L23D6RBM5 183 aa6.48□□□□□ -1.37
SMCHD1-212ENST00000585229 F8WDY8 70 aa6.48□□□□□ -1.37
SMCHD1-212ENST00000585229 LGALS3P17931 250 aaKnown RBP6.48□□□□□ -1.37
SMCHD1-212ENST00000585229 C1orf134Q5TEV5 83 aa6.48□□□□□ -1.37
SMCHD1-212ENST00000585229 SFTA2Q6UW10 78 aa6.48□□□□□ -1.37
SMCHD1-212ENST00000585229 PCP2Q8IVA1 136 aa6.48□□□□□ -1.37
SMCHD1-212ENST00000585229 NTN5Q8WTR8 489 aaPredicted RBP6.48□□□□□ -1.37
SMCHD1-212ENST00000585229 C2orf48Q96LS8 159 aa6.48□□□□□ -1.37
SMCHD1-212ENST00000585229 DNAH11Q96DT5 4516 aa6.47□□□□□ -1.37
SMCHD1-212ENST00000585229 PSCAO43653 123 aa6.47□□□□□ -1.37
SMCHD1-212ENST00000585229 PRSS2P07478 247 aa6.47□□□□□ -1.37
SMCHD1-212ENST00000585229 WFDC2Q14508 124 aa6.47□□□□□ -1.37
SMCHD1-212ENST00000585229 SVIPQ8NHG7 77 aa6.47□□□□□ -1.37
SMCHD1-212ENST00000585229 NDUFA12Q9UI09 145 aa6.47□□□□□ -1.37
SMCHD1-212ENST00000585229 MYMXA0A1B0GTQ4 84 aa6.46□□□□□ -1.38
SMCHD1-212ENST00000585229 ZNF815PA8K554 130 aa6.46□□□□□ -1.38
SMCHD1-212ENST00000585229 C14orf177Q52M58 125 aa6.46□□□□□ -1.38
SMCHD1-212ENST00000585229 SLC25A34Q6PIV7 304 aa6.46□□□□□ -1.38
SMCHD1-212ENST00000585229 C14orf144Q96I85 54 aa6.46□□□□□ -1.38
SMCHD1-212ENST00000585229 TTTY13Q9BZ97 58 aa6.46□□□□□ -1.38
SMCHD1-212ENST00000585229 TOMM7Q9P0U1 55 aa6.46□□□□□ -1.38
SMCHD1-212ENST00000585229 RTL8CO15255 209 aa6.45□□□□□ -1.38
SMCHD1-212ENST00000585229 HERV-K104P63124 156 aa6.45□□□□□ -1.38
SMCHD1-212ENST00000585229 HIGD2BQ4VC39 106 aa6.45□□□□□ -1.38
SMCHD1-212ENST00000585229 C6orf226Q5I0X4 101 aa6.45□□□□□ -1.38
SMCHD1-212ENST00000585229 UQCR10Q9UDW1 63 aa6.45□□□□□ -1.38
SMCHD1-212ENST00000585229 HECTD4Q9Y4D8 3996 aa6.44□□□□□ -1.38
SMCHD1-212ENST00000585229 A0A0J9YXY3 114 aa6.44□□□□□ -1.38
SMCHD1-212ENST00000585229 CNBPP62633 177 aaKnown RBP6.44□□□□□ -1.38
SMCHD1-212ENST00000585229 C2orf82Q6UX34 121 aa6.44□□□□□ -1.38
SMCHD1-212ENST00000585229 Q8N1X5 172 aa6.44□□□□□ -1.38
SMCHD1-212ENST00000585229 TP73-AS1Q9UF72 201 aa6.44□□□□□ -1.38
SMCHD1-212ENST00000585229 FAT2Q9NYQ8 4349 aa6.44□□□□□ -1.38
SMCHD1-212ENST00000585229 A0A087WTM6 91 aa6.43□□□□□ -1.38
SMCHD1-212ENST00000585229 TRBV30A0A0K0K1B3 111 aa6.43□□□□□ -1.38
SMCHD1-212ENST00000585229 LECT2O14960 151 aa6.43□□□□□ -1.38
SMCHD1-212ENST00000585229 TIMM17BO60830 172 aa6.43□□□□□ -1.38
SMCHD1-212ENST00000585229 CKS1BP61024 79 aa6.43□□□□□ -1.38
SMCHD1-212ENST00000585229 C10orf25Q5T742 122 aa6.43□□□□□ -1.38
SMCHD1-212ENST00000585229 C2orf91Q6ZV80 131 aa6.43□□□□□ -1.38
SMCHD1-212ENST00000585229 MIEN1Q9BRT3 115 aa6.43□□□□□ -1.38
SMCHD1-212ENST00000585229 PRO1933Q9H354 126 aa6.43□□□□□ -1.38
SMCHD1-212ENST00000585229 HIGD1BQ9P298 99 aa6.43□□□□□ -1.38
SMCHD1-212ENST00000585229 TSTD3H0UI37 97 aa6.42□□□□□ -1.38
SMCHD1-212ENST00000585229 SLPIP03973 132 aa6.42□□□□□ -1.38
SMCHD1-212ENST00000585229 SYCNQ0VAF6 134 aa6.42□□□□□ -1.38
SMCHD1-212ENST00000585229 UNQ6190/PRO20217Q6UXQ8 127 aa6.42□□□□□ -1.38
SMCHD1-212ENST00000585229 Q6ZRU5 148 aa6.42□□□□□ -1.38
SMCHD1-212ENST00000585229 Q8N814 137 aa6.42□□□□□ -1.38
SMCHD1-212ENST00000585229 LINC00526Q96FQ7 95 aa6.42□□□□□ -1.38
SMCHD1-212ENST00000585229 CAMK2N2Q96S95 79 aa6.42□□□□□ -1.38
SMCHD1-212ENST00000585229 LITAFQ99732 161 aa6.42□□□□□ -1.38
SMCHD1-212ENST00000585229 C6orf48Q9UBA6 75 aa6.42□□□□□ -1.38
SMCHD1-212ENST00000585229 DNAH5Q8TE73 4624 aa6.41□□□□□ -1.38
SMCHD1-212ENST00000585229 LINC00587B1AMM8 73 aa6.41□□□□□ -1.38
SMCHD1-212ENST00000585229 CARD19Q96LW7 228 aa6.41□□□□□ -1.38
SMCHD1-212ENST00000585229 SPANXB1Q9NS25 103 aaPredicted RBP6.41□□□□□ -1.38
SMCHD1-212ENST00000585229 COX17Q14061 63 aa6.4□□□□□ -1.38
SMCHD1-212ENST00000585229 SCGB1D4Q6XE38 83 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms