RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 H0YGX0 51 aa2.34□□□□□ -2.03
SMG8-205ENST00000580798 J3QRE1 110 aa2.34□□□□□ -2.03
SMG8-205ENST00000580798 IGKV2D-40P01614 121 aaPredicted RBP2.34□□□□□ -2.03
SMG8-205ENST00000580798 IGLV3-1P01715 115 aa2.34□□□□□ -2.03
SMG8-205ENST00000580798 ARL14EPLP0DKL9 152 aa2.34□□□□□ -2.03
SMG8-205ENST00000580798 NDPQ00604 133 aa2.34□□□□□ -2.03
SMG8-205ENST00000580798 SPRR4Q96PI1 79 aa2.34□□□□□ -2.03
SMG8-205ENST00000580798 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
SMG8-205ENST00000580798 EML5Q05BV3 1969 aa2.34□□□□□ -2.04
SMG8-205ENST00000580798 GTF3C1Q12789 2109 aa2.33□□□□□ -2.04
SMG8-205ENST00000580798 COX6B1P14854 86 aa2.33□□□□□ -2.04
SMG8-205ENST00000580798 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
SMG8-205ENST00000580798 ANAPC11Q9NYG5 84 aa2.33□□□□□ -2.04
SMG8-205ENST00000580798 FREM3P0C091 2139 aa2.33□□□□□ -2.04
SMG8-205ENST00000580798 TRIOBPQ9H2D6 2365 aa2.32□□□□□ -2.04
SMG8-205ENST00000580798 DEPDC5O75140 1603 aa2.32□□□□□ -2.04
SMG8-205ENST00000580798 SCN7AQ01118 1682 aa2.32□□□□□ -2.04
SMG8-205ENST00000580798 NDUFA3O95167 84 aa2.32□□□□□ -2.04
SMG8-205ENST00000580798 PRB2P02812 416 aaPredicted RBP2.32□□□□□ -2.04
SMG8-205ENST00000580798 SPINK7P58062 85 aa2.32□□□□□ -2.04
SMG8-205ENST00000580798 RPL37AP61513 92 aaKnown RBP2.32□□□□□ -2.04
SMG8-205ENST00000580798 DEFB114Q30KQ6 69 aa2.32□□□□□ -2.04
SMG8-205ENST00000580798 DEFB134Q4QY38 66 aa2.32□□□□□ -2.04
SMG8-205ENST00000580798 LINC00322Q6ZN03 302 aaPredicted RBP2.32□□□□□ -2.04
SMG8-205ENST00000580798 ZCCHC13Q8WW36 166 aaKnown RBP2.32□□□□□ -2.04
SMG8-205ENST00000580798 UBR3Q6ZT12 1888 aa2.32□□□□□ -2.04
SMG8-205ENST00000580798 DDX60LQ5H9U9 1706 aaKnown RBP2.31□□□□□ -2.04
SMG8-205ENST00000580798 TIAM2Q8IVF5 1701 aa2.31□□□□□ -2.04
SMG8-205ENST00000580798 PAPPA2Q9BXP8 1791 aa2.31□□□□□ -2.04
SMG8-205ENST00000580798 MYOFQ9NZM1 2061 aa2.31□□□□□ -2.04
SMG8-205ENST00000580798 A0A1W2PNN7 141 aa2.31□□□□□ -2.04
SMG8-205ENST00000580798 IGIPA6NJ69 53 aa2.31□□□□□ -2.04
SMG8-205ENST00000580798 NDUFA4O00483 81 aa2.31□□□□□ -2.04
SMG8-205ENST00000580798 RPL38P63173 70 aaKnown RBP2.31□□□□□ -2.04
SMG8-205ENST00000580798 HAMPP81172 84 aa2.31□□□□□ -2.04
SMG8-205ENST00000580798 FXYD3Q14802 87 aa2.31□□□□□ -2.04
SMG8-205ENST00000580798 DEFB132Q7Z7B7 95 aa2.31□□□□□ -2.04
SMG8-205ENST00000580798 CCL26Q9Y258 94 aa2.31□□□□□ -2.04
SMG8-205ENST00000580798 SLIT1O75093 1534 aa2.31□□□□□ -2.04
SMG8-205ENST00000580798 NRXN2Q9P2S2 1712 aa2.3□□□□□ -2.04
SMG8-205ENST00000580798 MALRD1Q5VYJ5 2156 aa2.29□□□□□ -2.04
SMG8-205ENST00000580798 HEATR1Q9H583 2144 aaKnown RBP2.29□□□□□ -2.04
SMG8-205ENST00000580798 NINQ8N4C6 2090 aa2.29□□□□□ -2.04
SMG8-205ENST00000580798 HEATR5BQ9P2D3 2071 aa2.29□□□□□ -2.04
SMG8-205ENST00000580798 TRGV2A0A075B6R0 118 aa2.29□□□□□ -2.04
SMG8-205ENST00000580798 ANKRD36A6QL64 1941 aa2.29□□□□□ -2.04
SMG8-205ENST00000580798 LY75O60449 1722 aa2.28□□□□□ -2.04
SMG8-205ENST00000580798 LOC110117498A0A087WWA1 95 aa2.28□□□□□ -2.04
SMG8-205ENST00000580798 TRGV1A0A0A0MS02 117 aa2.28□□□□□ -2.04
SMG8-205ENST00000580798 A0A1B0GU69 56 aa2.28□□□□□ -2.04
SMG8-205ENST00000580798 ETDCA0A1B0GVM5 59 aa2.28□□□□□ -2.04
SMG8-205ENST00000580798 MRPL33O75394 65 aaKnown RBP2.28□□□□□ -2.04
SMG8-205ENST00000580798 HRES1P13985 223 aa2.28□□□□□ -2.04
SMG8-205ENST00000580798 MYO7BQ6PIF6 2116 aa2.28□□□□□ -2.04
SMG8-205ENST00000580798 COA5Q86WW8 74 aa2.28□□□□□ -2.04
SMG8-205ENST00000580798 ZNF625Q96I27 306 aaPredicted RBP2.28□□□□□ -2.04
SMG8-205ENST00000580798 PARP4Q9UKK3 1724 aaKnown RBP2.28□□□□□ -2.05
SMG8-205ENST00000580798 E9PCH4 1651 aa2.28□□□□□ -2.05
SMG8-205ENST00000580798 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.27□□□□□ -2.05
SMG8-205ENST00000580798 A0A0G2JQZ4 141 aa2.27□□□□□ -2.05
SMG8-205ENST00000580798 NBDYA0A0U1RRE5 68 aa2.27□□□□□ -2.05
SMG8-205ENST00000580798 IGKV2-29A2NJV5 120 aaPredicted RBP2.27□□□□□ -2.05
SMG8-205ENST00000580798 ACYP2P14621 99 aa2.27□□□□□ -2.05
SMG8-205ENST00000580798 FXYD4P59646 89 aa2.27□□□□□ -2.05
SMG8-205ENST00000580798 C10orf55Q5SWW7 151 aa2.27□□□□□ -2.05
SMG8-205ENST00000580798 C5orf56Q8N8D9 126 aa2.27□□□□□ -2.05
SMG8-205ENST00000580798 DDX60Q8IY21 1712 aaKnown RBP2.27□□□□□ -2.05
SMG8-205ENST00000580798 SHROOM3Q8TF72 1996 aa2.27□□□□□ -2.05
SMG8-205ENST00000580798 SDK2Q58EX2 2172 aa2.26□□□□□ -2.05
SMG8-205ENST00000580798 PI4KAP42356 2102 aa2.26□□□□□ -2.05
SMG8-205ENST00000580798 A0A087WTM6 91 aa2.26□□□□□ -2.05
SMG8-205ENST00000580798 NCR3O14931 201 aa2.26□□□□□ -2.05
SMG8-205ENST00000580798 PIN1P1O15428 100 aa2.26□□□□□ -2.05
SMG8-205ENST00000580798 IGKV4-1P06312 121 aa2.26□□□□□ -2.05
SMG8-205ENST00000580798 COX7BP24311 80 aa2.26□□□□□ -2.05
SMG8-205ENST00000580798 DUOX1Q9NRD9 1551 aa2.26□□□□□ -2.05
SMG8-205ENST00000580798 DIDO1Q9BTC0 2240 aaKnown RBP2.26□□□□□ -2.05
SMG8-205ENST00000580798 ZGRF1Q86YA3 2104 aa2.26□□□□□ -2.05
SMG8-205ENST00000580798 COL4A1P02462 1669 aa2.25□□□□□ -2.05
SMG8-205ENST00000580798 IGLV4-60A0A075B6I1 120 aa2.25□□□□□ -2.05
SMG8-205ENST00000580798 IGLV3-19P01714 112 aa2.25□□□□□ -2.05
SMG8-205ENST00000580798 KCNQ1DNQ9H478 68 aa2.25□□□□□ -2.05
SMG8-205ENST00000580798 MPDZO75970 2070 aa2.25□□□□□ -2.05
SMG8-205ENST00000580798 CABIN1Q9Y6J0 2220 aa2.25□□□□□ -2.05
SMG8-205ENST00000580798 BCORQ6W2J9 1755 aa2.24□□□□□ -2.05
SMG8-205ENST00000580798 DOT1LQ8TEK3 1739 aa2.24□□□□□ -2.05
SMG8-205ENST00000580798 TNRC6BQ9UPQ9 1833 aaKnown RBP2.24□□□□□ -2.05
SMG8-205ENST00000580798 SPTBP11277 2137 aa2.23□□□□□ -2.05
SMG8-205ENST00000580798 H3BRN7 92 aa2.23□□□□□ -2.05
SMG8-205ENST00000580798 Q96NJ1 140 aa2.23□□□□□ -2.05
SMG8-205ENST00000580798 LINC00472Q9H8W2 130 aa2.23□□□□□ -2.05
SMG8-205ENST00000580798 MYO7AQ13402 2215 aa2.23□□□□□ -2.05
SMG8-205ENST00000580798 PCDH15Q96QU1 1955 aa2.23□□□□□ -2.05
SMG8-205ENST00000580798 NUP214P35658 2090 aaPredicted RBP2.22□□□□□ -2.05
SMG8-205ENST00000580798 LMO7Q8WWI1 1683 aa2.22□□□□□ -2.05
SMG8-205ENST00000580798 LINC00959A0A1B0GUT2 108 aa2.22□□□□□ -2.05
SMG8-205ENST00000580798 INE1O15225 51 aa2.22□□□□□ -2.05
SMG8-205ENST00000580798 IGLV6-57P01721 117 aa2.22□□□□□ -2.05
SMG8-205ENST00000580798 Q6ZQY7 126 aa2.22□□□□□ -2.05
SMG8-205ENST00000580798 DLEC1Q9Y238 1755 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms