RNA–Protein interactions for RNA: ENST00000582009.5

RAB11FIP4-208, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 3

Gene RAB11FIP4, Length 596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-208ENST00000582009 ATP5LO75964 103 aa12.82□□□□□ -0.36
RAB11FIP4-208ENST00000582009 TRGC2P03986 189 aa12.82□□□□□ -0.36
RAB11FIP4-208ENST00000582009 BAGE3Q86Y29 109 aa12.82□□□□□ -0.36
RAB11FIP4-208ENST00000582009 Q8IZM0 81 aa12.82□□□□□ -0.36
RAB11FIP4-208ENST00000582009 CHCHD1Q96BP2 118 aaKnown RBP12.81□□□□□ -0.36
RAB11FIP4-208ENST00000582009 A0A1W2PNN7 141 aa12.8□□□□□ -0.36
RAB11FIP4-208ENST00000582009 SPINK8P0C7L1 97 aa12.8□□□□□ -0.36
RAB11FIP4-208ENST00000582009 C9orf116Q5BN46 136 aaPredicted RBP12.8□□□□□ -0.36
RAB11FIP4-208ENST00000582009 PDZD11Q5EBL8 140 aa12.8□□□□□ -0.36
RAB11FIP4-208ENST00000582009 Q6ZRP5 223 aa12.8□□□□□ -0.36
RAB11FIP4-208ENST00000582009 SMIM1B2RUZ4 78 aa12.79□□□□□ -0.36
RAB11FIP4-208ENST00000582009 H3BRM9 83 aa12.79□□□□□ -0.36
RAB11FIP4-208ENST00000582009 J3QL48 77 aa12.79□□□□□ -0.36
RAB11FIP4-208ENST00000582009 TLX1NBP0CAT3 122 aa12.78□□□□□ -0.36
RAB11FIP4-208ENST00000582009 COX7B2Q8TF08 81 aa12.78□□□□□ -0.36
RAB11FIP4-208ENST00000582009 IGLV5-45A0A087WSX0 123 aa12.77□□□□□ -0.37
RAB11FIP4-208ENST00000582009 HSBP1O75506 76 aa12.77□□□□□ -0.37
RAB11FIP4-208ENST00000582009 IGLC3P0DOY3 106 aa12.76□□□□□ -0.37
RAB11FIP4-208ENST00000582009 HNRNPA3P51991 378 aaKnown RBP12.76□□□□□ -0.37
RAB11FIP4-208ENST00000582009 NDUFC2-KCTD14E9PQ53 114 aa12.75□□□□□ -0.37
RAB11FIP4-208ENST00000582009 F8VRH5 84 aa12.75□□□□□ -0.37
RAB11FIP4-208ENST00000582009 CXCL5P42830 114 aa12.75□□□□□ -0.37
RAB11FIP4-208ENST00000582009 COLCA2A8K830 154 aa12.74□□□□□ -0.37
RAB11FIP4-208ENST00000582009 FAM19A5Q7Z5A7 132 aaPredicted RBP12.74□□□□□ -0.37
RAB11FIP4-208ENST00000582009 FAM19A2Q8N3H0 131 aa12.74□□□□□ -0.37
RAB11FIP4-208ENST00000582009 FAM168BA1KXE4 195 aa12.73□□□□□ -0.37
RAB11FIP4-208ENST00000582009 PHF5AQ7RTV0 110 aaKnown RBP12.73□□□□□ -0.37
RAB11FIP4-208ENST00000582009 IFI27L1Q96BM0 104 aa12.73□□□□□ -0.37
RAB11FIP4-208ENST00000582009 PRR3P79522 188 aaKnown RBP12.72□□□□□ -0.37
RAB11FIP4-208ENST00000582009 TMEM170BQ5T4T1 132 aa12.72□□□□□ -0.37
RAB11FIP4-208ENST00000582009 CHTOPQ9Y3Y2 248 aaKnown RBP12.72□□□□□ -0.37
RAB11FIP4-208ENST00000582009 SCO1O75880 301 aa12.71□□□□□ -0.37
RAB11FIP4-208ENST00000582009 ZNF22P17026 224 aaPredicted RBP12.71□□□□□ -0.37
RAB11FIP4-208ENST00000582009 KRTAP29-1A8MX34 341 aaPredicted RBP12.7□□□□□ -0.38
RAB11FIP4-208ENST00000582009 C11orf86A6NJI1 115 aa12.69□□□□□ -0.38
RAB11FIP4-208ENST00000582009 SERF1AO75920 110 aa12.69□□□□□ -0.38
RAB11FIP4-208ENST00000582009 DMBT1Q9UGM3 2413 aaPredicted RBP12.68□□□□□ -0.38
RAB11FIP4-208ENST00000582009 H0Y8G0 127 aa12.68□□□□□ -0.38
RAB11FIP4-208ENST00000582009 OXTP01178 125 aa12.67□□□□□ -0.38
RAB11FIP4-208ENST00000582009 C9orf129Q5T035 196 aaKnown RBP12.67□□□□□ -0.38
RAB11FIP4-208ENST00000582009 XAGE1AQ9HD64 81 aa12.67□□□□□ -0.38
RAB11FIP4-208ENST00000582009 TRAV12-1A0A0B4J245 112 aa12.66□□□□□ -0.38
RAB11FIP4-208ENST00000582009 M0QXV9 152 aa12.65□□□□□ -0.38
RAB11FIP4-208ENST00000582009 LEPROTL1O95214 131 aa12.65□□□□□ -0.38
RAB11FIP4-208ENST00000582009 IGLV5-39A0A0G2JS06 123 aa12.64□□□□□ -0.39
RAB11FIP4-208ENST00000582009 FABP4P15090 132 aa12.64□□□□□ -0.39
RAB11FIP4-208ENST00000582009 UBE2BP63146 152 aa12.64□□□□□ -0.39
RAB11FIP4-208ENST00000582009 PSORS1C2Q9UIG4 136 aa12.64□□□□□ -0.39
RAB11FIP4-208ENST00000582009 C1orf137Q5JT78 98 aa12.63□□□□□ -0.39
RAB11FIP4-208ENST00000582009 NUPR1O60356 82 aa12.62□□□□□ -0.39
RAB11FIP4-208ENST00000582009 LINC00310P59036 64 aa12.62□□□□□ -0.39
RAB11FIP4-208ENST00000582009 PFN2P35080 140 aa12.61□□□□□ -0.39
RAB11FIP4-208ENST00000582009 KRTAP7-1Q8IUC3 87 aa12.6□□□□□ -0.39
RAB11FIP4-208ENST00000582009 ZNF625Q96I27 306 aaPredicted RBP12.6□□□□□ -0.39
RAB11FIP4-208ENST00000582009 HSPB8Q9UJY1 196 aa12.6□□□□□ -0.39
RAB11FIP4-208ENST00000582009 MYCBP2O75592 4640 aa12.59□□□□□ -0.39
RAB11FIP4-208ENST00000582009 SERTAD4-AS1Q5TG53 156 aa12.59□□□□□ -0.39
RAB11FIP4-208ENST00000582009 SPINK6Q6UWN8 80 aa12.59□□□□□ -0.39
RAB11FIP4-208ENST00000582009 TMEM223A0PJW6 202 aa12.58□□□□□ -0.4
RAB11FIP4-208ENST00000582009 ERG28Q9UKR5 140 aa12.57□□□□□ -0.4
RAB11FIP4-208ENST00000582009 C22orf24Q9Y442 160 aa12.57□□□□□ -0.4
RAB11FIP4-208ENST00000582009 ODF1Q14990 250 aa12.56□□□□□ -0.4
RAB11FIP4-208ENST00000582009 LBHQ53QV2 105 aaPredicted RBP12.56□□□□□ -0.4
RAB11FIP4-208ENST00000582009 KRTAP11-1Q8IUC1 163 aa12.56□□□□□ -0.4
RAB11FIP4-208ENST00000582009 HIST1H2BKO60814 126 aa12.55□□□□□ -0.4
RAB11FIP4-208ENST00000582009 HIST1H2BJP06899 126 aa12.55□□□□□ -0.4
RAB11FIP4-208ENST00000582009 HIST1H2BOP23527 126 aa12.55□□□□□ -0.4
RAB11FIP4-208ENST00000582009 HIST1H2BBP33778 126 aa12.55□□□□□ -0.4
RAB11FIP4-208ENST00000582009 HIST1H2BDP58876 126 aa12.55□□□□□ -0.4
RAB11FIP4-208ENST00000582009 HIST1H2BCP62807 126 aa12.55□□□□□ -0.4
RAB11FIP4-208ENST00000582009 HIST2H2BEQ16778 126 aa12.55□□□□□ -0.4
RAB11FIP4-208ENST00000582009 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.55□□□□□ -0.4
RAB11FIP4-208ENST00000582009 SFTA2Q6UW10 78 aa12.55□□□□□ -0.4
RAB11FIP4-208ENST00000582009 HIST1H2BHQ93079 126 aa12.55□□□□□ -0.4
RAB11FIP4-208ENST00000582009 HIST1H2BNQ99877 126 aa12.55□□□□□ -0.4
RAB11FIP4-208ENST00000582009 HIST1H2BMQ99879 126 aa12.55□□□□□ -0.4
RAB11FIP4-208ENST00000582009 SRSF9Q13242 221 aaKnown RBP eCLIP12.54□□□□□ -0.4
RAB11FIP4-208ENST00000582009 REG3GQ6UW15 175 aa12.54□□□□□ -0.4
RAB11FIP4-208ENST00000582009 IGLV7-43P04211 117 aa12.52□□□□□ -0.41
RAB11FIP4-208ENST00000582009 COX17Q14061 63 aa12.52□□□□□ -0.41
RAB11FIP4-208ENST00000582009 MRPL55Q7Z7F7 128 aaKnown RBP12.52□□□□□ -0.41
RAB11FIP4-208ENST00000582009 NKAPP1Q8N9T2 125 aa12.52□□□□□ -0.41
RAB11FIP4-208ENST00000582009 PMCHL2Q9BQD1 86 aa12.52□□□□□ -0.41
RAB11FIP4-208ENST00000582009 MAP1LC3CQ9BXW4 147 aa12.52□□□□□ -0.41
RAB11FIP4-208ENST00000582009 PLNP26678 52 aa12.51□□□□□ -0.41
RAB11FIP4-208ENST00000582009 LINC00158P58513 81 aa12.51□□□□□ -0.41
RAB11FIP4-208ENST00000582009 A0A0U1RRA0 63 aa12.5□□□□□ -0.41
RAB11FIP4-208ENST00000582009 ATP6V1G1O75348 118 aa12.5□□□□□ -0.41
RAB11FIP4-208ENST00000582009 DPM2O94777 84 aa12.5□□□□□ -0.41
RAB11FIP4-208ENST00000582009 TP73-AS1Q9UF72 201 aa12.5□□□□□ -0.41
RAB11FIP4-208ENST00000582009 GAGE10A6NGK3 116 aa12.49□□□□□ -0.41
RAB11FIP4-208ENST00000582009 SND1-IT1Q9HBX3 110 aa12.49□□□□□ -0.41
RAB11FIP4-208ENST00000582009 PLA2G2DQ9UNK4 145 aa12.49□□□□□ -0.41
RAB11FIP4-208ENST00000582009 PKHD1L1Q86WI1 4243 aa12.49□□□□□ -0.41
RAB11FIP4-208ENST00000582009 MEIG1Q5JSS6 88 aa12.48□□□□□ -0.41
RAB11FIP4-208ENST00000582009 LINC00167Q96N53 147 aa12.48□□□□□ -0.41
RAB11FIP4-208ENST00000582009 RPL37AP8A6NKH3 93 aa12.47□□□□□ -0.41
RAB11FIP4-208ENST00000582009 IGKCP01834 107 aa12.47□□□□□ -0.41
RAB11FIP4-208ENST00000582009 HERVK_113P61574 105 aa12.47□□□□□ -0.41
RAB11FIP4-208ENST00000582009 DIRC1Q969H9 104 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms