RNA–Protein interactions for RNA: ENST00000584527.1

SPECC1-223, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 3 BASIC

Gene SPECC1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-223ENST00000584527 HIST1H2BHQ93079 126 aa9.65□□□□□ -0.86
SPECC1-223ENST00000584527 PACRGQ96M98 296 aaPredicted RBP9.65□□□□□ -0.86
SPECC1-223ENST00000584527 HIST1H2BNQ99877 126 aa9.65□□□□□ -0.86
SPECC1-223ENST00000584527 HIST1H2BMQ99879 126 aa9.65□□□□□ -0.86
SPECC1-223ENST00000584527 IGLC3P0DOY3 106 aa9.64□□□□□ -0.87
SPECC1-223ENST00000584527 HNRNPA3P51991 378 aaKnown RBP9.64□□□□□ -0.87
SPECC1-223ENST00000584527 RNF151Q2KHN1 245 aa9.64□□□□□ -0.87
SPECC1-223ENST00000584527 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.64□□□□□ -0.87
SPECC1-223ENST00000584527 PKHD1L1Q86WI1 4243 aa9.64□□□□□ -0.87
SPECC1-223ENST00000584527 TRAV12-1A0A0B4J245 112 aa9.63□□□□□ -0.87
SPECC1-223ENST00000584527 NDUFA1O15239 70 aa9.63□□□□□ -0.87
SPECC1-223ENST00000584527 PRSS2P07478 247 aa9.63□□□□□ -0.87
SPECC1-223ENST00000584527 KIAA0087Q14695 138 aa9.63□□□□□ -0.87
SPECC1-223ENST00000584527 Q6ZRU5 148 aa9.63□□□□□ -0.87
SPECC1-223ENST00000584527 H3BRM9 83 aa9.62□□□□□ -0.87
SPECC1-223ENST00000584527 NUPR1O60356 82 aa9.62□□□□□ -0.87
SPECC1-223ENST00000584527 LEPROTL1O95214 131 aa9.62□□□□□ -0.87
SPECC1-223ENST00000584527 Q8IZM0 81 aa9.62□□□□□ -0.87
SPECC1-223ENST00000584527 MRPL35Q9NZE8 188 aaKnown RBP9.62□□□□□ -0.87
SPECC1-223ENST00000584527 HSPB8Q9UJY1 196 aa9.62□□□□□ -0.87
SPECC1-223ENST00000584527 PANO1I0J062 215 aa9.61□□□□□ -0.87
SPECC1-223ENST00000584527 CHTOPQ9Y3Y2 248 aaKnown RBP9.61□□□□□ -0.87
SPECC1-223ENST00000584527 LOC107984640A0A0U1RRK4 108 aa9.6□□□□□ -0.87
SPECC1-223ENST00000584527 SMIM1B2RUZ4 78 aa9.6□□□□□ -0.87
SPECC1-223ENST00000584527 C6orf226Q5I0X4 101 aa9.6□□□□□ -0.87
SPECC1-223ENST00000584527 LINC00474Q9P2X8 69 aa9.6□□□□□ -0.87
SPECC1-223ENST00000584527 MT1HL1P0DM35 61 aa9.59□□□□□ -0.87
SPECC1-223ENST00000584527 UNQ6190/PRO20217Q6UXQ8 127 aa9.59□□□□□ -0.87
SPECC1-223ENST00000584527 SPACA4Q8TDM5 124 aa9.59□□□□□ -0.87
SPECC1-223ENST00000584527 TOMM7Q9P0U1 55 aa9.59□□□□□ -0.87
SPECC1-223ENST00000584527 UBR4Q5T4S7 5183 aa9.58□□□□□ -0.88
SPECC1-223ENST00000584527 TRBV30A0A0K0K1B3 111 aa9.58□□□□□ -0.88
SPECC1-223ENST00000584527 ZNF22P17026 224 aaPredicted RBP9.58□□□□□ -0.88
SPECC1-223ENST00000584527 CXCL5P42830 114 aa9.58□□□□□ -0.88
SPECC1-223ENST00000584527 CKS1BP61024 79 aa9.58□□□□□ -0.88
SPECC1-223ENST00000584527 COA6Q5JTJ3 125 aaKnown RBP9.58□□□□□ -0.88
SPECC1-223ENST00000584527 C11orf86A6NJI1 115 aa9.57□□□□□ -0.88
SPECC1-223ENST00000584527 F8VRH5 84 aa9.57□□□□□ -0.88
SPECC1-223ENST00000584527 SPINK8P0C7L1 97 aa9.57□□□□□ -0.88
SPECC1-223ENST00000584527 FABP4P15090 132 aa9.57□□□□□ -0.88
SPECC1-223ENST00000584527 C10orf25Q5T742 122 aa9.57□□□□□ -0.88
SPECC1-223ENST00000584527 COX7B2Q8TF08 81 aa9.57□□□□□ -0.88
SPECC1-223ENST00000584527 DPH3Q96FX2 82 aa9.57□□□□□ -0.88
SPECC1-223ENST00000584527 A0A096LNI7 61 aa9.56□□□□□ -0.88
SPECC1-223ENST00000584527 IGKV2-24A0A0C4DH68 120 aa9.56□□□□□ -0.88
SPECC1-223ENST00000584527 CHTF8P0CG12 524 aa9.56□□□□□ -0.88
SPECC1-223ENST00000584527 TMEM170BQ5T4T1 132 aa9.56□□□□□ -0.88
SPECC1-223ENST00000584527 C2orf82Q6UX34 121 aa9.56□□□□□ -0.88
SPECC1-223ENST00000584527 C6orf48Q9UBA6 75 aa9.56□□□□□ -0.88
SPECC1-223ENST00000584527 IGLV5-39A0A0G2JS06 123 aa9.55□□□□□ -0.88
SPECC1-223ENST00000584527 TLX1NBP0CAT3 122 aa9.55□□□□□ -0.88
SPECC1-223ENST00000584527 PTTG1IPP53801 180 aa9.55□□□□□ -0.88
SPECC1-223ENST00000584527 MAJINQ3KP22 176 aa9.55□□□□□ -0.88
SPECC1-223ENST00000584527 ODF1Q14990 250 aa9.54□□□□□ -0.88
SPECC1-223ENST00000584527 MAP1LC3CQ9BXW4 147 aa9.54□□□□□ -0.88
SPECC1-223ENST00000584527 PLAC8Q9NZF1 115 aa9.54□□□□□ -0.88
SPECC1-223ENST00000584527 A0A087WYN8 130 aa9.53□□□□□ -0.88
SPECC1-223ENST00000584527 H0Y8G0 127 aa9.53□□□□□ -0.88
SPECC1-223ENST00000584527 RPL18AQ02543 176 aaKnown RBP9.53□□□□□ -0.88
SPECC1-223ENST00000584527 GAGE2BQ13066 116 aa9.53□□□□□ -0.88
SPECC1-223ENST00000584527 PLNP26678 52 aa9.52□□□□□ -0.89
SPECC1-223ENST00000584527 STPG4Q8N801 248 aa9.52□□□□□ -0.89
SPECC1-223ENST00000584527 TMEM223A0PJW6 202 aa9.51□□□□□ -0.89
SPECC1-223ENST00000584527 NDUFC2-KCTD14E9PQ53 114 aa9.51□□□□□ -0.89
SPECC1-223ENST00000584527 SFTA2Q6UW10 78 aa9.5□□□□□ -0.89
SPECC1-223ENST00000584527 Q6ZRP5 223 aa9.5□□□□□ -0.89
SPECC1-223ENST00000584527 DPM2O94777 84 aa9.49□□□□□ -0.89
SPECC1-223ENST00000584527 C9orf116Q5BN46 136 aaPredicted RBP9.49□□□□□ -0.89
SPECC1-223ENST00000584527 KRTAP3-3Q9BYR6 98 aa9.49□□□□□ -0.89
SPECC1-223ENST00000584527 KRTAP3-2Q9BYR7 98 aa9.49□□□□□ -0.89
SPECC1-223ENST00000584527 SYS1-DBNDD2H3BUS1 97 aa9.48□□□□□ -0.89
SPECC1-223ENST00000584527 C7orf33Q8WU49 177 aa9.48□□□□□ -0.89
SPECC1-223ENST00000584527 IGKCP01834 107 aa9.47□□□□□ -0.89
SPECC1-223ENST00000584527 GAGE2EQ4V326 116 aa9.47□□□□□ -0.89
SPECC1-223ENST00000584527 PET117Q6UWS5 81 aa9.47□□□□□ -0.89
SPECC1-223ENST00000584527 GAGE2DQ9UEU5 116 aa9.47□□□□□ -0.89
SPECC1-223ENST00000584527 PMCHL2Q9BQD1 86 aa9.45□□□□□ -0.9
SPECC1-223ENST00000584527 A0A1W2PNN7 141 aa9.44□□□□□ -0.9
SPECC1-223ENST00000584527 S100A6P06703 90 aa9.44□□□□□ -0.9
SPECC1-223ENST00000584527 HERVK_113P61574 105 aa9.44□□□□□ -0.9
SPECC1-223ENST00000584527 LINC01545Q5VT33 79 aa9.44□□□□□ -0.9
SPECC1-223ENST00000584527 ZNF625Q96I27 306 aaPredicted RBP9.44□□□□□ -0.9
SPECC1-223ENST00000584527 LINC01600Q96MT4 127 aa9.44□□□□□ -0.9
SPECC1-223ENST00000584527 C3orf79P0CE67 100 aa9.43□□□□□ -0.9
SPECC1-223ENST00000584527 PRR3P79522 188 aaKnown RBP9.43□□□□□ -0.9
SPECC1-223ENST00000584527 COX17Q14061 63 aa9.43□□□□□ -0.9
SPECC1-223ENST00000584527 PLEKHB2Q96CS7 222 aa9.43□□□□□ -0.9
SPECC1-223ENST00000584527 TNXBP22105 4242 aa9.42□□□□□ -0.9
SPECC1-223ENST00000584527 LEPROTO15243 131 aa9.42□□□□□ -0.9
SPECC1-223ENST00000584527 KRTDAPP60985 99 aa9.42□□□□□ -0.9
SPECC1-223ENST00000584527 ERG28Q9UKR5 140 aa9.42□□□□□ -0.9
SPECC1-223ENST00000584527 HERV-K104P63124 156 aa9.41□□□□□ -0.9
SPECC1-223ENST00000584527 C9orf129Q5T035 196 aaKnown RBP9.41□□□□□ -0.9
SPECC1-223ENST00000584527 HIST3H2BBQ8N257 126 aa9.41□□□□□ -0.9
SPECC1-223ENST00000584527 LRP2P98164 4655 aa9.4□□□□□ -0.9
SPECC1-223ENST00000584527 C20orf202A1L168 122 aa9.4□□□□□ -0.9
SPECC1-223ENST00000584527 S100A2P29034 98 aa9.4□□□□□ -0.9
SPECC1-223ENST00000584527 AKR1D1P51857 326 aa9.4□□□□□ -0.9
SPECC1-223ENST00000584527 MYMXA0A1B0GTQ4 84 aa9.39□□□□□ -0.91
SPECC1-223ENST00000584527 FAM168BA1KXE4 195 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms