RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 FOXI1Q12951 378 aa5.5□□□□□ -1.53
ERBB2-216ENST00000584014 HIST2H2BEQ16778 126 aa5.5□□□□□ -1.53
ERBB2-216ENST00000584014 C14orf177Q52M58 125 aa5.5□□□□□ -1.53
ERBB2-216ENST00000584014 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.5□□□□□ -1.53
ERBB2-216ENST00000584014 HIST1H2BHQ93079 126 aa5.5□□□□□ -1.53
ERBB2-216ENST00000584014 LINC00526Q96FQ7 95 aa5.5□□□□□ -1.53
ERBB2-216ENST00000584014 HIST1H2BNQ99877 126 aa5.5□□□□□ -1.53
ERBB2-216ENST00000584014 HIST1H2BMQ99879 126 aa5.5□□□□□ -1.53
ERBB2-216ENST00000584014 DNAH10Q8IVF4 4471 aa5.5□□□□□ -1.53
ERBB2-216ENST00000584014 FRAS1Q86XX4 4008 aa5.49□□□□□ -1.53
ERBB2-216ENST00000584014 A0A0A0MQY5 61 aa5.49□□□□□ -1.53
ERBB2-216ENST00000584014 A0A0J9YXV3 536 aa5.49□□□□□ -1.53
ERBB2-216ENST00000584014 A0A1B0GVY2 172 aa5.49□□□□□ -1.53
ERBB2-216ENST00000584014 PRYO14603 147 aa5.49□□□□□ -1.53
ERBB2-216ENST00000584014 UBE2D1P51668 147 aa5.49□□□□□ -1.53
ERBB2-216ENST00000584014 COX6A2Q02221 97 aa5.49□□□□□ -1.53
ERBB2-216ENST00000584014 LINC00173Q6ZV60 143 aa5.49□□□□□ -1.53
ERBB2-216ENST00000584014 ORAOV1Q8WV07 137 aa5.49□□□□□ -1.53
ERBB2-216ENST00000584014 CST9LQ9H4G1 147 aa5.49□□□□□ -1.53
ERBB2-216ENST00000584014 LEPROTL1O95214 131 aa5.48□□□□□ -1.53
ERBB2-216ENST00000584014 APOMO95445 188 aa5.48□□□□□ -1.53
ERBB2-216ENST00000584014 PLA2G1BP04054 148 aaKnown RBP5.48□□□□□ -1.53
ERBB2-216ENST00000584014 NPSP0C0P6 89 aa5.48□□□□□ -1.53
ERBB2-216ENST00000584014 LINC00310P59036 64 aa5.48□□□□□ -1.53
ERBB2-216ENST00000584014 RPS28P62857 69 aaKnown RBP5.48□□□□□ -1.53
ERBB2-216ENST00000584014 LINC00242Q5T6M2 205 aa5.48□□□□□ -1.53
ERBB2-216ENST00000584014 FAM19A1Q7Z5A9 133 aa5.48□□□□□ -1.53
ERBB2-216ENST00000584014 IFI27L1Q96BM0 104 aa5.48□□□□□ -1.53
ERBB2-216ENST00000584014 AMELXQ99217 191 aa5.48□□□□□ -1.53
ERBB2-216ENST00000584014 TOMM7Q9P0U1 55 aa5.48□□□□□ -1.53
ERBB2-216ENST00000584014 IGHV1-58A0A0C4DH39 117 aa5.47□□□□□ -1.53
ERBB2-216ENST00000584014 C15orf56Q8N910 161 aa5.47□□□□□ -1.53
ERBB2-216ENST00000584014 H3BS24 57 aa5.46□□□□□ -1.54
ERBB2-216ENST00000584014 HERVK_113P63121 156 aa5.46□□□□□ -1.54
ERBB2-216ENST00000584014 SEC11AP67812 179 aa5.46□□□□□ -1.54
ERBB2-216ENST00000584014 OCIAD2Q56VL3 154 aa5.46□□□□□ -1.54
ERBB2-216ENST00000584014 CDKN2A-AS1Q9UH64 79 aa5.46□□□□□ -1.54
ERBB2-216ENST00000584014 HSPB8Q9UJY1 196 aa5.46□□□□□ -1.54
ERBB2-216ENST00000584014 DNAH17Q9UFH2 4485 aa5.46□□□□□ -1.54
ERBB2-216ENST00000584014 IGLV4-69A0A075B6H9 119 aa5.45□□□□□ -1.54
ERBB2-216ENST00000584014 IGHV3-64A0A075B6Q5 118 aa5.45□□□□□ -1.54
ERBB2-216ENST00000584014 IGHV3OR16-9A0A0B4J2B5 98 aa5.45□□□□□ -1.54
ERBB2-216ENST00000584014 PRSS2P07478 247 aa5.45□□□□□ -1.54
ERBB2-216ENST00000584014 SPINK8P0C7L1 97 aa5.45□□□□□ -1.54
ERBB2-216ENST00000584014 XGP55808 180 aa5.45□□□□□ -1.54
ERBB2-216ENST00000584014 SPAG11BQ08648 103 aa5.45□□□□□ -1.54
ERBB2-216ENST00000584014 NTN5Q8WTR8 489 aaPredicted RBP5.45□□□□□ -1.54
ERBB2-216ENST00000584014 DPH3Q96FX2 82 aa5.45□□□□□ -1.54
ERBB2-216ENST00000584014 CAMK2N2Q96S95 79 aa5.45□□□□□ -1.54
ERBB2-216ENST00000584014 CHAC1Q9BUX1 264 aa5.45□□□□□ -1.54
ERBB2-216ENST00000584014 PKD1P98161 4303 aa5.44□□□□□ -1.54
ERBB2-216ENST00000584014 A0A087WZ39 114 aa5.44□□□□□ -1.54
ERBB2-216ENST00000584014 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.44□□□□□ -1.54
ERBB2-216ENST00000584014 KRTAP10-1P60331 282 aa5.44□□□□□ -1.54
ERBB2-216ENST00000584014 TMEM170BQ5T4T1 132 aa5.44□□□□□ -1.54
ERBB2-216ENST00000584014 GVQW2A0A096LPI5 108 aaPredicted RBP5.43□□□□□ -1.54
ERBB2-216ENST00000584014 A0A1B0GX51 115 aa5.43□□□□□ -1.54
ERBB2-216ENST00000584014 H3BRM9 83 aa5.43□□□□□ -1.54
ERBB2-216ENST00000584014 S100A2P29034 98 aa5.43□□□□□ -1.54
ERBB2-216ENST00000584014 HAMPP81172 84 aa5.43□□□□□ -1.54
ERBB2-216ENST00000584014 SYCNQ0VAF6 134 aa5.43□□□□□ -1.54
ERBB2-216ENST00000584014 CARD19Q96LW7 228 aa5.43□□□□□ -1.54
ERBB2-216ENST00000584014 PMCHL2Q9BQD1 86 aa5.43□□□□□ -1.54
ERBB2-216ENST00000584014 KRTAP9-2Q9BYQ4 174 aa5.43□□□□□ -1.54
ERBB2-216ENST00000584014 FAT2Q9NYQ8 4349 aa5.42□□□□□ -1.54
ERBB2-216ENST00000584014 C11orf86A6NJI1 115 aa5.42□□□□□ -1.54
ERBB2-216ENST00000584014 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.42□□□□□ -1.54
ERBB2-216ENST00000584014 SLPIP03973 132 aa5.42□□□□□ -1.54
ERBB2-216ENST00000584014 KRTDAPP60985 99 aa5.42□□□□□ -1.54
ERBB2-216ENST00000584014 C1orf195Q5TG92 126 aa5.42□□□□□ -1.54
ERBB2-216ENST00000584014 C2orf82Q6UX34 121 aa5.42□□□□□ -1.54
ERBB2-216ENST00000584014 OR10D4PQ8NGN7 298 aa5.42□□□□□ -1.54
ERBB2-216ENST00000584014 MRPL35Q9NZE8 188 aaKnown RBP5.42□□□□□ -1.54
ERBB2-216ENST00000584014 SS18L2Q9UHA2 77 aa5.42□□□□□ -1.54
ERBB2-216ENST00000584014 F8VRH5 84 aa5.41□□□□□ -1.54
ERBB2-216ENST00000584014 NDUFA1O15239 70 aa5.41□□□□□ -1.54
ERBB2-216ENST00000584014 IGLC3P0DOY3 106 aa5.41□□□□□ -1.54
ERBB2-216ENST00000584014 ZNF22P17026 224 aaPredicted RBP5.41□□□□□ -1.54
ERBB2-216ENST00000584014 C4orf26Q17RF5 130 aa5.41□□□□□ -1.54
ERBB2-216ENST00000584014 UNQ6190/PRO20217Q6UXQ8 127 aa5.41□□□□□ -1.54
ERBB2-216ENST00000584014 Q6ZRU5 148 aa5.41□□□□□ -1.54
ERBB2-216ENST00000584014 FAM19A3Q7Z5A8 133 aa5.41□□□□□ -1.54
ERBB2-216ENST00000584014 PCLOQ9Y6V0 5065 aa5.4□□□□□ -1.54
ERBB2-216ENST00000584014 TRAV12-1A0A0B4J245 112 aa5.4□□□□□ -1.54
ERBB2-216ENST00000584014 IGKV2-24A0A0C4DH68 120 aa5.4□□□□□ -1.54
ERBB2-216ENST00000584014 A0A0U1RQV1 116 aa5.4□□□□□ -1.54
ERBB2-216ENST00000584014 CNBPP62633 177 aaKnown RBP5.4□□□□□ -1.54
ERBB2-216ENST00000584014 RPL18AQ02543 176 aaKnown RBP5.4□□□□□ -1.54
ERBB2-216ENST00000584014 COA6Q5JTJ3 125 aaKnown RBP5.4□□□□□ -1.54
ERBB2-216ENST00000584014 C9orf163Q8N9P6 203 aa5.4□□□□□ -1.54
ERBB2-216ENST00000584014 COX7B2Q8TF08 81 aa5.4□□□□□ -1.54
ERBB2-216ENST00000584014 KRTAP9-6A0A140TA67 174 aa5.39□□□□□ -1.55
ERBB2-216ENST00000584014 A6NDN8 102 aa5.39□□□□□ -1.55
ERBB2-216ENST00000584014 SMIM1B2RUZ4 78 aa5.39□□□□□ -1.55
ERBB2-216ENST00000584014 SYS1-DBNDD2H3BUS1 97 aa5.39□□□□□ -1.55
ERBB2-216ENST00000584014 DPM2O94777 84 aa5.39□□□□□ -1.55
ERBB2-216ENST00000584014 CHTF8P0CG12 524 aa5.39□□□□□ -1.55
ERBB2-216ENST00000584014 HNRNPA3P51991 378 aaKnown RBP5.39□□□□□ -1.55
ERBB2-216ENST00000584014 RPL24P83731 157 aaKnown RBP5.39□□□□□ -1.55
ERBB2-216ENST00000584014 COL5A1-AS1Q5SY13 56 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms