RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 CHTOPQ9Y3Y2 248 aaKnown RBP4.71□□□□□ -1.66
RNF43-204ENST00000580014 IGLV10-54A0A075B6I4 117 aa4.7□□□□□ -1.66
RNF43-204ENST00000580014 IGKV2D-24A0A075B6R9 120 aa4.7□□□□□ -1.66
RNF43-204ENST00000580014 IGKV3OR2-268A0A0C4DH90 116 aa4.7□□□□□ -1.66
RNF43-204ENST00000580014 LRCOL1A6NCL2 159 aa4.7□□□□□ -1.66
RNF43-204ENST00000580014 C11orf86A6NJI1 115 aa4.7□□□□□ -1.66
RNF43-204ENST00000580014 XCL1P47992 114 aa4.7□□□□□ -1.66
RNF43-204ENST00000580014 COX7A2LO14548 114 aa4.69□□□□□ -1.66
RNF43-204ENST00000580014 ZNF22P17026 224 aaPredicted RBP4.69□□□□□ -1.66
RNF43-204ENST00000580014 AKR1D1P51857 326 aa4.69□□□□□ -1.66
RNF43-204ENST00000580014 LYSTQ99698 3801 aa4.69□□□□□ -1.66
RNF43-204ENST00000580014 CHAC1Q9BUX1 264 aa4.69□□□□□ -1.66
RNF43-204ENST00000580014 CDKN2A-AS1Q9UH64 79 aa4.69□□□□□ -1.66
RNF43-204ENST00000580014 IGHV3-64A0A075B6Q5 118 aa4.68□□□□□ -1.66
RNF43-204ENST00000580014 GVQW2A0A096LPI5 108 aaPredicted RBP4.68□□□□□ -1.66
RNF43-204ENST00000580014 DPM2O94777 84 aa4.68□□□□□ -1.66
RNF43-204ENST00000580014 PLNP26678 52 aa4.68□□□□□ -1.66
RNF43-204ENST00000580014 KRTDAPP60985 99 aa4.68□□□□□ -1.66
RNF43-204ENST00000580014 C5orf38Q86SI9 138 aa4.68□□□□□ -1.66
RNF43-204ENST00000580014 OR10D4PQ8NGN7 298 aa4.68□□□□□ -1.66
RNF43-204ENST00000580014 GEMIN7Q9H840 131 aaKnown RBP4.68□□□□□ -1.66
RNF43-204ENST00000580014 SACSQ9NZJ4 4579 aa4.67□□□□□ -1.66
RNF43-204ENST00000580014 KMT2AQ03164 3969 aa4.67□□□□□ -1.66
RNF43-204ENST00000580014 A0A087WTM6 91 aa4.67□□□□□ -1.66
RNF43-204ENST00000580014 IGHV1-58A0A0C4DH39 117 aa4.67□□□□□ -1.66
RNF43-204ENST00000580014 TMEM223A0PJW6 202 aa4.67□□□□□ -1.66
RNF43-204ENST00000580014 C20orf202A1L168 122 aa4.67□□□□□ -1.66
RNF43-204ENST00000580014 SMIM1B2RUZ4 78 aa4.67□□□□□ -1.66
RNF43-204ENST00000580014 F8WDY8 70 aa4.67□□□□□ -1.66
RNF43-204ENST00000580014 H3BRM9 83 aa4.67□□□□□ -1.66
RNF43-204ENST00000580014 IGKCP01834 107 aa4.67□□□□□ -1.66
RNF43-204ENST00000580014 WFDC2Q14508 124 aa4.67□□□□□ -1.66
RNF43-204ENST00000580014 KIAA0087Q14695 138 aa4.67□□□□□ -1.66
RNF43-204ENST00000580014 LINC00336Q6ZUF6 198 aa4.67□□□□□ -1.66
RNF43-204ENST00000580014 LINC00469Q8N7U9 141 aa4.67□□□□□ -1.66
RNF43-204ENST00000580014 C15orf56Q8N910 161 aa4.67□□□□□ -1.66
RNF43-204ENST00000580014 PSCAO43653 123 aa4.66□□□□□ -1.66
RNF43-204ENST00000580014 IGKV2-30P06310 120 aa4.66□□□□□ -1.66
RNF43-204ENST00000580014 JOSD1Q15040 202 aaPredicted RBP4.66□□□□□ -1.66
RNF43-204ENST00000580014 C14orf177Q52M58 125 aa4.66□□□□□ -1.66
RNF43-204ENST00000580014 PMCHL2Q9BQD1 86 aa4.66□□□□□ -1.66
RNF43-204ENST00000580014 RYR2Q92736 4967 aa4.65□□□□□ -1.66
RNF43-204ENST00000580014 H0Y8G0 127 aa4.65□□□□□ -1.67
RNF43-204ENST00000580014 APOMO95445 188 aa4.65□□□□□ -1.67
RNF43-204ENST00000580014 CNBPP62633 177 aaKnown RBP4.65□□□□□ -1.67
RNF43-204ENST00000580014 TMEM170BQ5T4T1 132 aa4.65□□□□□ -1.67
RNF43-204ENST00000580014 Q8IZM0 81 aa4.65□□□□□ -1.67
RNF43-204ENST00000580014 C2orf48Q96LS8 159 aa4.65□□□□□ -1.67
RNF43-204ENST00000580014 LOC105371267A0A1B0GV96 52 aa4.64□□□□□ -1.67
RNF43-204ENST00000580014 A0A1B0GVY2 172 aa4.64□□□□□ -1.67
RNF43-204ENST00000580014 E9PLD3 99 aa4.64□□□□□ -1.67
RNF43-204ENST00000580014 SPINK8P0C7L1 97 aa4.64□□□□□ -1.67
RNF43-204ENST00000580014 Q8N814 137 aa4.64□□□□□ -1.67
RNF43-204ENST00000580014 HYDINQ4G0P3 5121 aa4.64□□□□□ -1.67
RNF43-204ENST00000580014 KMT2CQ8NEZ4 4911 aaKnown RBP4.64□□□□□ -1.67
RNF43-204ENST00000580014 DNAH2Q9P225 4427 aa4.63□□□□□ -1.67
RNF43-204ENST00000580014 DNAH17Q9UFH2 4485 aa4.63□□□□□ -1.67
RNF43-204ENST00000580014 LEPROTO15243 131 aa4.63□□□□□ -1.67
RNF43-204ENST00000580014 SPAG11BQ08648 103 aa4.63□□□□□ -1.67
RNF43-204ENST00000580014 PYY3Q5JQD4 70 aa4.63□□□□□ -1.67
RNF43-204ENST00000580014 STPG4Q8N801 248 aa4.63□□□□□ -1.67
RNF43-204ENST00000580014 COX7B2Q8TF08 81 aa4.63□□□□□ -1.67
RNF43-204ENST00000580014 ORAOV1Q8WV07 137 aa4.63□□□□□ -1.67
RNF43-204ENST00000580014 ZNF625Q96I27 306 aaPredicted RBP4.63□□□□□ -1.67
RNF43-204ENST00000580014 LECT2O14960 151 aa4.62□□□□□ -1.67
RNF43-204ENST00000580014 CXCL5P42830 114 aa4.62□□□□□ -1.67
RNF43-204ENST00000580014 HERVK_113P61574 105 aa4.62□□□□□ -1.67
RNF43-204ENST00000580014 PLEKHB2Q96CS7 222 aa4.62□□□□□ -1.67
RNF43-204ENST00000580014 DNAH10Q8IVF4 4471 aa4.61□□□□□ -1.67
RNF43-204ENST00000580014 IGKV2D-26A0A0A0MRZ7 120 aa4.61□□□□□ -1.67
RNF43-204ENST00000580014 J3QQQ9 107 aa4.61□□□□□ -1.67
RNF43-204ENST00000580014 NMUP48645 174 aa4.61□□□□□ -1.67
RNF43-204ENST00000580014 TSPEAR-AS2P59090 65 aa4.61□□□□□ -1.67
RNF43-204ENST00000580014 RPL24P83731 157 aaKnown RBP4.61□□□□□ -1.67
RNF43-204ENST00000580014 SYCNQ0VAF6 134 aa4.61□□□□□ -1.67
RNF43-204ENST00000580014 HIGD2BQ4VC39 106 aa4.61□□□□□ -1.67
RNF43-204ENST00000580014 C6orf226Q5I0X4 101 aa4.61□□□□□ -1.67
RNF43-204ENST00000580014 SFTA2Q6UW10 78 aa4.61□□□□□ -1.67
RNF43-204ENST00000580014 ATOH7Q8N100 152 aa4.61□□□□□ -1.67
RNF43-204ENST00000580014 C9orf163Q8N9P6 203 aa4.61□□□□□ -1.67
RNF43-204ENST00000580014 TRBV30A0A0K0K1B3 111 aa4.6□□□□□ -1.67
RNF43-204ENST00000580014 NDUFA1O15239 70 aa4.6□□□□□ -1.67
RNF43-204ENST00000580014 MAJINQ3KP22 176 aa4.6□□□□□ -1.67
RNF43-204ENST00000580014 C2orf82Q6UX34 121 aa4.6□□□□□ -1.67
RNF43-204ENST00000580014 UNQ6190/PRO20217Q6UXQ8 127 aa4.6□□□□□ -1.67
RNF43-204ENST00000580014 Q6ZRU5 148 aa4.6□□□□□ -1.67
RNF43-204ENST00000580014 LINC00526Q96FQ7 95 aa4.6□□□□□ -1.67
RNF43-204ENST00000580014 FAT2Q9NYQ8 4349 aa4.59□□□□□ -1.67
RNF43-204ENST00000580014 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.59□□□□□ -1.67
RNF43-204ENST00000580014 TLX1NBP0CAT3 122 aa4.59□□□□□ -1.67
RNF43-204ENST00000580014 CKS1BP61024 79 aa4.59□□□□□ -1.67
RNF43-204ENST00000580014 HERV-K104P63124 156 aa4.59□□□□□ -1.67
RNF43-204ENST00000580014 SDIM1Q6ZPB5 146 aa4.59□□□□□ -1.67
RNF43-204ENST00000580014 CARD19Q96LW7 228 aa4.59□□□□□ -1.67
RNF43-204ENST00000580014 CAMK2N2Q96S95 79 aa4.59□□□□□ -1.67
RNF43-204ENST00000580014 TOMM7Q9P0U1 55 aa4.59□□□□□ -1.67
RNF43-204ENST00000580014 C6orf48Q9UBA6 75 aa4.59□□□□□ -1.67
RNF43-204ENST00000580014 NDUFA12Q9UI09 145 aa4.59□□□□□ -1.67
RNF43-204ENST00000580014 FRAS1Q86XX4 4008 aa4.58□□□□□ -1.68
RNF43-204ENST00000580014 MYMXA0A1B0GTQ4 84 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms