RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 PLNP26678 52 aa5.84□□□□□ -1.47
SMARCD2-208ENST00000580054 HERVK_113P63121 156 aa5.84□□□□□ -1.47
SMARCD2-208ENST00000580054 OPRPNQ99935 248 aaPredicted RBP5.84□□□□□ -1.47
SMARCD2-208ENST00000580054 IGLV10-54A0A075B6I4 117 aa5.83□□□□□ -1.48
SMARCD2-208ENST00000580054 IGHV3-64A0A075B6Q5 118 aa5.83□□□□□ -1.48
SMARCD2-208ENST00000580054 LINC00959A0A1B0GUT2 108 aa5.83□□□□□ -1.48
SMARCD2-208ENST00000580054 HSBP1L1C9JCN9 74 aa5.83□□□□□ -1.48
SMARCD2-208ENST00000580054 H3BRM9 83 aa5.83□□□□□ -1.48
SMARCD2-208ENST00000580054 DPM2O94777 84 aa5.83□□□□□ -1.48
SMARCD2-208ENST00000580054 CNBPP62633 177 aaKnown RBP5.83□□□□□ -1.48
SMARCD2-208ENST00000580054 RNASE13Q5GAN3 156 aaKnown RBP5.83□□□□□ -1.48
SMARCD2-208ENST00000580054 LINC00173Q6ZV60 143 aa5.83□□□□□ -1.48
SMARCD2-208ENST00000580054 DPH3Q96FX2 82 aa5.83□□□□□ -1.48
SMARCD2-208ENST00000580054 TINCRA0A1B0GVN0 87 aa5.82□□□□□ -1.48
SMARCD2-208ENST00000580054 IGKCP01834 107 aa5.82□□□□□ -1.48
SMARCD2-208ENST00000580054 UBE2D1P51668 147 aa5.82□□□□□ -1.48
SMARCD2-208ENST00000580054 HERVK_113P61574 105 aa5.82□□□□□ -1.48
SMARCD2-208ENST00000580054 PRR3P79522 188 aaKnown RBP5.82□□□□□ -1.48
SMARCD2-208ENST00000580054 LINC01545Q5VT33 79 aa5.82□□□□□ -1.48
SMARCD2-208ENST00000580054 SPACA4Q8TDM5 124 aa5.82□□□□□ -1.48
SMARCD2-208ENST00000580054 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.81□□□□□ -1.48
SMARCD2-208ENST00000580054 APOMO95445 188 aa5.81□□□□□ -1.48
SMARCD2-208ENST00000580054 IGLC3P0DOY3 106 aa5.81□□□□□ -1.48
SMARCD2-208ENST00000580054 TMEM170BQ5T4T1 132 aa5.81□□□□□ -1.48
SMARCD2-208ENST00000580054 CHCHD10Q8WYQ3 142 aaPredicted RBP5.81□□□□□ -1.48
SMARCD2-208ENST00000580054 MRPL35Q9NZE8 188 aaKnown RBP5.81□□□□□ -1.48
SMARCD2-208ENST00000580054 SLPIP03973 132 aa5.8□□□□□ -1.48
SMARCD2-208ENST00000580054 MALP21145 153 aa5.8□□□□□ -1.48
SMARCD2-208ENST00000580054 JOSD1Q15040 202 aaPredicted RBP5.8□□□□□ -1.48
SMARCD2-208ENST00000580054 LCE2AQ5TA79 106 aaPredicted RBP5.8□□□□□ -1.48
SMARCD2-208ENST00000580054 ZC2HC1BQ5TFG8 222 aa5.8□□□□□ -1.48
SMARCD2-208ENST00000580054 CFAP161Q6P656 301 aa5.8□□□□□ -1.48
SMARCD2-208ENST00000580054 CD164L2Q6UWJ8 174 aa5.8□□□□□ -1.48
SMARCD2-208ENST00000580054 FAM19A3Q7Z5A8 133 aa5.8□□□□□ -1.48
SMARCD2-208ENST00000580054 LINC00469Q8N7U9 141 aa5.8□□□□□ -1.48
SMARCD2-208ENST00000580054 PLAC8Q9NZF1 115 aa5.8□□□□□ -1.48
SMARCD2-208ENST00000580054 COX7A2LO14548 114 aa5.79□□□□□ -1.48
SMARCD2-208ENST00000580054 XCL1P47992 114 aa5.79□□□□□ -1.48
SMARCD2-208ENST00000580054 S100A12P80511 92 aa5.79□□□□□ -1.48
SMARCD2-208ENST00000580054 LINC00242Q5T6M2 205 aa5.79□□□□□ -1.48
SMARCD2-208ENST00000580054 LINC01561Q8N1V8 128 aa5.79□□□□□ -1.48
SMARCD2-208ENST00000580054 C7orf33Q8WU49 177 aa5.79□□□□□ -1.48
SMARCD2-208ENST00000580054 PMCHL2Q9BQD1 86 aa5.79□□□□□ -1.48
SMARCD2-208ENST00000580054 GAGE12HA6NDE8 117 aa5.78□□□□□ -1.48
SMARCD2-208ENST00000580054 C11orf86A6NJI1 115 aa5.78□□□□□ -1.48
SMARCD2-208ENST00000580054 FAM104AQ969W3 186 aa5.78□□□□□ -1.48
SMARCD2-208ENST00000580054 IGLV4-69A0A075B6H9 119 aa5.77□□□□□ -1.49
SMARCD2-208ENST00000580054 A0A087WZ39 114 aa5.77□□□□□ -1.49
SMARCD2-208ENST00000580054 LOC105371267A0A1B0GV96 52 aa5.77□□□□□ -1.49
SMARCD2-208ENST00000580054 PRSS2P07478 247 aa5.77□□□□□ -1.49
SMARCD2-208ENST00000580054 COX6A2Q02221 97 aa5.77□□□□□ -1.49
SMARCD2-208ENST00000580054 REG3GQ6UW15 175 aa5.77□□□□□ -1.49
SMARCD2-208ENST00000580054 C15orf56Q8N910 161 aa5.77□□□□□ -1.49
SMARCD2-208ENST00000580054 IGLV5-45A0A087WSX0 123 aa5.76□□□□□ -1.49
SMARCD2-208ENST00000580054 IGHV3OR16-9A0A0B4J2B5 98 aa5.76□□□□□ -1.49
SMARCD2-208ENST00000580054 IGHV1-58A0A0C4DH39 117 aa5.76□□□□□ -1.49
SMARCD2-208ENST00000580054 IGKV2-24A0A0C4DH68 120 aa5.76□□□□□ -1.49
SMARCD2-208ENST00000580054 SMIM6P0DI80 62 aa5.76□□□□□ -1.49
SMARCD2-208ENST00000580054 ZNF22P17026 224 aaPredicted RBP5.76□□□□□ -1.49
SMARCD2-208ENST00000580054 MAJINQ3KP22 176 aa5.76□□□□□ -1.49
SMARCD2-208ENST00000580054 HIGD2BQ4VC39 106 aa5.76□□□□□ -1.49
SMARCD2-208ENST00000580054 SPINK6Q6UWN8 80 aa5.76□□□□□ -1.49
SMARCD2-208ENST00000580054 C5orf38Q86SI9 138 aa5.76□□□□□ -1.49
SMARCD2-208ENST00000580054 PLEKHB2Q96CS7 222 aa5.76□□□□□ -1.49
SMARCD2-208ENST00000580054 VAMP8Q9BV40 100 aa5.76□□□□□ -1.49
SMARCD2-208ENST00000580054 CDKN2A-AS1Q9UH64 79 aa5.76□□□□□ -1.49
SMARCD2-208ENST00000580054 A0A0U1RQV1 116 aa5.75□□□□□ -1.49
SMARCD2-208ENST00000580054 FOXI1Q12951 378 aa5.75□□□□□ -1.49
SMARCD2-208ENST00000580054 PYY3Q5JQD4 70 aa5.75□□□□□ -1.49
SMARCD2-208ENST00000580054 SFTA2Q6UW10 78 aa5.75□□□□□ -1.49
SMARCD2-208ENST00000580054 ATOH7Q8N100 152 aa5.75□□□□□ -1.49
SMARCD2-208ENST00000580054 STPG4Q8N801 248 aa5.75□□□□□ -1.49
SMARCD2-208ENST00000580054 TMEM223A0PJW6 202 aa5.74□□□□□ -1.49
SMARCD2-208ENST00000580054 ZNF561-AS1K7EIQ3 104 aa5.74□□□□□ -1.49
SMARCD2-208ENST00000580054 LGALS3P17931 250 aaKnown RBP5.74□□□□□ -1.49
SMARCD2-208ENST00000580054 C6orf226Q5I0X4 101 aa5.74□□□□□ -1.49
SMARCD2-208ENST00000580054 A0A096LNI7 61 aa5.73□□□□□ -1.49
SMARCD2-208ENST00000580054 E9PLD3 99 aa5.73□□□□□ -1.49
SMARCD2-208ENST00000580054 F8WDY8 70 aa5.73□□□□□ -1.49
SMARCD2-208ENST00000580054 LEPROTO15243 131 aa5.73□□□□□ -1.49
SMARCD2-208ENST00000580054 SPINK8P0C7L1 97 aa5.73□□□□□ -1.49
SMARCD2-208ENST00000580054 CXCL5P42830 114 aa5.73□□□□□ -1.49
SMARCD2-208ENST00000580054 CKS1BP61024 79 aa5.73□□□□□ -1.49
SMARCD2-208ENST00000580054 SRSF9Q13242 221 aaKnown RBP eCLIP5.73□□□□□ -1.49
SMARCD2-208ENST00000580054 ORAOV1Q8WV07 137 aa5.73□□□□□ -1.49
SMARCD2-208ENST00000580054 TOMM7Q9P0U1 55 aa5.73□□□□□ -1.49
SMARCD2-208ENST00000580054 LINC00587B1AMM8 73 aa5.72□□□□□ -1.49
SMARCD2-208ENST00000580054 SMIM1B2RUZ4 78 aa5.72□□□□□ -1.49
SMARCD2-208ENST00000580054 NMUP48645 174 aa5.72□□□□□ -1.49
SMARCD2-208ENST00000580054 Q8IZM0 81 aa5.72□□□□□ -1.49
SMARCD2-208ENST00000580054 COX7B2Q8TF08 81 aa5.72□□□□□ -1.49
SMARCD2-208ENST00000580054 PAM16Q9Y3D7 125 aa5.72□□□□□ -1.49
SMARCD2-208ENST00000580054 GVQW2A0A096LPI5 108 aaPredicted RBP5.71□□□□□ -1.5
SMARCD2-208ENST00000580054 MYMXA0A1B0GTQ4 84 aa5.71□□□□□ -1.5
SMARCD2-208ENST00000580054 J3QQQ9 107 aa5.71□□□□□ -1.5
SMARCD2-208ENST00000580054 HERV-K104P63124 156 aa5.71□□□□□ -1.5
SMARCD2-208ENST00000580054 SPAG11BQ08648 103 aa5.71□□□□□ -1.5
SMARCD2-208ENST00000580054 SPATA45Q537H7 98 aa5.71□□□□□ -1.5
SMARCD2-208ENST00000580054 IGLV5-39A0A0G2JS06 123 aa5.7□□□□□ -1.5
SMARCD2-208ENST00000580054 C2orf48Q96LS8 159 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms