RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 GVQW2A0A096LPI5 108 aaPredicted RBP9.12□□□□□ -0.95
TSEN54-206ENST00000579449 MYMXA0A1B0GTQ4 84 aa9.12□□□□□ -0.95
TSEN54-206ENST00000579449 ZNF815PA8K554 130 aa9.12□□□□□ -0.95
TSEN54-206ENST00000579449 ZNF561-AS1K7EIQ3 104 aa9.12□□□□□ -0.95
TSEN54-206ENST00000579449 TP73-AS1Q9UF72 201 aa9.12□□□□□ -0.95
TSEN54-206ENST00000579449 SACSQ9NZJ4 4579 aa9.12□□□□□ -0.95
TSEN54-206ENST00000579449 LRCOL1A6NCL2 159 aa9.11□□□□□ -0.95
TSEN54-206ENST00000579449 NDUFA1O15239 70 aa9.11□□□□□ -0.95
TSEN54-206ENST00000579449 SLC25A34Q6PIV7 304 aa9.11□□□□□ -0.95
TSEN54-206ENST00000579449 C2orf82Q6UX34 121 aa9.11□□□□□ -0.95
TSEN54-206ENST00000579449 BOD1L2Q8IYS8 172 aa9.11□□□□□ -0.95
TSEN54-206ENST00000579449 NTN5Q8WTR8 489 aaPredicted RBP9.11□□□□□ -0.95
TSEN54-206ENST00000579449 ZNF625Q96I27 306 aaPredicted RBP9.11□□□□□ -0.95
TSEN54-206ENST00000579449 CXCL5P42830 114 aa9.1□□□□□ -0.95
TSEN54-206ENST00000579449 CKS1BP61024 79 aa9.1□□□□□ -0.95
TSEN54-206ENST00000579449 DLEU1O43261 78 aa9.09□□□□□ -0.95
TSEN54-206ENST00000579449 C14orf177Q52M58 125 aa9.09□□□□□ -0.95
TSEN54-206ENST00000579449 UNQ6190/PRO20217Q6UXQ8 127 aa9.09□□□□□ -0.95
TSEN54-206ENST00000579449 C2orf48Q96LS8 159 aa9.09□□□□□ -0.95
TSEN54-206ENST00000579449 DNAH2Q9P225 4427 aa9.08□□□□□ -0.96
TSEN54-206ENST00000579449 RTL8CO15255 209 aa9.08□□□□□ -0.96
TSEN54-206ENST00000579449 HERV-K104P63124 156 aa9.08□□□□□ -0.96
TSEN54-206ENST00000579449 C10orf25Q5T742 122 aa9.08□□□□□ -0.96
TSEN54-206ENST00000579449 CAMK2N2Q96S95 79 aa9.08□□□□□ -0.96
TSEN54-206ENST00000579449 UQCR10Q9UDW1 63 aa9.08□□□□□ -0.96
TSEN54-206ENST00000579449 A0A087WTM6 91 aa9.07□□□□□ -0.96
TSEN54-206ENST00000579449 A0A0J9YXY3 114 aa9.07□□□□□ -0.96
TSEN54-206ENST00000579449 F8WDY8 70 aa9.07□□□□□ -0.96
TSEN54-206ENST00000579449 SFTA2Q6UW10 78 aa9.07□□□□□ -0.96
TSEN54-206ENST00000579449 FRAS1Q86XX4 4008 aa9.07□□□□□ -0.96
TSEN54-206ENST00000579449 TSTD3H0UI37 97 aa9.06□□□□□ -0.96
TSEN54-206ENST00000579449 SLPIP03973 132 aa9.06□□□□□ -0.96
TSEN54-206ENST00000579449 SYCNQ0VAF6 134 aa9.06□□□□□ -0.96
TSEN54-206ENST00000579449 SCGB1D4Q6XE38 83 aa9.06□□□□□ -0.96
TSEN54-206ENST00000579449 Q6ZRU5 148 aa9.06□□□□□ -0.96
TSEN54-206ENST00000579449 MIEN1Q9BRT3 115 aa9.06□□□□□ -0.96
TSEN54-206ENST00000579449 HYDINQ4G0P3 5121 aa9.06□□□□□ -0.96
TSEN54-206ENST00000579449 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.04□□□□□ -0.96
TSEN54-206ENST00000579449 C9orf116Q5BN46 136 aaPredicted RBP9.04□□□□□ -0.96
TSEN54-206ENST00000579449 MEIG1Q5JSS6 88 aa9.04□□□□□ -0.96
TSEN54-206ENST00000579449 C2orf91Q6ZV80 131 aa9.04□□□□□ -0.96
TSEN54-206ENST00000579449 Q8N814 137 aa9.04□□□□□ -0.96
TSEN54-206ENST00000579449 CARD19Q96LW7 228 aa9.04□□□□□ -0.96
TSEN54-206ENST00000579449 C6orf48Q9UBA6 75 aa9.04□□□□□ -0.96
TSEN54-206ENST00000579449 DNAH17Q9UFH2 4485 aa9.03□□□□□ -0.96
TSEN54-206ENST00000579449 TRBV30A0A0K0K1B3 111 aa9.03□□□□□ -0.96
TSEN54-206ENST00000579449 ERG28Q9UKR5 140 aa9.03□□□□□ -0.96
TSEN54-206ENST00000579449 A0A0U1RRA0 63 aa9.02□□□□□ -0.97
TSEN54-206ENST00000579449 SMIM13P0DJ93 91 aa9.02□□□□□ -0.97
TSEN54-206ENST00000579449 CNBPP62633 177 aaKnown RBP9.02□□□□□ -0.97
TSEN54-206ENST00000579449 HIGD1BQ9P298 99 aa9.02□□□□□ -0.97
TSEN54-206ENST00000579449 LINC00587B1AMM8 73 aa9.01□□□□□ -0.97
TSEN54-206ENST00000579449 TIMM17BO60830 172 aa9.01□□□□□ -0.97
TSEN54-206ENST00000579449 PFN2P35080 140 aa9.01□□□□□ -0.97
TSEN54-206ENST00000579449 HNRNPA3P51991 378 aaKnown RBP9.01□□□□□ -0.97
TSEN54-206ENST00000579449 LINC00158P58513 81 aa9.01□□□□□ -0.97
TSEN54-206ENST00000579449 CIRBPQ14011 172 aaKnown RBP9.01□□□□□ -0.97
TSEN54-206ENST00000579449 RNF151Q2KHN1 245 aa9.01□□□□□ -0.97
TSEN54-206ENST00000579449 LITAFQ99732 161 aa9.01□□□□□ -0.97
TSEN54-206ENST00000579449 ADAMTSL4-AS1Q5T5F5 129 aa9□□□□□ -0.97
TSEN54-206ENST00000579449 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.99□□□□□ -0.97
TSEN54-206ENST00000579449 TMEM238C9JI98 176 aa8.99□□□□□ -0.97
TSEN54-206ENST00000579449 COX17Q14061 63 aa8.99□□□□□ -0.97
TSEN54-206ENST00000579449 SPANXB1Q9NS25 103 aaPredicted RBP8.99□□□□□ -0.97
TSEN54-206ENST00000579449 DDTP30046 118 aa8.98□□□□□ -0.97
TSEN54-206ENST00000579449 DAND5Q8N907 189 aa8.98□□□□□ -0.97
TSEN54-206ENST00000579449 SPANXDQ9BXN6 97 aa8.98□□□□□ -0.97
TSEN54-206ENST00000579449 SPANXCQ9NY87 97 aa8.98□□□□□ -0.97
TSEN54-206ENST00000579449 FUSP35637 526 aaKnown RBP eCLIP8.97□□□□□ -0.97
TSEN54-206ENST00000579449 SRSF9Q13242 221 aaKnown RBP eCLIP8.97□□□□□ -0.97
TSEN54-206ENST00000579449 MIR7-3HGQ8N6C7 128 aa8.97□□□□□ -0.97
TSEN54-206ENST00000579449 HIST1H4GQ99525 98 aa8.97□□□□□ -0.97
TSEN54-206ENST00000579449 PCP4L1A6NKN8 68 aa8.96□□□□□ -0.98
TSEN54-206ENST00000579449 CTAG1AP78358 180 aa8.96□□□□□ -0.98
TSEN54-206ENST00000579449 LINC00336Q6ZUF6 198 aa8.96□□□□□ -0.98
TSEN54-206ENST00000579449 KMT2CQ8NEZ4 4911 aaKnown RBP8.96□□□□□ -0.98
TSEN54-206ENST00000579449 NDUFC2-KCTD14E9PQ53 114 aa8.95□□□□□ -0.98
TSEN54-206ENST00000579449 TLX1NBP0CAT3 122 aa8.95□□□□□ -0.98
TSEN54-206ENST00000579449 NPC2P61916 151 aa8.95□□□□□ -0.98
TSEN54-206ENST00000579449 C9orf163Q8N9P6 203 aa8.95□□□□□ -0.98
TSEN54-206ENST00000579449 LOC107984640A0A0U1RRK4 108 aa8.94□□□□□ -0.98
TSEN54-206ENST00000579449 RPL18AQ02543 176 aaKnown RBP8.94□□□□□ -0.98
TSEN54-206ENST00000579449 HSD52Q0P140 79 aa8.94□□□□□ -0.98
TSEN54-206ENST00000579449 TAL2Q16559 108 aa8.94□□□□□ -0.98
TSEN54-206ENST00000579449 Q6ZRP5 223 aa8.94□□□□□ -0.98
TSEN54-206ENST00000579449 Q6ZVH6 145 aa8.94□□□□□ -0.98
TSEN54-206ENST00000579449 HECTD4Q9Y4D8 3996 aa8.94□□□□□ -0.98
TSEN54-206ENST00000579449 RYR2Q92736 4967 aa8.94□□□□□ -0.98
TSEN54-206ENST00000579449 IGLV5-52A0A0A0MRZ9 124 aa8.93□□□□□ -0.98
TSEN54-206ENST00000579449 EIF4EBP3O60516 100 aaPredicted RBP8.93□□□□□ -0.98
TSEN54-206ENST00000579449 KRTAP10-2P60368 255 aa8.93□□□□□ -0.98
TSEN54-206ENST00000579449 LINC01620Q4KN68 170 aa8.93□□□□□ -0.98
TSEN54-206ENST00000579449 GAGE2EQ4V326 116 aa8.93□□□□□ -0.98
TSEN54-206ENST00000579449 SOSTDC1Q6X4U4 206 aa8.93□□□□□ -0.98
TSEN54-206ENST00000579449 MUSTN1Q8IVN3 82 aa8.93□□□□□ -0.98
TSEN54-206ENST00000579449 LINC00308Q8TCZ7 52 aa8.93□□□□□ -0.98
TSEN54-206ENST00000579449 SND1-IT1Q9HBX3 110 aa8.93□□□□□ -0.98
TSEN54-206ENST00000579449 GAGE2DQ9UEU5 116 aa8.93□□□□□ -0.98
TSEN54-206ENST00000579449 FAT2Q9NYQ8 4349 aa8.93□□□□□ -0.98
TSEN54-206ENST00000579449 IFITM1P13164 125 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms