RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 CNBPP62633 177 aaKnown RBP6.19□□□□□ -1.42
RFFL-210ENST00000582308 SYCNQ0VAF6 134 aa6.19□□□□□ -1.42
RFFL-210ENST00000582308 CDPF1Q6NVV7 123 aa6.19□□□□□ -1.42
RFFL-210ENST00000582308 PLEKHB2Q96CS7 222 aa6.19□□□□□ -1.42
RFFL-210ENST00000582308 F8WDY8 70 aa6.18□□□□□ -1.42
RFFL-210ENST00000582308 J3QQQ9 107 aa6.18□□□□□ -1.42
RFFL-210ENST00000582308 CKS1BP61024 79 aa6.18□□□□□ -1.42
RFFL-210ENST00000582308 Q6ZRU5 148 aa6.18□□□□□ -1.42
RFFL-210ENST00000582308 CAMK2N2Q96S95 79 aa6.18□□□□□ -1.42
RFFL-210ENST00000582308 PKHD1P08F94 4074 aa6.18□□□□□ -1.42
RFFL-210ENST00000582308 DNAH5Q8TE73 4624 aa6.17□□□□□ -1.42
RFFL-210ENST00000582308 NDUFA1O15239 70 aa6.17□□□□□ -1.42
RFFL-210ENST00000582308 CXCL5P42830 114 aa6.17□□□□□ -1.42
RFFL-210ENST00000582308 ZNF625Q96I27 306 aaPredicted RBP6.17□□□□□ -1.42
RFFL-210ENST00000582308 CARD19Q96LW7 228 aa6.17□□□□□ -1.42
RFFL-210ENST00000582308 NDUFA12Q9UI09 145 aa6.17□□□□□ -1.42
RFFL-210ENST00000582308 IGLV5-52A0A0A0MRZ9 124 aa6.16□□□□□ -1.42
RFFL-210ENST00000582308 HSBP1L1C9JCN9 74 aa6.16□□□□□ -1.42
RFFL-210ENST00000582308 LGALS3P17931 250 aaKnown RBP6.16□□□□□ -1.42
RFFL-210ENST00000582308 LINC01620Q4KN68 170 aa6.16□□□□□ -1.42
RFFL-210ENST00000582308 C9orf116Q5BN46 136 aaPredicted RBP6.16□□□□□ -1.42
RFFL-210ENST00000582308 C9orf163Q8N9P6 203 aa6.16□□□□□ -1.42
RFFL-210ENST00000582308 TTTY13Q9BZ97 58 aa6.16□□□□□ -1.42
RFFL-210ENST00000582308 PGPEP1Q9NXJ5 209 aa6.16□□□□□ -1.42
RFFL-210ENST00000582308 C6orf48Q9UBA6 75 aa6.16□□□□□ -1.42
RFFL-210ENST00000582308 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.15□□□□□ -1.42
RFFL-210ENST00000582308 TRBV30A0A0K0K1B3 111 aa6.15□□□□□ -1.42
RFFL-210ENST00000582308 NMUP48645 174 aa6.15□□□□□ -1.42
RFFL-210ENST00000582308 RNF151Q2KHN1 245 aa6.15□□□□□ -1.42
RFFL-210ENST00000582308 PCP2Q8IVA1 136 aa6.15□□□□□ -1.42
RFFL-210ENST00000582308 VAMP8Q9BV40 100 aa6.15□□□□□ -1.42
RFFL-210ENST00000582308 PAM16Q9Y3D7 125 aa6.15□□□□□ -1.42
RFFL-210ENST00000582308 MYMXA0A1B0GTQ4 84 aa6.14□□□□□ -1.43
RFFL-210ENST00000582308 SPATA45Q537H7 98 aa6.14□□□□□ -1.43
RFFL-210ENST00000582308 SFTA2Q6UW10 78 aa6.14□□□□□ -1.43
RFFL-210ENST00000582308 ZNF815PA8K554 130 aa6.13□□□□□ -1.43
RFFL-210ENST00000582308 SMIM6P0DI80 62 aa6.13□□□□□ -1.43
RFFL-210ENST00000582308 HERV-K104P63124 156 aa6.13□□□□□ -1.43
RFFL-210ENST00000582308 SDIM1Q6ZPB5 146 aa6.13□□□□□ -1.43
RFFL-210ENST00000582308 DNAH8Q96JB1 4490 aa6.13□□□□□ -1.43
RFFL-210ENST00000582308 DYNC1H1Q14204 4646 aaKnown RBP6.13□□□□□ -1.43
RFFL-210ENST00000582308 A0A0J9YXY3 114 aa6.12□□□□□ -1.43
RFFL-210ENST00000582308 GCSHP23434 173 aa6.12□□□□□ -1.43
RFFL-210ENST00000582308 ERG28Q9UKR5 140 aa6.12□□□□□ -1.43
RFFL-210ENST00000582308 LOC107984640A0A0U1RRK4 108 aa6.11□□□□□ -1.43
RFFL-210ENST00000582308 TLX1NBP0CAT3 122 aa6.11□□□□□ -1.43
RFFL-210ENST00000582308 SMIM13P0DJ93 91 aa6.11□□□□□ -1.43
RFFL-210ENST00000582308 COX8AP10176 69 aa6.11□□□□□ -1.43
RFFL-210ENST00000582308 PFN2P35080 140 aa6.11□□□□□ -1.43
RFFL-210ENST00000582308 KRTAP10-1P60331 282 aa6.11□□□□□ -1.43
RFFL-210ENST00000582308 Q6ZRP5 223 aa6.11□□□□□ -1.43
RFFL-210ENST00000582308 C14orf144Q96I85 54 aa6.11□□□□□ -1.43
RFFL-210ENST00000582308 TP73-AS1Q9UF72 201 aa6.11□□□□□ -1.43
RFFL-210ENST00000582308 LRP1BQ9NZR2 4599 aa6.1□□□□□ -1.43
RFFL-210ENST00000582308 A0A096LNI7 61 aa6.1□□□□□ -1.43
RFFL-210ENST00000582308 A0A0U1RRA0 63 aa6.1□□□□□ -1.43
RFFL-210ENST00000582308 NDUFC2-KCTD14E9PQ53 114 aa6.1□□□□□ -1.43
RFFL-210ENST00000582308 S100A12P80511 92 aa6.1□□□□□ -1.43
RFFL-210ENST00000582308 COX17Q14061 63 aa6.1□□□□□ -1.43
RFFL-210ENST00000582308 BOD1L2Q8IYS8 172 aa6.1□□□□□ -1.43
RFFL-210ENST00000582308 C16orf90A8MZG2 172 aa6.09□□□□□ -1.43
RFFL-210ENST00000582308 PANO1I0J062 215 aa6.09□□□□□ -1.43
RFFL-210ENST00000582308 DLEU1O43261 78 aa6.09□□□□□ -1.43
RFFL-210ENST00000582308 CHTF8P0CG12 524 aa6.09□□□□□ -1.43
RFFL-210ENST00000582308 LINC00158P58513 81 aa6.09□□□□□ -1.43
RFFL-210ENST00000582308 RPL18AQ02543 176 aaKnown RBP6.09□□□□□ -1.43
RFFL-210ENST00000582308 GAGE2BQ13066 116 aa6.09□□□□□ -1.43
RFFL-210ENST00000582308 MEIG1Q5JSS6 88 aa6.09□□□□□ -1.43
RFFL-210ENST00000582308 ADAMTSL4-AS1Q5T5F5 129 aa6.09□□□□□ -1.43
RFFL-210ENST00000582308 LITAFQ99732 161 aa6.09□□□□□ -1.43
RFFL-210ENST00000582308 LINC00587B1AMM8 73 aa6.08□□□□□ -1.44
RFFL-210ENST00000582308 TIMM17BO60830 172 aa6.08□□□□□ -1.44
RFFL-210ENST00000582308 PTTG1IPP53801 180 aa6.08□□□□□ -1.44
RFFL-210ENST00000582308 GAGE2EQ4V326 116 aa6.08□□□□□ -1.44
RFFL-210ENST00000582308 MIR7-3HGQ8N6C7 128 aa6.08□□□□□ -1.44
RFFL-210ENST00000582308 C12orf57Q99622 126 aa6.08□□□□□ -1.44
RFFL-210ENST00000582308 FAM30AQ9NZY2 134 aa6.08□□□□□ -1.44
RFFL-210ENST00000582308 GAGE2DQ9UEU5 116 aa6.08□□□□□ -1.44
RFFL-210ENST00000582308 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.08□□□□□ -1.44
RFFL-210ENST00000582308 IGKV2-24A0A0C4DH68 120 aa6.07□□□□□ -1.44
RFFL-210ENST00000582308 CIRBPQ14011 172 aaKnown RBP6.07□□□□□ -1.44
RFFL-210ENST00000582308 C9orf129Q5T035 196 aaKnown RBP6.07□□□□□ -1.44
RFFL-210ENST00000582308 SLC25A34Q6PIV7 304 aa6.07□□□□□ -1.44
RFFL-210ENST00000582308 SCGB1D4Q6XE38 83 aa6.07□□□□□ -1.44
RFFL-210ENST00000582308 Q6ZSA8 131 aa6.07□□□□□ -1.44
RFFL-210ENST00000582308 LINC00518Q8N0U6 118 aa6.07□□□□□ -1.44
RFFL-210ENST00000582308 DAND5Q8N907 189 aa6.07□□□□□ -1.44
RFFL-210ENST00000582308 SND1-IT1Q9HBX3 110 aa6.07□□□□□ -1.44
RFFL-210ENST00000582308 XAGE1AQ9HD64 81 aa6.07□□□□□ -1.44
RFFL-210ENST00000582308 PKIGQ9Y2B9 76 aa6.07□□□□□ -1.44
RFFL-210ENST00000582308 SPACA4Q8TDM5 124 aa6.06□□□□□ -1.44
RFFL-210ENST00000582308 PRO1933Q9H354 126 aa6.06□□□□□ -1.44
RFFL-210ENST00000582308 EIF4EBP3O60516 100 aaPredicted RBP6.05□□□□□ -1.44
RFFL-210ENST00000582308 SOSTDC1Q6X4U4 206 aa6.05□□□□□ -1.44
RFFL-210ENST00000582308 C2orf91Q6ZV80 131 aa6.05□□□□□ -1.44
RFFL-210ENST00000582308 A0A1W2PNN7 141 aa6.04□□□□□ -1.44
RFFL-210ENST00000582308 FAM168BA1KXE4 195 aa6.04□□□□□ -1.44
RFFL-210ENST00000582308 TMEM238C9JI98 176 aa6.04□□□□□ -1.44
RFFL-210ENST00000582308 KRTAP7-1Q8IUC3 87 aa6.04□□□□□ -1.44
RFFL-210ENST00000582308 SPANXDQ9BXN6 97 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 642.8 ms