RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 CENPWQ5EE01 88 aa3.36□□□□□ -1.87
NUP85-221ENST00000583548 Q6Q795 121 aa3.36□□□□□ -1.87
NUP85-221ENST00000583548 Q6ZN92 141 aa3.36□□□□□ -1.87
NUP85-221ENST00000583548 TOMM7Q9P0U1 55 aa3.36□□□□□ -1.87
NUP85-221ENST00000583548 C9orf92A6NGG3 77 aa3.35□□□□□ -1.87
NUP85-221ENST00000583548 SSNA1O43805 119 aa3.35□□□□□ -1.87
NUP85-221ENST00000583548 SUMO2P61956 95 aaKnown RBP3.35□□□□□ -1.87
NUP85-221ENST00000583548 BORCS7Q96B45 105 aa3.35□□□□□ -1.87
NUP85-221ENST00000583548 ALKBH7Q9BT30 221 aaPredicted RBP3.35□□□□□ -1.87
NUP85-221ENST00000583548 TRBV20OR9-2A0A075B6H5 130 aa3.34□□□□□ -1.87
NUP85-221ENST00000583548 M0R378 163 aa3.34□□□□□ -1.87
NUP85-221ENST00000583548 IGLV6-57P01721 117 aa3.34□□□□□ -1.87
NUP85-221ENST00000583548 CCL20P78556 96 aa3.34□□□□□ -1.87
NUP85-221ENST00000583548 RPL7L1Q6DKI1 246 aaKnown RBP3.34□□□□□ -1.87
NUP85-221ENST00000583548 KCNRGQ8N5I3 272 aa3.34□□□□□ -1.87
NUP85-221ENST00000583548 ENKURQ8TC29 256 aa3.34□□□□□ -1.87
NUP85-221ENST00000583548 C11orf52Q96A22 123 aa3.34□□□□□ -1.87
NUP85-221ENST00000583548 TMEM238C9JI98 176 aa3.33□□□□□ -1.88
NUP85-221ENST00000583548 MT2AP02795 61 aa3.33□□□□□ -1.88
NUP85-221ENST00000583548 IFI27P40305 119 aaPredicted RBP3.33□□□□□ -1.88
NUP85-221ENST00000583548 RPL37P61927 97 aaKnown RBP3.33□□□□□ -1.88
NUP85-221ENST00000583548 MOBPQ13875 183 aa3.33□□□□□ -1.88
NUP85-221ENST00000583548 FAM231DQ6ZW35 169 aa3.33□□□□□ -1.88
NUP85-221ENST00000583548 NRACQ8N912 160 aa3.33□□□□□ -1.88
NUP85-221ENST00000583548 NUDT10Q8NFP7 164 aa3.33□□□□□ -1.88
NUP85-221ENST00000583548 SFT2D1Q8WV19 159 aa3.33□□□□□ -1.88
NUP85-221ENST00000583548 NUDT11Q96G61 164 aa3.33□□□□□ -1.88
NUP85-221ENST00000583548 LIMD2Q9BT23 127 aa3.33□□□□□ -1.88
NUP85-221ENST00000583548 KRTAP9-3Q9BYQ3 159 aa3.33□□□□□ -1.88
NUP85-221ENST00000583548 TMEM191AQ9H0A3 160 aa3.33□□□□□ -1.88
NUP85-221ENST00000583548 RAB4AP20338 218 aa3.32□□□□□ -1.88
NUP85-221ENST00000583548 RPL39P62891 51 aaKnown RBP3.32□□□□□ -1.88
NUP85-221ENST00000583548 LINC00483Q53H64 154 aa3.32□□□□□ -1.88
NUP85-221ENST00000583548 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
NUP85-221ENST00000583548 FAM104AQ969W3 186 aa3.32□□□□□ -1.88
NUP85-221ENST00000583548 MANBALQ9NQG1 85 aa3.32□□□□□ -1.88
NUP85-221ENST00000583548 IGLV9-49A0A0B4J1Y8 123 aa3.31□□□□□ -1.88
NUP85-221ENST00000583548 A8MWL6 223 aa3.31□□□□□ -1.88
NUP85-221ENST00000583548 KRTAP10-10P60014 251 aa3.31□□□□□ -1.88
NUP85-221ENST00000583548 RPL24P83731 157 aaKnown RBP3.31□□□□□ -1.88
NUP85-221ENST00000583548 TEX43Q6ZNM6 134 aa3.31□□□□□ -1.88
NUP85-221ENST00000583548 AKAP14Q86UN6 197 aa3.31□□□□□ -1.88
NUP85-221ENST00000583548 MBD3L1Q8WWY6 194 aa3.31□□□□□ -1.88
NUP85-221ENST00000583548 C20orf78Q9BR46 151 aa3.31□□□□□ -1.88
NUP85-221ENST00000583548 C2orf88Q9BSF0 95 aa3.31□□□□□ -1.88
NUP85-221ENST00000583548 C20orf202A1L168 122 aa3.3□□□□□ -1.88
NUP85-221ENST00000583548 UMAD1C9J7I0 102 aa3.3□□□□□ -1.88
NUP85-221ENST00000583548 NPSP0C0P6 89 aa3.3□□□□□ -1.88
NUP85-221ENST00000583548 SEC11AP67812 179 aa3.3□□□□□ -1.88
NUP85-221ENST00000583548 FAM19A3Q7Z5A8 133 aa3.3□□□□□ -1.88
NUP85-221ENST00000583548 TMEM141Q96I45 108 aa3.3□□□□□ -1.88
NUP85-221ENST00000583548 PYGO1Q9Y3Y4 419 aa3.3□□□□□ -1.88
NUP85-221ENST00000583548 A0A1B0GUT8 65 aa3.29□□□□□ -1.88
NUP85-221ENST00000583548 A0A1B0GV50 99 aa3.29□□□□□ -1.88
NUP85-221ENST00000583548 PDE6DO43924 150 aa3.29□□□□□ -1.88
NUP85-221ENST00000583548 SCO1O75880 301 aa3.29□□□□□ -1.88
NUP85-221ENST00000583548 MT1FP04733 61 aa3.29□□□□□ -1.88
NUP85-221ENST00000583548 AMN1Q8IY45 258 aa3.29□□□□□ -1.88
NUP85-221ENST00000583548 FAM213BQ8TBF2 198 aa3.29□□□□□ -1.88
NUP85-221ENST00000583548 IGLV4-3A0A075B6K6 122 aa3.28□□□□□ -1.88
NUP85-221ENST00000583548 LINC00862A6NCI5 91 aa3.28□□□□□ -1.88
NUP85-221ENST00000583548 VPREB1P12018 145 aa3.28□□□□□ -1.88
NUP85-221ENST00000583548 HERVK_113P63121 156 aa3.28□□□□□ -1.88
NUP85-221ENST00000583548 GAGE2AQ6NT46 116 aa3.28□□□□□ -1.88
NUP85-221ENST00000583548 SMCR5Q8TEV8 140 aa3.28□□□□□ -1.88
NUP85-221ENST00000583548 TIMM17AQ99595 171 aa3.28□□□□□ -1.88
NUP85-221ENST00000583548 EIF5A2Q9GZV4 153 aaKnown RBP3.28□□□□□ -1.88
NUP85-221ENST00000583548 TRBV24-1A0A075B6N3 115 aa3.27□□□□□ -1.89
NUP85-221ENST00000583548 SMKR1H3BMG3 65 aa3.27□□□□□ -1.89
NUP85-221ENST00000583548 GATCO43716 136 aaKnown RBP3.27□□□□□ -1.89
NUP85-221ENST00000583548 KRTAP2-3P0C7H8 128 aa3.27□□□□□ -1.89
NUP85-221ENST00000583548 LGALS3P17931 250 aaKnown RBP3.27□□□□□ -1.89
NUP85-221ENST00000583548 RAB5BP61020 215 aa3.27□□□□□ -1.89
NUP85-221ENST00000583548 CT83Q5H943 113 aa3.27□□□□□ -1.89
NUP85-221ENST00000583548 SMIM2Q9BVW6 85 aa3.27□□□□□ -1.89
NUP85-221ENST00000583548 KRTAP2-4Q9BYR9 128 aa3.27□□□□□ -1.89
NUP85-221ENST00000583548 MED9Q9NWA0 146 aa3.27□□□□□ -1.89
NUP85-221ENST00000583548 GNG13Q9P2W3 67 aa3.27□□□□□ -1.89
NUP85-221ENST00000583548 TEX46H3BTG2 121 aa3.26□□□□□ -1.89
NUP85-221ENST00000583548 RAB5AP20339 215 aa3.26□□□□□ -1.89
NUP85-221ENST00000583548 C9orf153Q5TBE3 101 aa3.26□□□□□ -1.89
NUP85-221ENST00000583548 TRBV20-1A0A075B6N2 111 aa3.25□□□□□ -1.89
NUP85-221ENST00000583548 FXYD6-FXYD2A0A087WZ82 144 aa3.25□□□□□ -1.89
NUP85-221ENST00000583548 HIGD1CA8MV81 97 aa3.25□□□□□ -1.89
NUP85-221ENST00000583548 PRYO14603 147 aa3.25□□□□□ -1.89
NUP85-221ENST00000583548 ATP5LO75964 103 aa3.25□□□□□ -1.89
NUP85-221ENST00000583548 RIGQ13278 110 aa3.25□□□□□ -1.89
NUP85-221ENST00000583548 PDZD11Q5EBL8 140 aa3.25□□□□□ -1.89
NUP85-221ENST00000583548 COX7B2Q8TF08 81 aa3.25□□□□□ -1.89
NUP85-221ENST00000583548 VCX2Q9H322 139 aa3.25□□□□□ -1.89
NUP85-221ENST00000583548 CDKN2A-AS1Q9UH64 79 aa3.25□□□□□ -1.89
NUP85-221ENST00000583548 ETDCA0A1B0GVM5 59 aa3.24□□□□□ -1.89
NUP85-221ENST00000583548 K7EN84 100 aa3.24□□□□□ -1.89
NUP85-221ENST00000583548 CKS2P33552 79 aa3.24□□□□□ -1.89
NUP85-221ENST00000583548 C6orf99Q4VX62 202 aa3.24□□□□□ -1.89
NUP85-221ENST00000583548 PAPPA-AS1Q5QFB9 102 aa3.24□□□□□ -1.89
NUP85-221ENST00000583548 C2orf66Q6UXQ4 117 aa3.24□□□□□ -1.89
NUP85-221ENST00000583548 OCC1Q8TAD7 63 aa3.24□□□□□ -1.89
NUP85-221ENST00000583548 AMELXQ99217 191 aa3.24□□□□□ -1.89
NUP85-221ENST00000583548 MRPL18Q9H0U6 180 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms