RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 NRACQ8N912 160 aa6.23□□□□□ -1.41
CASC3-208ENST00000583649 ZNF706Q9Y5V0 76 aaPredicted RBP6.23□□□□□ -1.41
CASC3-208ENST00000583649 RAB5AP20339 215 aa6.22□□□□□ -1.41
CASC3-208ENST00000583649 XP32Q5T750 250 aa6.22□□□□□ -1.41
CASC3-208ENST00000583649 CBLN2Q8IUK8 224 aa6.22□□□□□ -1.41
CASC3-208ENST00000583649 TMEM141Q96I45 108 aa6.22□□□□□ -1.41
CASC3-208ENST00000583649 A6NJY4 79 aa6.21□□□□□ -1.42
CASC3-208ENST00000583649 CKS2P33552 79 aa6.21□□□□□ -1.42
CASC3-208ENST00000583649 PRLHP81277 87 aa6.21□□□□□ -1.42
CASC3-208ENST00000583649 PLEKHB2Q96CS7 222 aa6.21□□□□□ -1.42
CASC3-208ENST00000583649 PYGO1Q9Y3Y4 419 aa6.21□□□□□ -1.42
CASC3-208ENST00000583649 IGLV5-37A0A075B6J1 123 aa6.2□□□□□ -1.42
CASC3-208ENST00000583649 TRBV24-1A0A075B6N3 115 aa6.2□□□□□ -1.42
CASC3-208ENST00000583649 IGKV2-28A0A075B6P5 120 aa6.2□□□□□ -1.42
CASC3-208ENST00000583649 IGKV2D-28P01615 120 aa6.2□□□□□ -1.42
CASC3-208ENST00000583649 SEC11AP67812 179 aa6.2□□□□□ -1.42
CASC3-208ENST00000583649 Q8NBF4 154 aa6.2□□□□□ -1.42
CASC3-208ENST00000583649 SMIM2Q9BVW6 85 aa6.19□□□□□ -1.42
CASC3-208ENST00000583649 IGLV8-61A0A075B6I0 122 aa6.18□□□□□ -1.42
CASC3-208ENST00000583649 SLC25A20O43772 301 aa6.18□□□□□ -1.42
CASC3-208ENST00000583649 FAM104AQ969W3 186 aa6.18□□□□□ -1.42
CASC3-208ENST00000583649 HIGD2AQ9BW72 106 aa6.18□□□□□ -1.42
CASC3-208ENST00000583649 EIF5A2Q9GZV4 153 aaKnown RBP6.18□□□□□ -1.42
CASC3-208ENST00000583649 VCX2Q9H322 139 aa6.18□□□□□ -1.42
CASC3-208ENST00000583649 IGLV4-3A0A075B6K6 122 aa6.17□□□□□ -1.42
CASC3-208ENST00000583649 RPS29P62273 56 aaKnown RBP6.17□□□□□ -1.42
CASC3-208ENST00000583649 HERVK_113P63121 156 aa6.17□□□□□ -1.42
CASC3-208ENST00000583649 MRPL51Q4U2R6 128 aaKnown RBP6.17□□□□□ -1.42
CASC3-208ENST00000583649 FAM104BQ5XKR9 115 aa6.17□□□□□ -1.42
CASC3-208ENST00000583649 COX6B2Q6YFQ2 88 aa6.17□□□□□ -1.42
CASC3-208ENST00000583649 TMEM126AQ9H061 195 aa6.17□□□□□ -1.42
CASC3-208ENST00000583649 GEMIN7Q9H840 131 aaKnown RBP6.17□□□□□ -1.42
CASC3-208ENST00000583649 LINC01551Q86U37 167 aa6.16□□□□□ -1.42
CASC3-208ENST00000583649 A0A1B0GW15 77 aa6.15□□□□□ -1.42
CASC3-208ENST00000583649 HMSDA8MTL9 139 aa6.15□□□□□ -1.42
CASC3-208ENST00000583649 F8W036 122 aa6.15□□□□□ -1.42
CASC3-208ENST00000583649 TMEM250H0YL14 139 aa6.15□□□□□ -1.42
CASC3-208ENST00000583649 RPL24P83731 157 aaKnown RBP6.15□□□□□ -1.42
CASC3-208ENST00000583649 KRTAP19-2Q3LHN2 52 aa6.15□□□□□ -1.42
CASC3-208ENST00000583649 PAPPA-AS1Q5QFB9 102 aa6.15□□□□□ -1.42
CASC3-208ENST00000583649 SPRR4Q96PI1 79 aa6.15□□□□□ -1.42
CASC3-208ENST00000583649 NAT8BQ9UHF3 227 aa6.15□□□□□ -1.42
CASC3-208ENST00000583649 PPBPP02775 128 aa6.14□□□□□ -1.43
CASC3-208ENST00000583649 S100A8P05109 93 aa6.14□□□□□ -1.43
CASC3-208ENST00000583649 NPSP0C0P6 89 aa6.13□□□□□ -1.43
CASC3-208ENST00000583649 CEBPGP53567 150 aa6.13□□□□□ -1.43
CASC3-208ENST00000583649 PCOTHQ58A44 107 aa6.13□□□□□ -1.43
CASC3-208ENST00000583649 OSTCQ9NRP0 149 aa6.13□□□□□ -1.43
CASC3-208ENST00000583649 TMEM238C9JI98 176 aa6.12□□□□□ -1.43
CASC3-208ENST00000583649 RAB5BP61020 215 aa6.12□□□□□ -1.43
CASC3-208ENST00000583649 Q8N377 158 aa6.12□□□□□ -1.43
CASC3-208ENST00000583649 CYSLTR1Q9Y271 337 aa6.12□□□□□ -1.43
CASC3-208ENST00000583649 D6R8Y8 96 aa6.11□□□□□ -1.43
CASC3-208ENST00000583649 SMLR1H3BR10 107 aa6.1□□□□□ -1.43
CASC3-208ENST00000583649 M0R378 163 aa6.1□□□□□ -1.43
CASC3-208ENST00000583649 ATP5LO75964 103 aa6.1□□□□□ -1.43
CASC3-208ENST00000583649 G0S2P27469 103 aa6.1□□□□□ -1.43
CASC3-208ENST00000583649 C2orf66Q6UXQ4 117 aa6.1□□□□□ -1.43
CASC3-208ENST00000583649 FAM19A3Q7Z5A8 133 aa6.1□□□□□ -1.43
CASC3-208ENST00000583649 AKAP14Q86UN6 197 aa6.1□□□□□ -1.43
CASC3-208ENST00000583649 COX7B2Q8TF08 81 aa6.1□□□□□ -1.43
CASC3-208ENST00000583649 AMELXQ99217 191 aa6.1□□□□□ -1.43
CASC3-208ENST00000583649 CDKN2A-AS1Q9UH64 79 aa6.1□□□□□ -1.43
CASC3-208ENST00000583649 CFC1P0CG37 223 aa6.09□□□□□ -1.43
CASC3-208ENST00000583649 PDZD11Q5EBL8 140 aa6.09□□□□□ -1.43
CASC3-208ENST00000583649 SSBP3-AS1Q7Z2R9 100 aa6.09□□□□□ -1.43
CASC3-208ENST00000583649 ORMDL3Q8N138 153 aa6.09□□□□□ -1.43
CASC3-208ENST00000583649 SMIM7Q9BQ49 75 aa6.09□□□□□ -1.43
CASC3-208ENST00000583649 SCO1O75880 301 aa6.08□□□□□ -1.44
CASC3-208ENST00000583649 NPYP01303 97 aa6.08□□□□□ -1.44
CASC3-208ENST00000583649 FAM74A3Q4VXF1 159 aa6.07□□□□□ -1.44
CASC3-208ENST00000583649 ORMDL2Q53FV1 153 aa6.07□□□□□ -1.44
CASC3-208ENST00000583649 MAP1LC3AQ9H492 121 aa6.06□□□□□ -1.44
CASC3-208ENST00000583649 V9GYV3 84 aa6.06□□□□□ -1.44
CASC3-208ENST00000583649 IGLV9-49A0A0B4J1Y8 123 aa6.05□□□□□ -1.44
CASC3-208ENST00000583649 K7EMI3 77 aa6.05□□□□□ -1.44
CASC3-208ENST00000583649 VPREB1P12018 145 aa6.05□□□□□ -1.44
CASC3-208ENST00000583649 PFN2P35080 140 aa6.05□□□□□ -1.44
CASC3-208ENST00000583649 RAB14P61106 215 aa6.05□□□□□ -1.44
CASC3-208ENST00000583649 MOBPQ13875 183 aa6.05□□□□□ -1.44
CASC3-208ENST00000583649 TMEM136Q6ZRR5 245 aa6.05□□□□□ -1.44
CASC3-208ENST00000583649 PRELID3AQ96N28 172 aa6.05□□□□□ -1.44
CASC3-208ENST00000583649 LAMTOR2Q9Y2Q5 125 aa6.05□□□□□ -1.44
CASC3-208ENST00000583649 LOC389332A0A1B0GUA5 103 aa6.04□□□□□ -1.44
CASC3-208ENST00000583649 SMIM1B2RUZ4 78 aa6.04□□□□□ -1.44
CASC3-208ENST00000583649 S100A12P80511 92 aa6.04□□□□□ -1.44
CASC3-208ENST00000583649 COX17Q14061 63 aa6.04□□□□□ -1.44
CASC3-208ENST00000583649 ZC2HC1BQ5TFG8 222 aa6.04□□□□□ -1.44
CASC3-208ENST00000583649 TMA7Q9Y2S6 64 aaKnown RBP6.04□□□□□ -1.44
CASC3-208ENST00000583649 LINC00483Q53H64 154 aa6.03□□□□□ -1.44
CASC3-208ENST00000583649 SND1-IT1Q9HBX3 110 aa6.03□□□□□ -1.44
CASC3-208ENST00000583649 SMIM27A0A1W2PRY6 76 aa6.02□□□□□ -1.45
CASC3-208ENST00000583649 IGIPA6NJ69 53 aa6.02□□□□□ -1.45
CASC3-208ENST00000583649 H3BRM9 83 aa6.02□□□□□ -1.45
CASC3-208ENST00000583649 BLOC1S1P78537 153 aa6.02□□□□□ -1.45
CASC3-208ENST00000583649 GAGE2AQ6NT46 116 aa6.02□□□□□ -1.45
CASC3-208ENST00000583649 SMCR5Q8TEV8 140 aa6.02□□□□□ -1.45
CASC3-208ENST00000583649 ETDCA0A1B0GVM5 59 aa6.01□□□□□ -1.45
CASC3-208ENST00000583649 TINCRA0A1B0GVN0 87 aa6.01□□□□□ -1.45
CASC3-208ENST00000583649 PRSS47A8MTI9 375 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms