RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 LINC00694P0DN24 101 aa11.71□□□□□ -0.53
ERBB2-214ENST00000583038 SPINK6Q6UWN8 80 aa11.71□□□□□ -0.53
ERBB2-214ENST00000583038 MPLKIPQ8TAP9 179 aa11.71□□□□□ -0.53
ERBB2-214ENST00000583038 TRBV10-3A0A0K0K1G6 114 aa11.71□□□□□ -0.53
ERBB2-214ENST00000583038 TSPEAR-AS2P59090 65 aa11.71□□□□□ -0.53
ERBB2-214ENST00000583038 COX6A2Q02221 97 aa11.69□□□□□ -0.54
ERBB2-214ENST00000583038 SPTSSBQ8NFR3 76 aa11.69□□□□□ -0.54
ERBB2-214ENST00000583038 C2orf48Q96LS8 159 aa11.69□□□□□ -0.54
ERBB2-214ENST00000583038 M0QXV9 152 aa11.69□□□□□ -0.54
ERBB2-214ENST00000583038 M0R2N4 97 aa11.69□□□□□ -0.54
ERBB2-214ENST00000583038 C10orf25Q5T742 122 aa11.69□□□□□ -0.54
ERBB2-214ENST00000583038 SVIPQ8NHG7 77 aa11.68□□□□□ -0.54
ERBB2-214ENST00000583038 C1orf137Q5JT78 98 aa11.67□□□□□ -0.54
ERBB2-214ENST00000583038 TRAV7A0A075B6U4 112 aa11.67□□□□□ -0.54
ERBB2-214ENST00000583038 CPAMD8Q8IZJ3 1885 aa11.67□□□□□ -0.54
ERBB2-214ENST00000583038 SNURFQ9Y675 71 aa11.66□□□□□ -0.54
ERBB2-214ENST00000583038 LY6G6CO95867 125 aa11.66□□□□□ -0.54
ERBB2-214ENST00000583038 ADAMTSL4-AS1Q5T5F5 129 aa11.66□□□□□ -0.54
ERBB2-214ENST00000583038 Q6ZTC4 211 aa11.66□□□□□ -0.54
ERBB2-214ENST00000583038 SMR3AQ99954 134 aa11.66□□□□□ -0.54
ERBB2-214ENST00000583038 C9orf116Q5BN46 136 aaPredicted RBP11.65□□□□□ -0.54
ERBB2-214ENST00000583038 REG3GQ6UW15 175 aa11.65□□□□□ -0.54
ERBB2-214ENST00000583038 RAI1Q7Z5J4 1906 aaPredicted RBP11.64□□□□□ -0.55
ERBB2-214ENST00000583038 C6orf223Q8N319 242 aa11.64□□□□□ -0.55
ERBB2-214ENST00000583038 KIF25-AS1Q9Y6Z4 181 aa11.64□□□□□ -0.55
ERBB2-214ENST00000583038 IGLV9-49A0A0B4J1Y8 123 aa11.64□□□□□ -0.55
ERBB2-214ENST00000583038 ZNF462Q96JM2 2506 aa11.64□□□□□ -0.55
ERBB2-214ENST00000583038 MTORP42345 2549 aa11.62□□□□□ -0.55
ERBB2-214ENST00000583038 Q8N2B8 174 aa11.62□□□□□ -0.55
ERBB2-214ENST00000583038 CCDC179H3BU77 68 aa11.61□□□□□ -0.55
ERBB2-214ENST00000583038 RETNQ9HD89 108 aa11.61□□□□□ -0.55
ERBB2-214ENST00000583038 Q6ZSN1 163 aa11.61□□□□□ -0.55
ERBB2-214ENST00000583038 PRYO14603 147 aa11.61□□□□□ -0.55
ERBB2-214ENST00000583038 A0A087WYN8 130 aa11.6□□□□□ -0.55
ERBB2-214ENST00000583038 SPTBN4Q9H254 2564 aa11.6□□□□□ -0.55
ERBB2-214ENST00000583038 SMIM26A0A096LP01 95 aa11.6□□□□□ -0.55
ERBB2-214ENST00000583038 LYPD5Q6UWN5 251 aa11.6□□□□□ -0.55
ERBB2-214ENST00000583038 SERP1Q9Y6X1 66 aa11.59□□□□□ -0.55
ERBB2-214ENST00000583038 HRCT1Q6UXD1 115 aa11.59□□□□□ -0.55
ERBB2-214ENST00000583038 LINC01546A6NGU7 62 aa11.58□□□□□ -0.56
ERBB2-214ENST00000583038 ADAMTS20P59510 1910 aa11.58□□□□□ -0.56
ERBB2-214ENST00000583038 PRR3P79522 188 aaKnown RBP11.57□□□□□ -0.56
ERBB2-214ENST00000583038 AGRNO00468 2067 aa11.57□□□□□ -0.56
ERBB2-214ENST00000583038 C11orf72Q8NBR9 251 aa11.56□□□□□ -0.56
ERBB2-214ENST00000583038 IGLV5-39A0A0G2JS06 123 aa11.56□□□□□ -0.56
ERBB2-214ENST00000583038 EXPH5Q8NEV8 1989 aa11.56□□□□□ -0.56
ERBB2-214ENST00000583038 FAM30AQ9NZY2 134 aa11.55□□□□□ -0.56
ERBB2-214ENST00000583038 LINC00575Q6W349 94 aa11.55□□□□□ -0.56
ERBB2-214ENST00000583038 A6NED7 52 aa11.54□□□□□ -0.56
ERBB2-214ENST00000583038 CELA1Q9UNI1 258 aa11.54□□□□□ -0.56
ERBB2-214ENST00000583038 PRR4Q16378 134 aa11.54□□□□□ -0.56
ERBB2-214ENST00000583038 Q8N3U1 123 aa11.54□□□□□ -0.56
ERBB2-214ENST00000583038 FASNP49327 2511 aaKnown RBP11.53□□□□□ -0.56
ERBB2-214ENST00000583038 LINC00208Q96KT6 92 aa11.53□□□□□ -0.56
ERBB2-214ENST00000583038 FAM19A4Q96LR4 140 aa11.52□□□□□ -0.56
ERBB2-214ENST00000583038 IGHV3OR16-9A0A0B4J2B5 98 aa11.52□□□□□ -0.57
ERBB2-214ENST00000583038 LINC00315P59091 139 aa11.51□□□□□ -0.57
ERBB2-214ENST00000583038 Q9BRP9 147 aa11.51□□□□□ -0.57
ERBB2-214ENST00000583038 IGLV5-52A0A0A0MRZ9 124 aa11.51□□□□□ -0.57
ERBB2-214ENST00000583038 A0A087WVE0 104 aa11.5□□□□□ -0.57
ERBB2-214ENST00000583038 LINC00337Q8N6G1 96 aa11.5□□□□□ -0.57
ERBB2-214ENST00000583038 ESRGQ1W209 222 aa11.49□□□□□ -0.57
ERBB2-214ENST00000583038 NHLRC4P0CG21 123 aaPredicted RBP11.49□□□□□ -0.57
ERBB2-214ENST00000583038 Q6ZRU5 148 aa11.49□□□□□ -0.57
ERBB2-214ENST00000583038 A0A087WSZ3 146 aa11.47□□□□□ -0.57
ERBB2-214ENST00000583038 LINC01547P58512 204 aaPredicted RBP11.47□□□□□ -0.57
ERBB2-214ENST00000583038 Q6ZVQ6 151 aa11.47□□□□□ -0.57
ERBB2-214ENST00000583038 A0A0U1RQV1 116 aa11.46□□□□□ -0.57
ERBB2-214ENST00000583038 FHL3Q13643 280 aa11.46□□□□□ -0.57
ERBB2-214ENST00000583038 LINC01556Q5JQF7 62 aa11.46□□□□□ -0.58
ERBB2-214ENST00000583038 CIRBP-AS1Q8TBR5 109 aa11.46□□□□□ -0.58
ERBB2-214ENST00000583038 IGLV5-45A0A087WSX0 123 aa11.46□□□□□ -0.58
ERBB2-214ENST00000583038 C1orf134Q5TEV5 83 aa11.45□□□□□ -0.58
ERBB2-214ENST00000583038 LINC00846Q9NV44 126 aa11.44□□□□□ -0.58
ERBB2-214ENST00000583038 H3BNG1 76 aa11.44□□□□□ -0.58
ERBB2-214ENST00000583038 CXCL6P80162 114 aa11.43□□□□□ -0.58
ERBB2-214ENST00000583038 IGHV6-1A0A0B4J1U7 121 aa11.42□□□□□ -0.58
ERBB2-214ENST00000583038 TRBV7-7A0A0K0K1E9 115 aa11.42□□□□□ -0.58
ERBB2-214ENST00000583038 TET2Q6N021 2002 aaPredicted RBP11.41□□□□□ -0.58
ERBB2-214ENST00000583038 A0A1B0GW54 56 aa11.41□□□□□ -0.58
ERBB2-214ENST00000583038 KLK9Q2XQG4 91 aa11.4□□□□□ -0.58
ERBB2-214ENST00000583038 C22orf24Q9Y442 160 aa11.4□□□□□ -0.58
ERBB2-214ENST00000583038 TMEM254Q8TBM7 123 aa11.4□□□□□ -0.58
ERBB2-214ENST00000583038 TRBV7-6A0A0J9YX20 115 aa11.39□□□□□ -0.59
ERBB2-214ENST00000583038 HCG22E2RYF7 251 aa11.38□□□□□ -0.59
ERBB2-214ENST00000583038 hDV103S1A0JD37 113 aa11.37□□□□□ -0.59
ERBB2-214ENST00000583038 SMCR5Q8TEV8 140 aa11.37□□□□□ -0.59
ERBB2-214ENST00000583038 POLQO75417 2590 aa11.37□□□□□ -0.59
ERBB2-214ENST00000583038 LIMD2Q9BT23 127 aa11.36□□□□□ -0.59
ERBB2-214ENST00000583038 A8MTW9 85 aa11.36□□□□□ -0.59
ERBB2-214ENST00000583038 H0Y9P7 68 aa11.36□□□□□ -0.59
ERBB2-214ENST00000583038 BCE1O60756 84 aa11.36□□□□□ -0.59
ERBB2-214ENST00000583038 MUC4Q99102 2169 aa11.36□□□□□ -0.59
ERBB2-214ENST00000583038 ACANP16112 2415 aa11.35□□□□□ -0.59
ERBB2-214ENST00000583038 PRLHP81277 87 aa11.34□□□□□ -0.59
ERBB2-214ENST00000583038 CDIP1Q9H305 208 aa11.34□□□□□ -0.59
ERBB2-214ENST00000583038 FSHBP01225 129 aa11.33□□□□□ -0.6
ERBB2-214ENST00000583038 ANKRD17O75179 2603 aaKnown RBP11.33□□□□□ -0.6
ERBB2-214ENST00000583038 EP400Q96L91 3159 aa11.32□□□□□ -0.6
ERBB2-214ENST00000583038 X6R8D5 127 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms