RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 NDUFA6P56556 154 aa15.72■□□□□ 0.11
TSEN54-209ENST00000583454 LINC00474Q9P2X8 69 aa15.72■□□□□ 0.11
TSEN54-209ENST00000583454 OXTP01178 125 aa15.71■□□□□ 0.11
TSEN54-209ENST00000583454 IGLC3P0DOY3 106 aa15.71■□□□□ 0.11
TSEN54-209ENST00000583454 HNRNPA3P51991 378 aaKnown RBP15.71■□□□□ 0.11
TSEN54-209ENST00000583454 MAJINQ3KP22 176 aa15.71■□□□□ 0.11
TSEN54-209ENST00000583454 Q8IZM0 81 aa15.71■□□□□ 0.11
TSEN54-209ENST00000583454 FAM19A2Q8N3H0 131 aa15.71■□□□□ 0.11
TSEN54-209ENST00000583454 PACRGQ96M98 296 aaPredicted RBP15.71■□□□□ 0.11
TSEN54-209ENST00000583454 UBR4Q5T4S7 5183 aa15.7■□□□□ 0.1
TSEN54-209ENST00000583454 SERF1AO75920 110 aa15.7■□□□□ 0.1
TSEN54-209ENST00000583454 C6orf48Q9UBA6 75 aa15.7■□□□□ 0.1
TSEN54-209ENST00000583454 SMIM1B2RUZ4 78 aa15.69■□□□□ 0.1
TSEN54-209ENST00000583454 PTTG1IPP53801 180 aa15.69■□□□□ 0.1
TSEN54-209ENST00000583454 C2orf82Q6UX34 121 aa15.69■□□□□ 0.1
TSEN54-209ENST00000583454 PRSS2P07478 247 aa15.68■□□□□ 0.1
TSEN54-209ENST00000583454 C6orf226Q5I0X4 101 aa15.68■□□□□ 0.1
TSEN54-209ENST00000583454 IFI27L1Q96BM0 104 aa15.68■□□□□ 0.1
TSEN54-209ENST00000583454 TOMM7Q9P0U1 55 aa15.68■□□□□ 0.1
TSEN54-209ENST00000583454 TRBV30A0A0K0K1B3 111 aa15.67■□□□□ 0.1
TSEN54-209ENST00000583454 RPL37AP61513 92 aaKnown RBP15.67■□□□□ 0.1
TSEN54-209ENST00000583454 NUPR1O60356 82 aa15.66■□□□□ 0.1
TSEN54-209ENST00000583454 TLX1NBP0CAT3 122 aa15.66■□□□□ 0.1
TSEN54-209ENST00000583454 GAGE2BQ13066 116 aa15.66■□□□□ 0.1
TSEN54-209ENST00000583454 STPG4Q8N801 248 aa15.66■□□□□ 0.1
TSEN54-209ENST00000583454 TRAV12-1A0A0B4J245 112 aa15.65■□□□□ 0.1
TSEN54-209ENST00000583454 H3BRM9 83 aa15.64■□□□□ 0.09
TSEN54-209ENST00000583454 SPINK8P0C7L1 97 aa15.64■□□□□ 0.09
TSEN54-209ENST00000583454 CKS1BP61024 79 aa15.64■□□□□ 0.09
TSEN54-209ENST00000583454 SERTAD4-AS1Q5TG53 156 aa15.64■□□□□ 0.09
TSEN54-209ENST00000583454 HIST1H2BKO60814 126 aa15.63■□□□□ 0.09
TSEN54-209ENST00000583454 HIST1H2BJP06899 126 aa15.63■□□□□ 0.09
TSEN54-209ENST00000583454 ZNF22P17026 224 aaPredicted RBP15.63■□□□□ 0.09
TSEN54-209ENST00000583454 S100A1P23297 94 aa15.63■□□□□ 0.09
TSEN54-209ENST00000583454 HIST1H2BOP23527 126 aa15.63■□□□□ 0.09
TSEN54-209ENST00000583454 HIST1H2BBP33778 126 aa15.63■□□□□ 0.09
TSEN54-209ENST00000583454 HIST1H2BDP58876 126 aa15.63■□□□□ 0.09
TSEN54-209ENST00000583454 HIST1H2BCP62807 126 aa15.63■□□□□ 0.09
TSEN54-209ENST00000583454 HIST2H2BEQ16778 126 aa15.63■□□□□ 0.09
TSEN54-209ENST00000583454 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.63■□□□□ 0.09
TSEN54-209ENST00000583454 HIST1H2BHQ93079 126 aa15.63■□□□□ 0.09
TSEN54-209ENST00000583454 HIST1H2BNQ99877 126 aa15.63■□□□□ 0.09
TSEN54-209ENST00000583454 HIST1H2BMQ99879 126 aa15.63■□□□□ 0.09
TSEN54-209ENST00000583454 C11orf86A6NJI1 115 aa15.62■□□□□ 0.09
TSEN54-209ENST00000583454 RPL18AQ02543 176 aaKnown RBP15.62■□□□□ 0.09
TSEN54-209ENST00000583454 COX7B2Q8TF08 81 aa15.62■□□□□ 0.09
TSEN54-209ENST00000583454 CHTOPQ9Y3Y2 248 aaKnown RBP15.62■□□□□ 0.09
TSEN54-209ENST00000583454 IGLV5-39A0A0G2JS06 123 aa15.6■□□□□ 0.09
TSEN54-209ENST00000583454 LEPROTL1O95214 131 aa15.6■□□□□ 0.09
TSEN54-209ENST00000583454 CXCL5P42830 114 aa15.6■□□□□ 0.09
TSEN54-209ENST00000583454 Q6ZRP5 223 aa15.6■□□□□ 0.09
TSEN54-209ENST00000583454 F8VRH5 84 aa15.59■□□□□ 0.09
TSEN54-209ENST00000583454 C9orf116Q5BN46 136 aaPredicted RBP15.59■□□□□ 0.09
TSEN54-209ENST00000583454 NDUFC2-KCTD14E9PQ53 114 aa15.58■□□□□ 0.08
TSEN54-209ENST00000583454 ATP6V1G1O75348 118 aa15.58■□□□□ 0.08
TSEN54-209ENST00000583454 A0A1W2PNN7 141 aa15.56■□□□□ 0.08
TSEN54-209ENST00000583454 HSPB8Q9UJY1 196 aa15.56■□□□□ 0.08
TSEN54-209ENST00000583454 TMEM170BQ5T4T1 132 aa15.55■□□□□ 0.08
TSEN54-209ENST00000583454 TNXBP22105 4242 aa15.54■□□□□ 0.08
TSEN54-209ENST00000583454 MT1HL1P0DM35 61 aa15.53■□□□□ 0.08
TSEN54-209ENST00000583454 FABP4P15090 132 aa15.53■□□□□ 0.08
TSEN54-209ENST00000583454 ODF1Q14990 250 aa15.53■□□□□ 0.08
TSEN54-209ENST00000583454 GAGE2EQ4V326 116 aa15.53■□□□□ 0.08
TSEN54-209ENST00000583454 GAGE2DQ9UEU5 116 aa15.53■□□□□ 0.08
TSEN54-209ENST00000583454 C7orf33Q8WU49 177 aa15.52■□□□□ 0.08
TSEN54-209ENST00000583454 COA6Q5JTJ3 125 aaKnown RBP15.5■□□□□ 0.07
TSEN54-209ENST00000583454 TMEM223A0PJW6 202 aa15.49■□□□□ 0.07
TSEN54-209ENST00000583454 PLA2G2DQ9UNK4 145 aa15.49■□□□□ 0.07
TSEN54-209ENST00000583454 H0Y8G0 127 aa15.48■□□□□ 0.07
TSEN54-209ENST00000583454 C9orf129Q5T035 196 aaKnown RBP15.48■□□□□ 0.07
TSEN54-209ENST00000583454 FAM168BA1KXE4 195 aa15.47■□□□□ 0.07
TSEN54-209ENST00000583454 KRTAP7-1Q8IUC3 87 aa15.45■□□□□ 0.06
TSEN54-209ENST00000583454 MAP1LC3CQ9BXW4 147 aa15.44■□□□□ 0.06
TSEN54-209ENST00000583454 PLNP26678 52 aa15.42■□□□□ 0.06
TSEN54-209ENST00000583454 SFTA2Q6UW10 78 aa15.42■□□□□ 0.06
TSEN54-209ENST00000583454 PHF5AQ7RTV0 110 aaKnown RBP15.41■□□□□ 0.06
TSEN54-209ENST00000583454 FAM19A5Q7Z5A7 132 aaPredicted RBP15.41■□□□□ 0.06
TSEN54-209ENST00000583454 ZNF625Q96I27 306 aaPredicted RBP15.41■□□□□ 0.06
TSEN54-209ENST00000583454 XAGE1AQ9HD64 81 aa15.41■□□□□ 0.06
TSEN54-209ENST00000583454 DPM2O94777 84 aa15.4■□□□□ 0.06
TSEN54-209ENST00000583454 PRR3P79522 188 aaKnown RBP15.4■□□□□ 0.06
TSEN54-209ENST00000583454 PMCHL2Q9BQD1 86 aa15.39■□□□□ 0.05
TSEN54-209ENST00000583454 SYS1-DBNDD2H3BUS1 97 aa15.37■□□□□ 0.05
TSEN54-209ENST00000583454 ERG28Q9UKR5 140 aa15.37■□□□□ 0.05
TSEN54-209ENST00000583454 LRP2P98164 4655 aa15.36■□□□□ 0.05
TSEN54-209ENST00000583454 IGKCP01834 107 aa15.36■□□□□ 0.05
TSEN54-209ENST00000583454 COX17Q14061 63 aa15.36■□□□□ 0.05
TSEN54-209ENST00000583454 M0QXV9 152 aa15.35■□□□□ 0.05
TSEN54-209ENST00000583454 PFN2P35080 140 aa15.35■□□□□ 0.05
TSEN54-209ENST00000583454 PET117Q6UWS5 81 aa15.33■□□□□ 0.04
TSEN54-209ENST00000583454 PSORS1C2Q9UIG4 136 aa15.33■□□□□ 0.04
TSEN54-209ENST00000583454 LEPROTO15243 131 aa15.31■□□□□ 0.04
TSEN54-209ENST00000583454 LINC01545Q5VT33 79 aa15.31■□□□□ 0.04
TSEN54-209ENST00000583454 KRTAP11-1Q8IUC1 163 aa15.31■□□□□ 0.04
TSEN54-209ENST00000583454 C22orf24Q9Y442 160 aa15.31■□□□□ 0.04
TSEN54-209ENST00000583454 PLEKHB2Q96CS7 222 aa15.3■□□□□ 0.04
TSEN54-209ENST00000583454 C3orf79P0CE67 100 aa15.29■□□□□ 0.04
TSEN54-209ENST00000583454 HERVK_113P61574 105 aa15.29■□□□□ 0.04
TSEN54-209ENST00000583454 SND1-IT1Q9HBX3 110 aa15.29■□□□□ 0.04
TSEN54-209ENST00000583454 TP73-AS1Q9UF72 201 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms