RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 MRPL35Q9NZE8 188 aaKnown RBP4.68□□□□□ -1.66
SMCHD1-210ENST00000583800 FAT4Q6V0I7 4981 aa4.67□□□□□ -1.66
SMCHD1-210ENST00000583800 IGLV1-50A0A075B6I6 118 aa4.67□□□□□ -1.66
SMCHD1-210ENST00000583800 NDUFA1O15239 70 aa4.67□□□□□ -1.66
SMCHD1-210ENST00000583800 S100A6P06703 90 aa4.67□□□□□ -1.66
SMCHD1-210ENST00000583800 UBE2D1P51668 147 aa4.67□□□□□ -1.66
SMCHD1-210ENST00000583800 SMAGPQ0VAQ4 97 aa4.67□□□□□ -1.66
SMCHD1-210ENST00000583800 KRTAP7-1Q8IUC3 87 aa4.67□□□□□ -1.66
SMCHD1-210ENST00000583800 KIR2DL4Q99706 377 aa4.67□□□□□ -1.66
SMCHD1-210ENST00000583800 C6orf48Q9UBA6 75 aa4.67□□□□□ -1.66
SMCHD1-210ENST00000583800 M0QXV9 152 aa4.66□□□□□ -1.66
SMCHD1-210ENST00000583800 RPL39P62891 51 aaKnown RBP4.66□□□□□ -1.66
SMCHD1-210ENST00000583800 UBE2BP63146 152 aa4.66□□□□□ -1.66
SMCHD1-210ENST00000583800 UNQ6190/PRO20217Q6UXQ8 127 aa4.66□□□□□ -1.66
SMCHD1-210ENST00000583800 LINC01551Q86U37 167 aa4.66□□□□□ -1.66
SMCHD1-210ENST00000583800 FAM104AQ969W3 186 aa4.66□□□□□ -1.66
SMCHD1-210ENST00000583800 IMMP2LQ96T52 175 aa4.66□□□□□ -1.66
SMCHD1-210ENST00000583800 TIMM21Q9BVV7 248 aa4.66□□□□□ -1.66
SMCHD1-210ENST00000583800 IGHV3OR16-9A0A0B4J2B5 98 aa4.65□□□□□ -1.67
SMCHD1-210ENST00000583800 PPP1R2P9O14990 202 aa4.65□□□□□ -1.67
SMCHD1-210ENST00000583800 PPP1R17O96001 155 aa4.65□□□□□ -1.67
SMCHD1-210ENST00000583800 TLX1NBP0CAT3 122 aa4.65□□□□□ -1.67
SMCHD1-210ENST00000583800 MRPL51Q4U2R6 128 aaKnown RBP4.65□□□□□ -1.67
SMCHD1-210ENST00000583800 SMIM7Q9BQ49 75 aa4.65□□□□□ -1.67
SMCHD1-210ENST00000583800 SMDT1Q9H4I9 107 aa4.65□□□□□ -1.67
SMCHD1-210ENST00000583800 OSTCQ9NRP0 149 aa4.65□□□□□ -1.67
SMCHD1-210ENST00000583800 A0A1B0GWB2 263 aa4.64□□□□□ -1.67
SMCHD1-210ENST00000583800 IFITM10A6NMD0 228 aa4.64□□□□□ -1.67
SMCHD1-210ENST00000583800 ALKAL2Q6UX46 152 aa4.64□□□□□ -1.67
SMCHD1-210ENST00000583800 TCTE3Q8IZS6 198 aa4.64□□□□□ -1.67
SMCHD1-210ENST00000583800 V9GYV3 84 aa4.64□□□□□ -1.67
SMCHD1-210ENST00000583800 A0A0U1RQV1 116 aa4.63□□□□□ -1.67
SMCHD1-210ENST00000583800 ZNF727A8MUV8 499 aa4.63□□□□□ -1.67
SMCHD1-210ENST00000583800 HBBP68871 147 aa4.63□□□□□ -1.67
SMCHD1-210ENST00000583800 CTAG1AP78358 180 aa4.63□□□□□ -1.67
SMCHD1-210ENST00000583800 KIAA0087Q14695 138 aa4.63□□□□□ -1.67
SMCHD1-210ENST00000583800 TMEM241Q24JQ0 296 aa4.63□□□□□ -1.67
SMCHD1-210ENST00000583800 C9orf129Q5T035 196 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-210ENST00000583800 FAM104BQ5XKR9 115 aa4.63□□□□□ -1.67
SMCHD1-210ENST00000583800 SMIM2Q9BVW6 85 aa4.63□□□□□ -1.67
SMCHD1-210ENST00000583800 SPANXA1Q9NS26 97 aa4.63□□□□□ -1.67
SMCHD1-210ENST00000583800 TGIF2-C20orf24A0A0A6YYL0 155 aa4.62□□□□□ -1.67
SMCHD1-210ENST00000583800 E9PLD3 99 aa4.62□□□□□ -1.67
SMCHD1-210ENST00000583800 TCAPO15273 167 aa4.62□□□□□ -1.67
SMCHD1-210ENST00000583800 CKS2P33552 79 aa4.62□□□□□ -1.67
SMCHD1-210ENST00000583800 LINC01547P58512 204 aaPredicted RBP4.62□□□□□ -1.67
SMCHD1-210ENST00000583800 MRPS36P82909 103 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-210ENST00000583800 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.62□□□□□ -1.67
SMCHD1-210ENST00000583800 C2orf82Q6UX34 121 aa4.62□□□□□ -1.67
SMCHD1-210ENST00000583800 C20orf78Q9BR46 151 aa4.62□□□□□ -1.67
SMCHD1-210ENST00000583800 MAP1LC3CQ9BXW4 147 aa4.62□□□□□ -1.67
SMCHD1-210ENST00000583800 EIF5A2Q9GZV4 153 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-210ENST00000583800 NAT8BQ9UHF3 227 aa4.62□□□□□ -1.67
SMCHD1-210ENST00000583800 TRBV24-1A0A075B6N3 115 aa4.61□□□□□ -1.67
SMCHD1-210ENST00000583800 TRBV30A0A0K0K1B3 111 aa4.61□□□□□ -1.67
SMCHD1-210ENST00000583800 LINC00862A6NCI5 91 aa4.61□□□□□ -1.67
SMCHD1-210ENST00000583800 D6R8Y8 96 aa4.61□□□□□ -1.67
SMCHD1-210ENST00000583800 NDUFC2-KCTD14E9PQ53 114 aa4.61□□□□□ -1.67
SMCHD1-210ENST00000583800 HSBP1O75506 76 aa4.61□□□□□ -1.67
SMCHD1-210ENST00000583800 NPYP01303 97 aa4.61□□□□□ -1.67
SMCHD1-210ENST00000583800 SRP19P09132 144 aaKnown RBP4.61□□□□□ -1.67
SMCHD1-210ENST00000583800 NDUFV3P56181 108 aaKnown RBP4.61□□□□□ -1.67
SMCHD1-210ENST00000583800 RPL32P62910 135 aaKnown RBP4.61□□□□□ -1.67
SMCHD1-210ENST00000583800 CARHSP1Q9Y2V2 147 aaKnown RBP4.61□□□□□ -1.67
SMCHD1-210ENST00000583800 MUC17Q685J3 4493 aa4.61□□□□□ -1.67
SMCHD1-210ENST00000583800 ZNF861PO60384 105 aa4.6□□□□□ -1.67
SMCHD1-210ENST00000583800 RPL23P62829 140 aaKnown RBP4.6□□□□□ -1.67
SMCHD1-210ENST00000583800 SMIM29Q86T20 159 aa4.6□□□□□ -1.67
SMCHD1-210ENST00000583800 PACRGQ96M98 296 aaPredicted RBP4.6□□□□□ -1.67
SMCHD1-210ENST00000583800 PYGO1Q9Y3Y4 419 aa4.6□□□□□ -1.67
SMCHD1-210ENST00000583800 IGLV4-3A0A075B6K6 122 aa4.59□□□□□ -1.67
SMCHD1-210ENST00000583800 A0A087X002 238 aa4.59□□□□□ -1.67
SMCHD1-210ENST00000583800 SMIM27A0A1W2PRY6 76 aa4.59□□□□□ -1.67
SMCHD1-210ENST00000583800 IFI27P40305 119 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-210ENST00000583800 ADIRFQ15847 76 aa4.59□□□□□ -1.67
SMCHD1-210ENST00000583800 ADAMTSL4-AS1Q5T5F5 129 aa4.59□□□□□ -1.67
SMCHD1-210ENST00000583800 MRPL54Q6P161 138 aaKnown RBP4.59□□□□□ -1.67
SMCHD1-210ENST00000583800 A0A1B0GW15 77 aa4.58□□□□□ -1.68
SMCHD1-210ENST00000583800 NUPR1O60356 82 aa4.58□□□□□ -1.68
SMCHD1-210ENST00000583800 ZC2HC1BQ5TFG8 222 aa4.58□□□□□ -1.68
SMCHD1-210ENST00000583800 TOMM7Q9P0U1 55 aa4.58□□□□□ -1.68
SMCHD1-210ENST00000583800 C22orf24Q9Y442 160 aa4.58□□□□□ -1.68
SMCHD1-210ENST00000583800 A0A1B0GXF2 115 aa4.57□□□□□ -1.68
SMCHD1-210ENST00000583800 TEX43Q6ZNM6 134 aa4.57□□□□□ -1.68
SMCHD1-210ENST00000583800 TMEM141Q96I45 108 aa4.57□□□□□ -1.68
SMCHD1-210ENST00000583800 OCR1Q9BZK8 76 aa4.57□□□□□ -1.68
SMCHD1-210ENST00000583800 XAGE1AQ9HD64 81 aa4.57□□□□□ -1.68
SMCHD1-210ENST00000583800 C9JQL5 133 aa4.56□□□□□ -1.68
SMCHD1-210ENST00000583800 F8W036 122 aa4.56□□□□□ -1.68
SMCHD1-210ENST00000583800 RAB5AP20339 215 aa4.56□□□□□ -1.68
SMCHD1-210ENST00000583800 LINC00173Q6ZV60 143 aa4.56□□□□□ -1.68
SMCHD1-210ENST00000583800 AKAP14Q86UN6 197 aa4.56□□□□□ -1.68
SMCHD1-210ENST00000583800 TYMSOSQ8TAI1 123 aa4.56□□□□□ -1.68
SMCHD1-210ENST00000583800 RETNLBQ9BQ08 111 aa4.56□□□□□ -1.68
SMCHD1-210ENST00000583800 NAT8Q9UHE5 227 aa4.56□□□□□ -1.68
SMCHD1-210ENST00000583800 PPBPP02775 128 aa4.55□□□□□ -1.68
SMCHD1-210ENST00000583800 S100A8P05109 93 aa4.55□□□□□ -1.68
SMCHD1-210ENST00000583800 CRYGAP11844 174 aa4.55□□□□□ -1.68
SMCHD1-210ENST00000583800 RPL28P46779 137 aaKnown RBP4.55□□□□□ -1.68
SMCHD1-210ENST00000583800 CKS1BP61024 79 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms