RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 HERC1Q15751 4861 aa7.91□□□□□ -1.14
SNORD55-201ENST00000581525 A0A1W2PNN7 141 aa7.91□□□□□ -1.14
SNORD55-201ENST00000581525 SMIM1B2RUZ4 78 aa7.91□□□□□ -1.14
SNORD55-201ENST00000581525 ODF1Q14990 250 aa7.91□□□□□ -1.14
SNORD55-201ENST00000581525 Q6ZRP5 223 aa7.91□□□□□ -1.14
SNORD55-201ENST00000581525 GAGE2BQ13066 116 aa7.9□□□□□ -1.14
SNORD55-201ENST00000581525 PMCHL1Q16048 86 aa7.9□□□□□ -1.14
SNORD55-201ENST00000581525 C6orf226Q5I0X4 101 aa7.9□□□□□ -1.14
SNORD55-201ENST00000581525 C2orf82Q6UX34 121 aa7.9□□□□□ -1.14
SNORD55-201ENST00000581525 FLG2Q5D862 2391 aaPredicted RBP7.9□□□□□ -1.15
SNORD55-201ENST00000581525 IGLV5-39A0A0G2JS06 123 aa7.89□□□□□ -1.15
SNORD55-201ENST00000581525 LINC00469Q8N7U9 141 aa7.89□□□□□ -1.15
SNORD55-201ENST00000581525 SVIPQ8NHG7 77 aa7.89□□□□□ -1.15
SNORD55-201ENST00000581525 TRAV12-1A0A0B4J245 112 aa7.88□□□□□ -1.15
SNORD55-201ENST00000581525 KRTAP29-1A8MX34 341 aaPredicted RBP7.88□□□□□ -1.15
SNORD55-201ENST00000581525 NDUFC2-KCTD14E9PQ53 114 aa7.88□□□□□ -1.15
SNORD55-201ENST00000581525 PRSS2P07478 247 aa7.88□□□□□ -1.15
SNORD55-201ENST00000581525 CXCL5P42830 114 aa7.88□□□□□ -1.15
SNORD55-201ENST00000581525 LINC00310P59036 64 aa7.88□□□□□ -1.15
SNORD55-201ENST00000581525 C7orf33Q8WU49 177 aa7.88□□□□□ -1.15
SNORD55-201ENST00000581525 PACRGQ96M98 296 aaPredicted RBP7.88□□□□□ -1.15
SNORD55-201ENST00000581525 F8VRH5 84 aa7.87□□□□□ -1.15
SNORD55-201ENST00000581525 S100A6P06703 90 aa7.87□□□□□ -1.15
SNORD55-201ENST00000581525 ZNF22P17026 224 aaPredicted RBP7.87□□□□□ -1.15
SNORD55-201ENST00000581525 HNRNPA3P51991 378 aaKnown RBP7.87□□□□□ -1.15
SNORD55-201ENST00000581525 C9orf116Q5BN46 136 aaPredicted RBP7.87□□□□□ -1.15
SNORD55-201ENST00000581525 TMA7Q9Y2S6 64 aaKnown RBP7.87□□□□□ -1.15
SNORD55-201ENST00000581525 H3BRM9 83 aa7.86□□□□□ -1.15
SNORD55-201ENST00000581525 CKS1BP61024 79 aa7.86□□□□□ -1.15
SNORD55-201ENST00000581525 RPL18AQ02543 176 aaKnown RBP7.86□□□□□ -1.15
SNORD55-201ENST00000581525 BAGE3Q86Y29 109 aa7.86□□□□□ -1.15
SNORD55-201ENST00000581525 KRTAP7-1Q8IUC3 87 aa7.86□□□□□ -1.15
SNORD55-201ENST00000581525 COX7B2Q8TF08 81 aa7.86□□□□□ -1.15
SNORD55-201ENST00000581525 TOMM7Q9P0U1 55 aa7.86□□□□□ -1.15
SNORD55-201ENST00000581525 HSBP1O75506 76 aa7.85□□□□□ -1.15
SNORD55-201ENST00000581525 OXTP01178 125 aa7.85□□□□□ -1.15
SNORD55-201ENST00000581525 IFI27L1Q96BM0 104 aa7.85□□□□□ -1.15
SNORD55-201ENST00000581525 C11orf86A6NJI1 115 aa7.84□□□□□ -1.15
SNORD55-201ENST00000581525 SERF1AO75920 110 aa7.84□□□□□ -1.15
SNORD55-201ENST00000581525 SPINK8P0C7L1 97 aa7.84□□□□□ -1.15
SNORD55-201ENST00000581525 FAM19A2Q8N3H0 131 aa7.84□□□□□ -1.15
SNORD55-201ENST00000581525 NUPR1O60356 82 aa7.83□□□□□ -1.16
SNORD55-201ENST00000581525 NDUFA6P56556 154 aa7.83□□□□□ -1.16
SNORD55-201ENST00000581525 PRR3P79522 188 aaKnown RBP7.83□□□□□ -1.16
SNORD55-201ENST00000581525 SRSF9Q13242 221 aaKnown RBP eCLIP7.83□□□□□ -1.16
SNORD55-201ENST00000581525 C9orf129Q5T035 196 aaKnown RBP7.83□□□□□ -1.16
SNORD55-201ENST00000581525 CHTOPQ9Y3Y2 248 aaKnown RBP7.83□□□□□ -1.16
SNORD55-201ENST00000581525 SCO1O75880 301 aa7.82□□□□□ -1.16
SNORD55-201ENST00000581525 DMBT1Q9UGM3 2413 aaPredicted RBP7.81□□□□□ -1.16
SNORD55-201ENST00000581525 FAM168BA1KXE4 195 aa7.81□□□□□ -1.16
SNORD55-201ENST00000581525 GAGE2EQ4V326 116 aa7.81□□□□□ -1.16
SNORD55-201ENST00000581525 GAGE2DQ9UEU5 116 aa7.81□□□□□ -1.16
SNORD55-201ENST00000581525 TMEM223A0PJW6 202 aa7.8□□□□□ -1.16
SNORD55-201ENST00000581525 HIST1H2BKO60814 126 aa7.8□□□□□ -1.16
SNORD55-201ENST00000581525 LEPROTL1O95214 131 aa7.8□□□□□ -1.16
SNORD55-201ENST00000581525 HIST1H2BJP06899 126 aa7.8□□□□□ -1.16
SNORD55-201ENST00000581525 HIST1H2BOP23527 126 aa7.8□□□□□ -1.16
SNORD55-201ENST00000581525 HIST1H2BBP33778 126 aa7.8□□□□□ -1.16
SNORD55-201ENST00000581525 HIST1H2BDP58876 126 aa7.8□□□□□ -1.16
SNORD55-201ENST00000581525 HIST1H2BCP62807 126 aa7.8□□□□□ -1.16
SNORD55-201ENST00000581525 HIST2H2BEQ16778 126 aa7.8□□□□□ -1.16
SNORD55-201ENST00000581525 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.8□□□□□ -1.16
SNORD55-201ENST00000581525 PHF5AQ7RTV0 110 aaKnown RBP7.8□□□□□ -1.16
SNORD55-201ENST00000581525 HIST1H2BHQ93079 126 aa7.8□□□□□ -1.16
SNORD55-201ENST00000581525 HIST1H2BNQ99877 126 aa7.8□□□□□ -1.16
SNORD55-201ENST00000581525 HIST1H2BMQ99879 126 aa7.8□□□□□ -1.16
SNORD55-201ENST00000581525 PLA2G2DQ9UNK4 145 aa7.8□□□□□ -1.16
SNORD55-201ENST00000581525 SFTA2Q6UW10 78 aa7.79□□□□□ -1.16
SNORD55-201ENST00000581525 ZNF625Q96I27 306 aaPredicted RBP7.79□□□□□ -1.16
SNORD55-201ENST00000581525 COX17Q14061 63 aa7.78□□□□□ -1.16
SNORD55-201ENST00000581525 TMEM170BQ5T4T1 132 aa7.78□□□□□ -1.16
SNORD55-201ENST00000581525 TP73-AS1Q9UF72 201 aa7.78□□□□□ -1.16
SNORD55-201ENST00000581525 PSORS1C2Q9UIG4 136 aa7.78□□□□□ -1.16
SNORD55-201ENST00000581525 TNXBP22105 4242 aa7.78□□□□□ -1.16
SNORD55-201ENST00000581525 TMEM238LA0A1B0GVL6 79 aa7.77□□□□□ -1.17
SNORD55-201ENST00000581525 COA6Q5JTJ3 125 aaKnown RBP7.77□□□□□ -1.17
SNORD55-201ENST00000581525 SPINK6Q6UWN8 80 aa7.77□□□□□ -1.17
SNORD55-201ENST00000581525 KRTAP11-1Q8IUC1 163 aa7.77□□□□□ -1.17
SNORD55-201ENST00000581525 HSPB8Q9UJY1 196 aa7.77□□□□□ -1.17
SNORD55-201ENST00000581525 IGLV5-37A0A075B6J1 123 aa7.76□□□□□ -1.17
SNORD55-201ENST00000581525 SERTAD4-AS1Q5TG53 156 aa7.76□□□□□ -1.17
SNORD55-201ENST00000581525 C22orf24Q9Y442 160 aa7.76□□□□□ -1.17
SNORD55-201ENST00000581525 M0QXV9 152 aa7.75□□□□□ -1.17
SNORD55-201ENST00000581525 FAM19A5Q7Z5A7 132 aaPredicted RBP7.75□□□□□ -1.17
SNORD55-201ENST00000581525 XAGE1AQ9HD64 81 aa7.75□□□□□ -1.17
SNORD55-201ENST00000581525 MT1HL1P0DM35 61 aa7.74□□□□□ -1.17
SNORD55-201ENST00000581525 J3QL48 77 aa7.73□□□□□ -1.17
SNORD55-201ENST00000581525 FABP4P15090 132 aa7.73□□□□□ -1.17
SNORD55-201ENST00000581525 PLNP26678 52 aa7.73□□□□□ -1.17
SNORD55-201ENST00000581525 ERG28Q9UKR5 140 aa7.73□□□□□ -1.17
SNORD55-201ENST00000581525 LBHQ53QV2 105 aaPredicted RBP7.72□□□□□ -1.17
SNORD55-201ENST00000581525 LINC01600Q96MT4 127 aa7.72□□□□□ -1.17
SNORD55-201ENST00000581525 DPM2O94777 84 aa7.71□□□□□ -1.18
SNORD55-201ENST00000581525 IGLV7-43P04211 117 aa7.71□□□□□ -1.18
SNORD55-201ENST00000581525 C1orf137Q5JT78 98 aa7.71□□□□□ -1.18
SNORD55-201ENST00000581525 MAP1LC3CQ9BXW4 147 aa7.71□□□□□ -1.18
SNORD55-201ENST00000581525 LEPROTO15243 131 aa7.7□□□□□ -1.18
SNORD55-201ENST00000581525 HERV-K104P63124 156 aa7.7□□□□□ -1.18
SNORD55-201ENST00000581525 MRPL55Q7Z7F7 128 aaKnown RBP7.7□□□□□ -1.18
SNORD55-201ENST00000581525 SND1-IT1Q9HBX3 110 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms