RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 SPATA3Q8NHX4 192 aa10.22□□□□□ -0.77
CSNK1D-217ENST00000581241 Q6ZTC4 211 aa10.22□□□□□ -0.77
CSNK1D-217ENST00000581241 ACACAQ13085 2346 aa10.21□□□□□ -0.77
CSNK1D-217ENST00000581241 PRO0461Q9UI25 63 aa10.21□□□□□ -0.77
CSNK1D-217ENST00000581241 RPS28P62857 69 aaKnown RBP10.21□□□□□ -0.78
CSNK1D-217ENST00000581241 SPINK1P00995 79 aa10.2□□□□□ -0.78
CSNK1D-217ENST00000581241 C4orf26Q17RF5 130 aa10.2□□□□□ -0.78
CSNK1D-217ENST00000581241 X6R8D5 127 aa10.19□□□□□ -0.78
CSNK1D-217ENST00000581241 CACNA1BQ00975 2339 aa10.19□□□□□ -0.78
CSNK1D-217ENST00000581241 KIAA0087Q14695 138 aa10.19□□□□□ -0.78
CSNK1D-217ENST00000581241 FAM19A4Q96LR4 140 aa10.19□□□□□ -0.78
CSNK1D-217ENST00000581241 PRO3102Q9H379 93 aa10.19□□□□□ -0.78
CSNK1D-217ENST00000581241 DSCAMO60469 2012 aa10.18□□□□□ -0.78
CSNK1D-217ENST00000581241 ABCA4P78363 2273 aa10.18□□□□□ -0.78
CSNK1D-217ENST00000581241 EP300Q09472 2414 aaPredicted RBP10.18□□□□□ -0.78
CSNK1D-217ENST00000581241 C11orf72Q8NBR9 251 aa10.17□□□□□ -0.78
CSNK1D-217ENST00000581241 Q9UF83 564 aa10.17□□□□□ -0.78
CSNK1D-217ENST00000581241 ADAMTS20P59510 1910 aa10.17□□□□□ -0.78
CSNK1D-217ENST00000581241 SMCR5Q8TEV8 140 aa10.17□□□□□ -0.78
CSNK1D-217ENST00000581241 C22orf24Q9Y442 160 aa10.17□□□□□ -0.78
CSNK1D-217ENST00000581241 ABCA1O95477 2261 aa10.16□□□□□ -0.78
CSNK1D-217ENST00000581241 CNOT1A5YKK6 2376 aaKnown RBP10.16□□□□□ -0.78
CSNK1D-217ENST00000581241 PRLHP81277 87 aa10.16□□□□□ -0.78
CSNK1D-217ENST00000581241 FAM218AQ96MZ4 157 aa10.15□□□□□ -0.78
CSNK1D-217ENST00000581241 Q8N2B8 174 aa10.15□□□□□ -0.78
CSNK1D-217ENST00000581241 NCOR1O75376 2440 aa10.14□□□□□ -0.79
CSNK1D-217ENST00000581241 LINC00315P59091 139 aa10.14□□□□□ -0.79
CSNK1D-217ENST00000581241 IGLV5-45A0A087WSX0 123 aa10.14□□□□□ -0.79
CSNK1D-217ENST00000581241 TP53AIP1Q9HCN2 124 aa10.14□□□□□ -0.79
CSNK1D-217ENST00000581241 PLA2G2AP14555 144 aa10.13□□□□□ -0.79
CSNK1D-217ENST00000581241 LOC110117498A0A087WWA1 95 aa10.13□□□□□ -0.79
CSNK1D-217ENST00000581241 A0A1B0GU69 56 aa10.13□□□□□ -0.79
CSNK1D-217ENST00000581241 Q6ZQT0 140 aa10.13□□□□□ -0.79
CSNK1D-217ENST00000581241 C7orf65Q6ZTY9 151 aa10.13□□□□□ -0.79
CSNK1D-217ENST00000581241 A0A1B0GW54 56 aa10.12□□□□□ -0.79
CSNK1D-217ENST00000581241 CACNA1GO43497 2377 aa10.11□□□□□ -0.79
CSNK1D-217ENST00000581241 SMR3AQ99954 134 aa10.11□□□□□ -0.79
CSNK1D-217ENST00000581241 IGHV3OR16-9A0A0B4J2B5 98 aa10.11□□□□□ -0.79
CSNK1D-217ENST00000581241 ELOF1P60002 83 aaKnown RBP10.11□□□□□ -0.79
CSNK1D-217ENST00000581241 ACYP2P14621 99 aa10.11□□□□□ -0.79
CSNK1D-217ENST00000581241 PCNX1Q96RV3 2341 aa10.09□□□□□ -0.79
CSNK1D-217ENST00000581241 SPAG11AQ6PDA7 123 aa10.09□□□□□ -0.79
CSNK1D-217ENST00000581241 H3BPC8 53 aa10.09□□□□□ -0.79
CSNK1D-217ENST00000581241 KRTAP10-9P60411 292 aa10.08□□□□□ -0.8
CSNK1D-217ENST00000581241 ARHGAP32A7KAX9 2087 aa10.08□□□□□ -0.8
CSNK1D-217ENST00000581241 TECTAO75443 2155 aa10.08□□□□□ -0.8
CSNK1D-217ENST00000581241 C6orf48Q9UBA6 75 aa10.07□□□□□ -0.8
CSNK1D-217ENST00000581241 EXPH5Q8NEV8 1989 aa10.07□□□□□ -0.8
CSNK1D-217ENST00000581241 GPR179Q6PRD1 2367 aa10.07□□□□□ -0.8
CSNK1D-217ENST00000581241 DOPEY2Q9Y3R5 2298 aa10.07□□□□□ -0.8
CSNK1D-217ENST00000581241 A0A1W2PPR1 153 aa10.06□□□□□ -0.8
CSNK1D-217ENST00000581241 SPTBN2O15020 2390 aa10.06□□□□□ -0.8
CSNK1D-217ENST00000581241 SPTAN1Q13813 2472 aaKnown RBP10.05□□□□□ -0.8
CSNK1D-217ENST00000581241 IGKV2D-30A0A075B6S6 120 aa10.05□□□□□ -0.8
CSNK1D-217ENST00000581241 IGKV2-30P06310 120 aa10.05□□□□□ -0.8
CSNK1D-217ENST00000581241 C1orf134Q5TEV5 83 aa10.05□□□□□ -0.8
CSNK1D-217ENST00000581241 LINC00167Q96N53 147 aa10.04□□□□□ -0.8
CSNK1D-217ENST00000581241 TNCP24821 2201 aa10.04□□□□□ -0.8
CSNK1D-217ENST00000581241 SERTAD4-AS1Q5TG53 156 aa10.03□□□□□ -0.8
CSNK1D-217ENST00000581241 GVINP1Q7Z2Y8 2422 aa10.02□□□□□ -0.8
CSNK1D-217ENST00000581241 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.02□□□□□ -0.813e-8■■■■□ 20.1
CSNK1D-217ENST00000581241 TM2D3Q9BRN9 247 aa10.01□□□□□ -0.81
CSNK1D-217ENST00000581241 Q8NBF4 154 aa9.99□□□□□ -0.81
CSNK1D-217ENST00000581241 LINC00476Q8WZB0 136 aa9.99□□□□□ -0.81
CSNK1D-217ENST00000581241 FHL3Q13643 280 aa9.98□□□□□ -0.81
CSNK1D-217ENST00000581241 MOBPQ13875 183 aa9.98□□□□□ -0.81
CSNK1D-217ENST00000581241 Q6ZRX8 168 aa9.98□□□□□ -0.81
CSNK1D-217ENST00000581241 PLXNB1O43157 2135 aa9.98□□□□□ -0.81
CSNK1D-217ENST00000581241 FSHBP01225 129 aa9.97□□□□□ -0.81
CSNK1D-217ENST00000581241 LITAFQ99732 161 aa9.96□□□□□ -0.81
CSNK1D-217ENST00000581241 C8orf87E5RJ46 101 aa9.95□□□□□ -0.82
CSNK1D-217ENST00000581241 NOTCH3Q9UM47 2321 aa9.95□□□□□ -0.82
CSNK1D-217ENST00000581241 TRAV22A0A0B4J277 110 aa9.95□□□□□ -0.82
CSNK1D-217ENST00000581241 TET2Q6N021 2002 aaPredicted RBP9.95□□□□□ -0.82
CSNK1D-217ENST00000581241 H3BNG1 76 aa9.94□□□□□ -0.82
CSNK1D-217ENST00000581241 PRR14LQ5THK1 2151 aa9.94□□□□□ -0.82
CSNK1D-217ENST00000581241 ERC2-IT1O76042 136 aa9.94□□□□□ -0.82
CSNK1D-217ENST00000581241 PLCE1Q9P212 2302 aa9.92□□□□□ -0.82
CSNK1D-217ENST00000581241 CACNA1HO95180 2353 aa9.92□□□□□ -0.82
CSNK1D-217ENST00000581241 RPL37AP61513 92 aaKnown RBP9.92□□□□□ -0.82
CSNK1D-217ENST00000581241 ATP11AUNQ6ZP68 121 aa9.91□□□□□ -0.82
CSNK1D-217ENST00000581241 ST20-AS1Q8NBB2 130 aa9.91□□□□□ -0.82
CSNK1D-217ENST00000581241 AGRNO00468 2067 aa9.91□□□□□ -0.82
CSNK1D-217ENST00000581241 LINC00313P59037 77 aa9.9□□□□□ -0.82
CSNK1D-217ENST00000581241 SPACA4Q8TDM5 124 aa9.9□□□□□ -0.82
CSNK1D-217ENST00000581241 MED13LQ71F56 2210 aa9.9□□□□□ -0.82
CSNK1D-217ENST00000581241 PHF5AQ7RTV0 110 aaKnown RBP9.9□□□□□ -0.82
CSNK1D-217ENST00000581241 PRRC2AP48634 2157 aaKnown RBP9.9□□□□□ -0.83
CSNK1D-217ENST00000581241 GVQW2A0A096LPI5 108 aaPredicted RBP9.89□□□□□ -0.83
CSNK1D-217ENST00000581241 TRBV7-4A0A0J9YYF1 115 aa9.89□□□□□ -0.83
CSNK1D-217ENST00000581241 NHLRC4P0CG21 123 aaPredicted RBP9.89□□□□□ -0.83
CSNK1D-217ENST00000581241 EPM2AB3EWF7 344 aa9.88□□□□□ -0.83
CSNK1D-217ENST00000581241 COL27A1Q8IZC6 1860 aaPredicted RBP9.88□□□□□ -0.83
CSNK1D-217ENST00000581241 PTPRBP23467 1997 aa9.88□□□□□ -0.83
CSNK1D-217ENST00000581241 IGLV6-57P01721 117 aa9.88□□□□□ -0.83
CSNK1D-217ENST00000581241 MDFIQ99750 246 aa9.87□□□□□ -0.83
CSNK1D-217ENST00000581241 CYP4F30PQ9H0H9 118 aa9.86□□□□□ -0.83
CSNK1D-217ENST00000581241 C16orf90A8MZG2 172 aa9.86□□□□□ -0.83
CSNK1D-217ENST00000581241 COL4A2P08572 1712 aa9.86□□□□□ -0.83
CSNK1D-217ENST00000581241 LOC101927531A0A1B0GV80 90 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 219 ms