RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 MRPS36P82909 103 aaKnown RBP7.36□□□□□ -1.23
CSNK1D-213ENST00000580446 SPANXA1Q9NS26 97 aa7.36□□□□□ -1.23
CSNK1D-213ENST00000580446 GNG13Q9P2W3 67 aa7.36□□□□□ -1.23
CSNK1D-213ENST00000580446 F8VRH5 84 aa7.35□□□□□ -1.23
CSNK1D-213ENST00000580446 K7EN84 100 aa7.35□□□□□ -1.23
CSNK1D-213ENST00000580446 MBD3L1Q8WWY6 194 aa7.35□□□□□ -1.23
CSNK1D-213ENST00000580446 GNB1LQ9BYB4 327 aa7.35□□□□□ -1.23
CSNK1D-213ENST00000580446 FXYD6-FXYD2A0A087WZ82 144 aa7.34□□□□□ -1.23
CSNK1D-213ENST00000580446 Q8IZM0 81 aa7.34□□□□□ -1.23
CSNK1D-213ENST00000580446 LINC00846Q9NV44 126 aa7.34□□□□□ -1.23
CSNK1D-213ENST00000580446 RPS29P62273 56 aaKnown RBP7.33□□□□□ -1.24
CSNK1D-213ENST00000580446 MUC12Q9UKN1 5478 aa7.33□□□□□ -1.24
CSNK1D-213ENST00000580446 TCAPO15273 167 aa7.32□□□□□ -1.24
CSNK1D-213ENST00000580446 Q6ZN92 141 aa7.32□□□□□ -1.24
CSNK1D-213ENST00000580446 TMEM191AQ9H0A3 160 aa7.32□□□□□ -1.24
CSNK1D-213ENST00000580446 ZNF706Q9Y5V0 76 aaPredicted RBP7.32□□□□□ -1.24
CSNK1D-213ENST00000580446 IGLV4-3A0A075B6K6 122 aa7.31□□□□□ -1.24
CSNK1D-213ENST00000580446 FAM231DQ6ZW35 169 aa7.31□□□□□ -1.24
CSNK1D-213ENST00000580446 MED9Q9NWA0 146 aa7.31□□□□□ -1.24
CSNK1D-213ENST00000580446 IGLV6-57P01721 117 aa7.3□□□□□ -1.24
CSNK1D-213ENST00000580446 GAGE2AQ6NT46 116 aa7.3□□□□□ -1.24
CSNK1D-213ENST00000580446 SMIM12Q96EX1 92 aa7.3□□□□□ -1.24
CSNK1D-213ENST00000580446 TIMM17AQ99595 171 aa7.3□□□□□ -1.24
CSNK1D-213ENST00000580446 KRTAP10-10P60014 251 aa7.29□□□□□ -1.24
CSNK1D-213ENST00000580446 IFITM3Q01628 133 aa7.29□□□□□ -1.24
CSNK1D-213ENST00000580446 LINC01561Q8N1V8 128 aa7.29□□□□□ -1.24
CSNK1D-213ENST00000580446 Q8NDZ9 215 aa7.29□□□□□ -1.24
CSNK1D-213ENST00000580446 BIN3Q9NQY0 253 aa7.29□□□□□ -1.24
CSNK1D-213ENST00000580446 H2AFB1P0C5Y9 115 aa7.28□□□□□ -1.24
CSNK1D-213ENST00000580446 OCC1Q8TAD7 63 aa7.28□□□□□ -1.24
CSNK1D-213ENST00000580446 GATCO43716 136 aaKnown RBP7.27□□□□□ -1.25
CSNK1D-213ENST00000580446 VPREB1P12018 145 aa7.27□□□□□ -1.25
CSNK1D-213ENST00000580446 RPL37P61927 97 aaKnown RBP7.27□□□□□ -1.25
CSNK1D-213ENST00000580446 SMCR5Q8TEV8 140 aa7.27□□□□□ -1.25
CSNK1D-213ENST00000580446 BORCS7Q96B45 105 aa7.27□□□□□ -1.25
CSNK1D-213ENST00000580446 IFI27P40305 119 aaPredicted RBP7.26□□□□□ -1.25
CSNK1D-213ENST00000580446 MANBALQ9NQG1 85 aa7.26□□□□□ -1.25
CSNK1D-213ENST00000580446 A0A1B0GUT8 65 aa7.25□□□□□ -1.25
CSNK1D-213ENST00000580446 MRPL51Q4U2R6 128 aaKnown RBP7.25□□□□□ -1.25
CSNK1D-213ENST00000580446 TMEM141Q96I45 108 aa7.25□□□□□ -1.25
CSNK1D-213ENST00000580446 CDKN2A-AS1Q9UH64 79 aa7.25□□□□□ -1.25
CSNK1D-213ENST00000580446 PPP1R2P9O14990 202 aa7.24□□□□□ -1.25
CSNK1D-213ENST00000580446 NPSP0C0P6 89 aa7.24□□□□□ -1.25
CSNK1D-213ENST00000580446 RAB14P61106 215 aa7.24□□□□□ -1.25
CSNK1D-213ENST00000580446 LINC00483Q53H64 154 aa7.24□□□□□ -1.25
CSNK1D-213ENST00000580446 TEX43Q6ZNM6 134 aa7.24□□□□□ -1.25
CSNK1D-213ENST00000580446 SMIM2Q9BVW6 85 aa7.24□□□□□ -1.25
CSNK1D-213ENST00000580446 EIF5A2Q9GZV4 153 aaKnown RBP7.24□□□□□ -1.25
CSNK1D-213ENST00000580446 HIGD1CA8MV81 97 aa7.23□□□□□ -1.25
CSNK1D-213ENST00000580446 HRCT1Q6UXD1 115 aa7.23□□□□□ -1.25
CSNK1D-213ENST00000580446 SSBP3-AS1Q7Z2R9 100 aa7.23□□□□□ -1.25
CSNK1D-213ENST00000580446 AKAP14Q86UN6 197 aa7.23□□□□□ -1.25
CSNK1D-213ENST00000580446 GEMIN7Q9H840 131 aaKnown RBP7.23□□□□□ -1.25
CSNK1D-213ENST00000580446 CHTOPQ9Y3Y2 248 aaKnown RBP7.23□□□□□ -1.25
CSNK1D-213ENST00000580446 A8MWL6 223 aa7.22□□□□□ -1.25
CSNK1D-213ENST00000580446 ARPC5O15511 151 aa7.22□□□□□ -1.25
CSNK1D-213ENST00000580446 PPP1R17O96001 155 aa7.22□□□□□ -1.25
CSNK1D-213ENST00000580446 LINC01551Q86U37 167 aa7.22□□□□□ -1.25
CSNK1D-213ENST00000580446 PFN2P35080 140 aa7.21□□□□□ -1.26
CSNK1D-213ENST00000580446 C9orf153Q5TBE3 101 aa7.21□□□□□ -1.26
CSNK1D-213ENST00000580446 FAM19A3Q7Z5A8 133 aa7.21□□□□□ -1.26
CSNK1D-213ENST00000580446 C2orf88Q9BSF0 95 aa7.21□□□□□ -1.26
CSNK1D-213ENST00000580446 C20orf78Q9BR46 151 aa7.2□□□□□ -1.26
CSNK1D-213ENST00000580446 PDE6DO43924 150 aa7.19□□□□□ -1.26
CSNK1D-213ENST00000580446 ERC2-IT1O76042 136 aa7.19□□□□□ -1.26
CSNK1D-213ENST00000580446 CXCL5P42830 114 aa7.19□□□□□ -1.26
CSNK1D-213ENST00000580446 COX7B2Q8TF08 81 aa7.19□□□□□ -1.26
CSNK1D-213ENST00000580446 UMAD1C9J7I0 102 aa7.18□□□□□ -1.26
CSNK1D-213ENST00000580446 NPYP01303 97 aa7.18□□□□□ -1.26
CSNK1D-213ENST00000580446 LGALS3P17931 250 aaKnown RBP7.18□□□□□ -1.26
CSNK1D-213ENST00000580446 SND1-IT1Q9HBX3 110 aa7.18□□□□□ -1.26
CSNK1D-213ENST00000580446 PYGO1Q9Y3Y4 419 aa7.18□□□□□ -1.26
CSNK1D-213ENST00000580446 SMIM1B2RUZ4 78 aa7.17□□□□□ -1.26
CSNK1D-213ENST00000580446 CKS2P33552 79 aa7.17□□□□□ -1.26
CSNK1D-213ENST00000580446 KIAA1644Q3SXP7 199 aa7.16□□□□□ -1.26
CSNK1D-213ENST00000580446 FAM104BQ5XKR9 115 aa7.16□□□□□ -1.26
CSNK1D-213ENST00000580446 TRBV24-1A0A075B6N3 115 aa7.15□□□□□ -1.26
CSNK1D-213ENST00000580446 LOC389332A0A1B0GUA5 103 aa7.15□□□□□ -1.26
CSNK1D-213ENST00000580446 AMELXQ99217 191 aa7.15□□□□□ -1.26
CSNK1D-213ENST00000580446 VCX2Q9H322 139 aa7.15□□□□□ -1.26
CSNK1D-213ENST00000580446 D6R8Y8 96 aa7.14□□□□□ -1.27
CSNK1D-213ENST00000580446 SMLR1H3BR10 107 aa7.14□□□□□ -1.27
CSNK1D-213ENST00000580446 RIGQ13278 110 aa7.14□□□□□ -1.27
CSNK1D-213ENST00000580446 C2orf66Q6UXQ4 117 aa7.14□□□□□ -1.27
CSNK1D-213ENST00000580446 BATF3Q9NR55 127 aa7.14□□□□□ -1.27
CSNK1D-213ENST00000580446 SPINK8P0C7L1 97 aa7.13□□□□□ -1.27
CSNK1D-213ENST00000580446 RAB5AP20339 215 aa7.13□□□□□ -1.27
CSNK1D-213ENST00000580446 RPL24P83731 157 aaKnown RBP7.13□□□□□ -1.27
CSNK1D-213ENST00000580446 HERVK_113P63121 156 aa7.12□□□□□ -1.27
CSNK1D-213ENST00000580446 CT83Q5H943 113 aa7.12□□□□□ -1.27
CSNK1D-213ENST00000580446 ETDCA0A1B0GVM5 59 aa7.09□□□□□ -1.27
CSNK1D-213ENST00000580446 CEBPGP53567 150 aa7.09□□□□□ -1.27
CSNK1D-213ENST00000580446 LIMD2Q9BT23 127 aa7.09□□□□□ -1.27
CSNK1D-213ENST00000580446 NDUFA13Q9P0J0 144 aa7.09□□□□□ -1.27
CSNK1D-213ENST00000580446 KMT2DO14686 5537 aa7.08□□□□□ -1.28
CSNK1D-213ENST00000580446 C20orf202A1L168 122 aa7.08□□□□□ -1.28
CSNK1D-213ENST00000580446 LINC00862A6NCI5 91 aa7.08□□□□□ -1.28
CSNK1D-213ENST00000580446 H7C2G1 150 aa7.08□□□□□ -1.28
CSNK1D-213ENST00000580446 ATP5LO75964 103 aa7.08□□□□□ -1.28
CSNK1D-213ENST00000580446 PDZD11Q5EBL8 140 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms