RNA–Protein interactions for RNA: ENST00000579589.1

RAB11FIP4-204, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 4

Gene RAB11FIP4, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-204ENST00000579589 C2orf82Q6UX34 121 aa12.49□□□□□ -0.41
RAB11FIP4-204ENST00000579589 Q8IZM0 81 aa12.49□□□□□ -0.41
RAB11FIP4-204ENST00000579589 TOMM7Q9P0U1 55 aa12.49□□□□□ -0.41
RAB11FIP4-204ENST00000579589 IGLV5-45A0A087WSX0 123 aa12.48□□□□□ -0.41
RAB11FIP4-204ENST00000579589 PMCHL1Q16048 86 aa12.48□□□□□ -0.41
RAB11FIP4-204ENST00000579589 C6orf226Q5I0X4 101 aa12.48□□□□□ -0.41
RAB11FIP4-204ENST00000579589 CKS1BP61024 79 aa12.47□□□□□ -0.41
RAB11FIP4-204ENST00000579589 PDZD11Q5EBL8 140 aa12.47□□□□□ -0.41
RAB11FIP4-204ENST00000579589 CHCHD1Q96BP2 118 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP4-204ENST00000579589 ATP5LO75964 103 aa12.46□□□□□ -0.41
RAB11FIP4-204ENST00000579589 SMIM1B2RUZ4 78 aa12.45□□□□□ -0.42
RAB11FIP4-204ENST00000579589 Q6ZRP5 223 aa12.45□□□□□ -0.42
RAB11FIP4-204ENST00000579589 A0A1W2PNN7 141 aa12.44□□□□□ -0.42
RAB11FIP4-204ENST00000579589 TRGC2P03986 189 aa12.44□□□□□ -0.42
RAB11FIP4-204ENST00000579589 NDUFA6P56556 154 aa12.44□□□□□ -0.42
RAB11FIP4-204ENST00000579589 C9orf116Q5BN46 136 aaPredicted RBP12.44□□□□□ -0.42
RAB11FIP4-204ENST00000579589 KRTAP29-1A8MX34 341 aaPredicted RBP12.43□□□□□ -0.42
RAB11FIP4-204ENST00000579589 NDUFC2-KCTD14E9PQ53 114 aa12.43□□□□□ -0.42
RAB11FIP4-204ENST00000579589 H3BRM9 83 aa12.43□□□□□ -0.42
RAB11FIP4-204ENST00000579589 IGLC3P0DOY3 106 aa12.43□□□□□ -0.42
RAB11FIP4-204ENST00000579589 CXCL5P42830 114 aa12.43□□□□□ -0.42
RAB11FIP4-204ENST00000579589 BAGE3Q86Y29 109 aa12.42□□□□□ -0.42
RAB11FIP4-204ENST00000579589 F8VRH5 84 aa12.41□□□□□ -0.42
RAB11FIP4-204ENST00000579589 GAGE2EQ4V326 116 aa12.41□□□□□ -0.42
RAB11FIP4-204ENST00000579589 GAGE2DQ9UEU5 116 aa12.41□□□□□ -0.42
RAB11FIP4-204ENST00000579589 HMCN2Q8NDA2 5059 aa12.41□□□□□ -0.42
RAB11FIP4-204ENST00000579589 COLCA2A8K830 154 aa12.4□□□□□ -0.42
RAB11FIP4-204ENST00000579589 PRR3P79522 188 aaKnown RBP12.4□□□□□ -0.42
RAB11FIP4-204ENST00000579589 COX7B2Q8TF08 81 aa12.4□□□□□ -0.42
RAB11FIP4-204ENST00000579589 TNXBP22105 4242 aa12.39□□□□□ -0.43
RAB11FIP4-204ENST00000579589 HSBP1O75506 76 aa12.39□□□□□ -0.43
RAB11FIP4-204ENST00000579589 SPINK8P0C7L1 97 aa12.39□□□□□ -0.43
RAB11FIP4-204ENST00000579589 J3QL48 77 aa12.38□□□□□ -0.43
RAB11FIP4-204ENST00000579589 IFI27L1Q96BM0 104 aa12.37□□□□□ -0.43
RAB11FIP4-204ENST00000579589 OXTP01178 125 aa12.36□□□□□ -0.43
RAB11FIP4-204ENST00000579589 ZNF22P17026 224 aaPredicted RBP12.36□□□□□ -0.43
RAB11FIP4-204ENST00000579589 FAM168BA1KXE4 195 aa12.35□□□□□ -0.43
RAB11FIP4-204ENST00000579589 TRAV12-1A0A0B4J245 112 aa12.34□□□□□ -0.43
RAB11FIP4-204ENST00000579589 IGLV5-39A0A0G2JS06 123 aa12.34□□□□□ -0.43
RAB11FIP4-204ENST00000579589 PHF5AQ7RTV0 110 aaKnown RBP12.34□□□□□ -0.43
RAB11FIP4-204ENST00000579589 FAM19A2Q8N3H0 131 aa12.34□□□□□ -0.43
RAB11FIP4-204ENST00000579589 CHTOPQ9Y3Y2 248 aaKnown RBP12.34□□□□□ -0.43
RAB11FIP4-204ENST00000579589 C11orf86A6NJI1 115 aa12.33□□□□□ -0.44
RAB11FIP4-204ENST00000579589 C9orf129Q5T035 196 aaKnown RBP12.33□□□□□ -0.44
RAB11FIP4-204ENST00000579589 FAM19A5Q7Z5A7 132 aaPredicted RBP12.33□□□□□ -0.44
RAB11FIP4-204ENST00000579589 SERF1AO75920 110 aa12.32□□□□□ -0.44
RAB11FIP4-204ENST00000579589 TMEM170BQ5T4T1 132 aa12.31□□□□□ -0.44
RAB11FIP4-204ENST00000579589 SCO1O75880 301 aa12.3□□□□□ -0.44
RAB11FIP4-204ENST00000579589 MT1HL1P0DM35 61 aa12.3□□□□□ -0.44
RAB11FIP4-204ENST00000579589 LINC00310P59036 64 aa12.3□□□□□ -0.44
RAB11FIP4-204ENST00000579589 KRTAP7-1Q8IUC3 87 aa12.3□□□□□ -0.44
RAB11FIP4-204ENST00000579589 M0QXV9 152 aa12.29□□□□□ -0.44
RAB11FIP4-204ENST00000579589 LEPROTL1O95214 131 aa12.29□□□□□ -0.44
RAB11FIP4-204ENST00000579589 XAGE1AQ9HD64 81 aa12.29□□□□□ -0.44
RAB11FIP4-204ENST00000579589 PSORS1C2Q9UIG4 136 aa12.29□□□□□ -0.44
RAB11FIP4-204ENST00000579589 SFTA2Q6UW10 78 aa12.26□□□□□ -0.45
RAB11FIP4-204ENST00000579589 SPINK6Q6UWN8 80 aa12.26□□□□□ -0.45
RAB11FIP4-204ENST00000579589 NUPR1O60356 82 aa12.25□□□□□ -0.45
RAB11FIP4-204ENST00000579589 HSPB8Q9UJY1 196 aa12.25□□□□□ -0.45
RAB11FIP4-204ENST00000579589 TMEM223A0PJW6 202 aa12.24□□□□□ -0.45
RAB11FIP4-204ENST00000579589 SRSF9Q13242 221 aaKnown RBP eCLIP12.24□□□□□ -0.45
RAB11FIP4-204ENST00000579589 ODF1Q14990 250 aa12.24□□□□□ -0.45
RAB11FIP4-204ENST00000579589 C1orf137Q5JT78 98 aa12.24□□□□□ -0.45
RAB11FIP4-204ENST00000579589 SERTAD4-AS1Q5TG53 156 aa12.24□□□□□ -0.45
RAB11FIP4-204ENST00000579589 UBE2BP63146 152 aa12.23□□□□□ -0.45
RAB11FIP4-204ENST00000579589 H0Y8G0 127 aa12.22□□□□□ -0.45
RAB11FIP4-204ENST00000579589 KRTAP11-1Q8IUC1 163 aa12.22□□□□□ -0.45
RAB11FIP4-204ENST00000579589 C22orf24Q9Y442 160 aa12.22□□□□□ -0.45
RAB11FIP4-204ENST00000579589 HIST1H2BKO60814 126 aa12.21□□□□□ -0.45
RAB11FIP4-204ENST00000579589 HIST1H2BJP06899 126 aa12.21□□□□□ -0.45
RAB11FIP4-204ENST00000579589 FABP4P15090 132 aa12.21□□□□□ -0.45
RAB11FIP4-204ENST00000579589 HIST1H2BOP23527 126 aa12.21□□□□□ -0.45
RAB11FIP4-204ENST00000579589 HIST1H2BBP33778 126 aa12.21□□□□□ -0.45
RAB11FIP4-204ENST00000579589 HIST1H2BDP58876 126 aa12.21□□□□□ -0.45
RAB11FIP4-204ENST00000579589 HIST1H2BCP62807 126 aa12.21□□□□□ -0.45
RAB11FIP4-204ENST00000579589 HIST2H2BEQ16778 126 aa12.21□□□□□ -0.45
RAB11FIP4-204ENST00000579589 LBHQ53QV2 105 aaPredicted RBP12.21□□□□□ -0.45
RAB11FIP4-204ENST00000579589 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.21□□□□□ -0.45
RAB11FIP4-204ENST00000579589 HIST1H2BHQ93079 126 aa12.21□□□□□ -0.45
RAB11FIP4-204ENST00000579589 HIST1H2BNQ99877 126 aa12.21□□□□□ -0.45
RAB11FIP4-204ENST00000579589 HIST1H2BMQ99879 126 aa12.21□□□□□ -0.45
RAB11FIP4-204ENST00000579589 ERG28Q9UKR5 140 aa12.21□□□□□ -0.45
RAB11FIP4-204ENST00000579589 PFN2P35080 140 aa12.2□□□□□ -0.46
RAB11FIP4-204ENST00000579589 COX17Q14061 63 aa12.2□□□□□ -0.46
RAB11FIP4-204ENST00000579589 ZNF625Q96I27 306 aaPredicted RBP12.2□□□□□ -0.46
RAB11FIP4-204ENST00000579589 TP73-AS1Q9UF72 201 aa12.2□□□□□ -0.46
RAB11FIP4-204ENST00000579589 PLA2G2DQ9UNK4 145 aa12.2□□□□□ -0.46
RAB11FIP4-204ENST00000579589 REG3GQ6UW15 175 aa12.19□□□□□ -0.46
RAB11FIP4-204ENST00000579589 IGLV7-43P04211 117 aa12.18□□□□□ -0.46
RAB11FIP4-204ENST00000579589 PLNP26678 52 aa12.17□□□□□ -0.46
RAB11FIP4-204ENST00000579589 MRPL55Q7Z7F7 128 aaKnown RBP12.17□□□□□ -0.46
RAB11FIP4-204ENST00000579589 LINC01600Q96MT4 127 aa12.15□□□□□ -0.46
RAB11FIP4-204ENST00000579589 MAP1LC3CQ9BXW4 147 aa12.15□□□□□ -0.46
RAB11FIP4-204ENST00000579589 SND1-IT1Q9HBX3 110 aa12.15□□□□□ -0.46
RAB11FIP4-204ENST00000579589 IGLV5-37A0A075B6J1 123 aa12.14□□□□□ -0.47
RAB11FIP4-204ENST00000579589 DPM2O94777 84 aa12.14□□□□□ -0.47
RAB11FIP4-204ENST00000579589 NKAPP1Q8N9T2 125 aa12.13□□□□□ -0.47
RAB11FIP4-204ENST00000579589 DIRC1Q969H9 104 aa12.12□□□□□ -0.47
RAB11FIP4-204ENST00000579589 IGKCP01834 107 aa12.11□□□□□ -0.47
RAB11FIP4-204ENST00000579589 LINC00158P58513 81 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms