RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 UQCR10Q9UDW1 63 aa11.24□□□□□ -0.61
TOP3A-220ENST00000585031 COX6A2Q02221 97 aa11.23□□□□□ -0.61
TOP3A-220ENST00000585031 MAJINQ3KP22 176 aa11.23□□□□□ -0.61
TOP3A-220ENST00000585031 MRPL35Q9NZE8 188 aaKnown RBP11.23□□□□□ -0.61
TOP3A-220ENST00000585031 IGLC3P0DOY3 106 aa11.22□□□□□ -0.61
TOP3A-220ENST00000585031 LCE2AQ5TA79 106 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-220ENST00000585031 REG3GQ6UW15 175 aa11.22□□□□□ -0.61
TOP3A-220ENST00000585031 SPINK6Q6UWN8 80 aa11.22□□□□□ -0.61
TOP3A-220ENST00000585031 TIMM21Q9BVV7 248 aa11.22□□□□□ -0.61
TOP3A-220ENST00000585031 VCX2Q9H322 139 aa11.21□□□□□ -0.61
TOP3A-220ENST00000585031 LINC00587B1AMM8 73 aa11.2□□□□□ -0.62
TOP3A-220ENST00000585031 REG3AQ06141 175 aa11.2□□□□□ -0.62
TOP3A-220ENST00000585031 CST9LQ9H4G1 147 aa11.2□□□□□ -0.62
TOP3A-220ENST00000585031 IGLV4-3A0A075B6K6 122 aa11.19□□□□□ -0.62
TOP3A-220ENST00000585031 TRBV25-1A0A075B6N4 114 aa11.19□□□□□ -0.62
TOP3A-220ENST00000585031 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.19□□□□□ -0.62
TOP3A-220ENST00000585031 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.19□□□□□ -0.62
TOP3A-220ENST00000585031 IGKV2-24A0A0C4DH68 120 aa11.19□□□□□ -0.62
TOP3A-220ENST00000585031 IGKV2-29A2NJV5 120 aaPredicted RBP11.19□□□□□ -0.62
TOP3A-220ENST00000585031 UBE2L6O14933 153 aa11.19□□□□□ -0.62
TOP3A-220ENST00000585031 STPG4Q8N801 248 aa11.19□□□□□ -0.62
TOP3A-220ENST00000585031 TMEM243Q9BU79 118 aa11.19□□□□□ -0.62
TOP3A-220ENST00000585031 H7C423 109 aa11.18□□□□□ -0.62
TOP3A-220ENST00000585031 SLC25A34Q6PIV7 304 aa11.18□□□□□ -0.62
TOP3A-220ENST00000585031 C15orf56Q8N910 161 aa11.18□□□□□ -0.62
TOP3A-220ENST00000585031 UBE2D4Q9Y2X8 147 aa11.18□□□□□ -0.62
TOP3A-220ENST00000585031 A0A0U1RQV1 116 aa11.17□□□□□ -0.62
TOP3A-220ENST00000585031 MRPS36P82909 103 aaKnown RBP11.17□□□□□ -0.62
TOP3A-220ENST00000585031 ZC2HC1BQ5TFG8 222 aa11.17□□□□□ -0.62
TOP3A-220ENST00000585031 C14orf144Q96I85 54 aa11.17□□□□□ -0.62
TOP3A-220ENST00000585031 C2orf88Q9BSF0 95 aa11.17□□□□□ -0.62
TOP3A-220ENST00000585031 IGLV4-60A0A075B6I1 120 aa11.16□□□□□ -0.62
TOP3A-220ENST00000585031 COX8AP10176 69 aa11.16□□□□□ -0.62
TOP3A-220ENST00000585031 HERVK_113P61574 105 aa11.16□□□□□ -0.62
TOP3A-220ENST00000585031 ANKRD39Q53RE8 183 aa11.16□□□□□ -0.62
TOP3A-220ENST00000585031 MRPL52Q86TS9 123 aaKnown RBP11.16□□□□□ -0.62
TOP3A-220ENST00000585031 AMMECR1LQ6DCA0 310 aa11.15□□□□□ -0.62
TOP3A-220ENST00000585031 TMEM101Q96IK0 257 aa11.15□□□□□ -0.62
TOP3A-220ENST00000585031 AMELXQ99217 191 aa11.15□□□□□ -0.62
TOP3A-220ENST00000585031 CSDC2Q9Y534 153 aaKnown RBP11.15□□□□□ -0.62
TOP3A-220ENST00000585031 A0A096LNI7 61 aa11.14□□□□□ -0.63
TOP3A-220ENST00000585031 FGF6P10767 208 aa11.14□□□□□ -0.63
TOP3A-220ENST00000585031 OPRPNQ99935 248 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-220ENST00000585031 IGLV4-69A0A075B6H9 119 aa11.13□□□□□ -0.63
TOP3A-220ENST00000585031 TRAV8-4A0A0B4J246 113 aa11.13□□□□□ -0.63
TOP3A-220ENST00000585031 ZNF25P17030 456 aaPredicted RBP11.13□□□□□ -0.63
TOP3A-220ENST00000585031 NMUP48645 174 aa11.13□□□□□ -0.63
TOP3A-220ENST00000585031 OR5A1Q8NGJ0 315 aa11.13□□□□□ -0.63
TOP3A-220ENST00000585031 C11orf86A6NJI1 115 aa11.12□□□□□ -0.63
TOP3A-220ENST00000585031 DLEU1O43261 78 aa11.12□□□□□ -0.63
TOP3A-220ENST00000585031 HIGD2BQ4VC39 106 aa11.12□□□□□ -0.63
TOP3A-220ENST00000585031 Q6ZUT4 128 aa11.12□□□□□ -0.63
TOP3A-220ENST00000585031 TMEM170BQ5T4T1 132 aa11.1□□□□□ -0.63
TOP3A-220ENST00000585031 BOD1L2Q8IYS8 172 aa11.1□□□□□ -0.63
TOP3A-220ENST00000585031 E9PLD3 99 aa11.09□□□□□ -0.63
TOP3A-220ENST00000585031 SEC11AP67812 179 aa11.09□□□□□ -0.63
TOP3A-220ENST00000585031 A0A1B0GUV1 79 aa11.08□□□□□ -0.64
TOP3A-220ENST00000585031 TINCRA0A1B0GVN0 87 aa11.08□□□□□ -0.64
TOP3A-220ENST00000585031 GAGE12HA6NDE8 117 aa11.08□□□□□ -0.64
TOP3A-220ENST00000585031 M0R143 59 aa11.08□□□□□ -0.64
TOP3A-220ENST00000585031 CTAG1AP78358 180 aa11.08□□□□□ -0.64
TOP3A-220ENST00000585031 RNASE13Q5GAN3 156 aaKnown RBP11.07□□□□□ -0.64
TOP3A-220ENST00000585031 Q6ZRP5 223 aa11.07□□□□□ -0.64
TOP3A-220ENST00000585031 FAM104AQ969W3 186 aa11.07□□□□□ -0.64
TOP3A-220ENST00000585031 GEMIN7Q9H840 131 aaKnown RBP11.07□□□□□ -0.64
TOP3A-220ENST00000585031 CDC42SE2Q9NRR3 84 aa11.07□□□□□ -0.64
TOP3A-220ENST00000585031 IGKV2D-26A0A0A0MRZ7 120 aa11.06□□□□□ -0.64
TOP3A-220ENST00000585031 ZNF22P17026 224 aaPredicted RBP11.06□□□□□ -0.64
TOP3A-220ENST00000585031 UBE2D1P51668 147 aa11.06□□□□□ -0.64
TOP3A-220ENST00000585031 H3BRM9 83 aa11.05□□□□□ -0.64
TOP3A-220ENST00000585031 LBHQ53QV2 105 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-220ENST00000585031 PCP2Q8IVA1 136 aa11.05□□□□□ -0.64
TOP3A-220ENST00000585031 TMEM223A0PJW6 202 aa11.04□□□□□ -0.64
TOP3A-220ENST00000585031 HERVK_113P63121 156 aa11.04□□□□□ -0.64
TOP3A-220ENST00000585031 FAM19A3Q7Z5A8 133 aa11.04□□□□□ -0.64
TOP3A-220ENST00000585031 PLEKHB2Q96CS7 222 aa11.04□□□□□ -0.64
TOP3A-220ENST00000585031 LEPROTO15243 131 aa11.03□□□□□ -0.64
TOP3A-220ENST00000585031 LINC00469Q8N7U9 141 aa11.03□□□□□ -0.64
TOP3A-220ENST00000585031 PRR26Q8N8Z3 221 aa11.03□□□□□ -0.64
TOP3A-220ENST00000585031 GVQW2A0A096LPI5 108 aaPredicted RBP11.02□□□□□ -0.65
TOP3A-220ENST00000585031 CFAP161Q6P656 301 aa11.02□□□□□ -0.65
TOP3A-220ENST00000585031 LINC00526Q96FQ7 95 aa11.02□□□□□ -0.65
TOP3A-220ENST00000585031 HIGD1BQ9P298 99 aa11.02□□□□□ -0.65
TOP3A-220ENST00000585031 IGKV3OR2-268A0A0C4DH90 116 aa11.01□□□□□ -0.65
TOP3A-220ENST00000585031 MYMXA0A1B0GTQ4 84 aa11.01□□□□□ -0.65
TOP3A-220ENST00000585031 LGALS3P17931 250 aaKnown RBP11.01□□□□□ -0.65
TOP3A-220ENST00000585031 C2orf91Q6ZV80 131 aa11.01□□□□□ -0.65
TOP3A-220ENST00000585031 IGLV5-45A0A087WSX0 123 aa11□□□□□ -0.65
TOP3A-220ENST00000585031 TRAV13-1A0A0B4J241 112 aa11□□□□□ -0.65
TOP3A-220ENST00000585031 SNHG12Q9BXW3 62 aa11□□□□□ -0.65
TOP3A-220ENST00000585031 TP73-AS1Q9UF72 201 aa11□□□□□ -0.65
TOP3A-220ENST00000585031 PSORS1C2Q9UIG4 136 aa11□□□□□ -0.65
TOP3A-220ENST00000585031 ZNF815PA8K554 130 aa10.99□□□□□ -0.65
TOP3A-220ENST00000585031 J3QQQ9 107 aa10.99□□□□□ -0.65
TOP3A-220ENST00000585031 HSD52Q0P140 79 aa10.99□□□□□ -0.65
TOP3A-220ENST00000585031 BATFQ16520 125 aa10.99□□□□□ -0.65
TOP3A-220ENST00000585031 CHCHD10Q8WYQ3 142 aaPredicted RBP10.99□□□□□ -0.65
TOP3A-220ENST00000585031 A0A1W2PNN7 141 aa10.98□□□□□ -0.65
TOP3A-220ENST00000585031 LINC00242Q5T6M2 205 aa10.98□□□□□ -0.65
TOP3A-220ENST00000585031 TTTY13Q9BZ97 58 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms