RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 PCP2Q8IVA1 136 aa7.87□□□□□ -1.15
CCDC57-216ENST00000582885 BOD1L2Q8IYS8 172 aa7.87□□□□□ -1.15
CCDC57-216ENST00000582885 ZNF815PA8K554 130 aa7.86□□□□□ -1.15
CCDC57-216ENST00000582885 LECT2O14960 151 aa7.86□□□□□ -1.15
CCDC57-216ENST00000582885 TRBV30A0A0K0K1B3 111 aa7.85□□□□□ -1.15
CCDC57-216ENST00000582885 RNF151Q2KHN1 245 aa7.85□□□□□ -1.15
CCDC57-216ENST00000582885 SLC25A34Q6PIV7 304 aa7.85□□□□□ -1.15
CCDC57-216ENST00000582885 C2orf82Q6UX34 121 aa7.85□□□□□ -1.15
CCDC57-216ENST00000582885 LINC00526Q96FQ7 95 aa7.85□□□□□ -1.15
CCDC57-216ENST00000582885 C14orf144Q96I85 54 aa7.85□□□□□ -1.15
CCDC57-216ENST00000582885 CAMK2N2Q96S95 79 aa7.85□□□□□ -1.15
CCDC57-216ENST00000582885 TTTY13Q9BZ97 58 aa7.85□□□□□ -1.15
CCDC57-216ENST00000582885 HYDINQ4G0P3 5121 aa7.84□□□□□ -1.15
CCDC57-216ENST00000582885 DNAH10Q8IVF4 4471 aa7.84□□□□□ -1.15
CCDC57-216ENST00000582885 FRAS1Q86XX4 4008 aa7.84□□□□□ -1.15
CCDC57-216ENST00000582885 LINC00587B1AMM8 73 aa7.84□□□□□ -1.15
CCDC57-216ENST00000582885 CNBPP62633 177 aaKnown RBP7.84□□□□□ -1.15
CCDC57-216ENST00000582885 SYCNQ0VAF6 134 aa7.84□□□□□ -1.15
CCDC57-216ENST00000582885 UNQ6190/PRO20217Q6UXQ8 127 aa7.84□□□□□ -1.15
CCDC57-216ENST00000582885 Q8N814 137 aa7.84□□□□□ -1.15
CCDC57-216ENST00000582885 SACSQ9NZJ4 4579 aa7.84□□□□□ -1.15
CCDC57-216ENST00000582885 A0A0J9YXY3 114 aa7.83□□□□□ -1.16
CCDC57-216ENST00000582885 EREGO14944 169 aa7.83□□□□□ -1.16
CCDC57-216ENST00000582885 SLPIP03973 132 aa7.83□□□□□ -1.16
CCDC57-216ENST00000582885 TNP2Q05952 138 aa7.83□□□□□ -1.16
CCDC57-216ENST00000582885 COX17Q14061 63 aa7.83□□□□□ -1.16
CCDC57-216ENST00000582885 LINC00336Q6ZUF6 198 aa7.83□□□□□ -1.16
CCDC57-216ENST00000582885 UQCR10Q9UDW1 63 aa7.83□□□□□ -1.16
CCDC57-216ENST00000582885 DNAH2Q9P225 4427 aa7.83□□□□□ -1.16
CCDC57-216ENST00000582885 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.82□□□□□ -1.16
CCDC57-216ENST00000582885 TIMM17BO60830 172 aa7.82□□□□□ -1.16
CCDC57-216ENST00000582885 C10orf25Q5T742 122 aa7.82□□□□□ -1.16
CCDC57-216ENST00000582885 Q6ZRU5 148 aa7.82□□□□□ -1.16
CCDC57-216ENST00000582885 CARD19Q96LW7 228 aa7.82□□□□□ -1.16
CCDC57-216ENST00000582885 C6orf48Q9UBA6 75 aa7.82□□□□□ -1.16
CCDC57-216ENST00000582885 TSTD3H0UI37 97 aa7.81□□□□□ -1.16
CCDC57-216ENST00000582885 CIRBPQ14011 172 aaKnown RBP7.81□□□□□ -1.16
CCDC57-216ENST00000582885 SCGB1D4Q6XE38 83 aa7.81□□□□□ -1.16
CCDC57-216ENST00000582885 MIEN1Q9BRT3 115 aa7.81□□□□□ -1.16
CCDC57-216ENST00000582885 PRO1933Q9H354 126 aa7.81□□□□□ -1.16
CCDC57-216ENST00000582885 HIGD1BQ9P298 99 aa7.81□□□□□ -1.16
CCDC57-216ENST00000582885 ERG28Q9UKR5 140 aa7.81□□□□□ -1.16
CCDC57-216ENST00000582885 DNAH17Q9UFH2 4485 aa7.8□□□□□ -1.16
CCDC57-216ENST00000582885 TLX1NBP0CAT3 122 aa7.79□□□□□ -1.16
CCDC57-216ENST00000582885 MEIG1Q5JSS6 88 aa7.79□□□□□ -1.16
CCDC57-216ENST00000582885 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.78□□□□□ -1.16
CCDC57-216ENST00000582885 TMEM238C9JI98 176 aa7.78□□□□□ -1.16
CCDC57-216ENST00000582885 C2orf91Q6ZV80 131 aa7.78□□□□□ -1.16
CCDC57-216ENST00000582885 Q6ZVH6 145 aa7.78□□□□□ -1.16
CCDC57-216ENST00000582885 C9orf163Q8N9P6 203 aa7.78□□□□□ -1.16
CCDC57-216ENST00000582885 LITAFQ99732 161 aa7.78□□□□□ -1.16
CCDC57-216ENST00000582885 SPANXB1Q9NS25 103 aaPredicted RBP7.78□□□□□ -1.16
CCDC57-216ENST00000582885 TP73-AS1Q9UF72 201 aa7.78□□□□□ -1.16
CCDC57-216ENST00000582885 PKIGQ9Y2B9 76 aa7.78□□□□□ -1.16
CCDC57-216ENST00000582885 KMT2CQ8NEZ4 4911 aaKnown RBP7.77□□□□□ -1.16
CCDC57-216ENST00000582885 RYR2Q92736 4967 aa7.77□□□□□ -1.17
CCDC57-216ENST00000582885 SMIM13P0DJ93 91 aa7.77□□□□□ -1.17
CCDC57-216ENST00000582885 C9orf116Q5BN46 136 aaPredicted RBP7.77□□□□□ -1.17
CCDC57-216ENST00000582885 LOC107984640A0A0U1RRK4 108 aa7.76□□□□□ -1.17
CCDC57-216ENST00000582885 NDUFC2-KCTD14E9PQ53 114 aa7.76□□□□□ -1.17
CCDC57-216ENST00000582885 PFN2P35080 140 aa7.76□□□□□ -1.17
CCDC57-216ENST00000582885 PTTG1IPP53801 180 aa7.76□□□□□ -1.17
CCDC57-216ENST00000582885 LINC00158P58513 81 aa7.76□□□□□ -1.17
CCDC57-216ENST00000582885 ADAMTSL4-AS1Q5T5F5 129 aa7.76□□□□□ -1.17
CCDC57-216ENST00000582885 SPANXDQ9BXN6 97 aa7.76□□□□□ -1.17
CCDC57-216ENST00000582885 PPDPFQ9H3Y8 114 aa7.76□□□□□ -1.17
CCDC57-216ENST00000582885 PGPEP1Q9NXJ5 209 aa7.76□□□□□ -1.17
CCDC57-216ENST00000582885 SPANXCQ9NY87 97 aa7.76□□□□□ -1.17
CCDC57-216ENST00000582885 GCSHP23434 173 aa7.75□□□□□ -1.17
CCDC57-216ENST00000582885 HNRNPA3P51991 378 aaKnown RBP7.75□□□□□ -1.17
CCDC57-216ENST00000582885 TAL2Q16559 108 aa7.75□□□□□ -1.17
CCDC57-216ENST00000582885 LOC107984156A0A0G2JMH3 177 aa7.74□□□□□ -1.17
CCDC57-216ENST00000582885 IFITM1P13164 125 aa7.74□□□□□ -1.17
CCDC57-216ENST00000582885 ARL17AQ8IVW1 177 aa7.74□□□□□ -1.17
CCDC57-216ENST00000582885 MIR7-3HGQ8N6C7 128 aa7.74□□□□□ -1.17
CCDC57-216ENST00000582885 COPS9Q8WXC6 57 aa7.74□□□□□ -1.17
CCDC57-216ENST00000582885 HECTD4Q9Y4D8 3996 aa7.74□□□□□ -1.17
CCDC57-216ENST00000582885 IGLV5-52A0A0A0MRZ9 124 aa7.73□□□□□ -1.17
CCDC57-216ENST00000582885 A0A0U1RRA0 63 aa7.73□□□□□ -1.17
CCDC57-216ENST00000582885 SRSF9Q13242 221 aaKnown RBP eCLIP7.73□□□□□ -1.17
CCDC57-216ENST00000582885 SDIM1Q6ZPB5 146 aa7.73□□□□□ -1.17
CCDC57-216ENST00000582885 FAT2Q9NYQ8 4349 aa7.72□□□□□ -1.17
CCDC57-216ENST00000582885 DDTP30046 118 aa7.72□□□□□ -1.17
CCDC57-216ENST00000582885 Q6ZRP5 223 aa7.72□□□□□ -1.17
CCDC57-216ENST00000582885 HIST1H4GQ99525 98 aa7.72□□□□□ -1.17
CCDC57-216ENST00000582885 SND1-IT1Q9HBX3 110 aa7.72□□□□□ -1.17
CCDC57-216ENST00000582885 PKD1P98161 4303 aa7.72□□□□□ -1.17
CCDC57-216ENST00000582885 A0A1B0GVY2 172 aa7.71□□□□□ -1.18
CCDC57-216ENST00000582885 C16orf90A8MZG2 172 aa7.71□□□□□ -1.18
CCDC57-216ENST00000582885 KRTAP10-2P60368 255 aa7.71□□□□□ -1.18
CCDC57-216ENST00000582885 HSD52Q0P140 79 aa7.71□□□□□ -1.18
CCDC57-216ENST00000582885 DAND5Q8N907 189 aa7.71□□□□□ -1.18
CCDC57-216ENST00000582885 LINC00308Q8TCZ7 52 aa7.71□□□□□ -1.18
CCDC57-216ENST00000582885 RPL18AQ02543 176 aaKnown RBP7.7□□□□□ -1.18
CCDC57-216ENST00000582885 CTAG1AP78358 180 aa7.69□□□□□ -1.18
CCDC57-216ENST00000582885 GAGE2EQ4V326 116 aa7.69□□□□□ -1.18
CCDC57-216ENST00000582885 SOSTDC1Q6X4U4 206 aa7.69□□□□□ -1.18
CCDC57-216ENST00000582885 MUSTN1Q8IVN3 82 aa7.69□□□□□ -1.18
CCDC57-216ENST00000582885 LINC00474Q9P2X8 69 aa7.69□□□□□ -1.18
CCDC57-216ENST00000582885 GAGE2DQ9UEU5 116 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms