RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 URB1-AS1Q96HZ7 61 aa8.32□□□□□ -1.08
CSNK1D-211ENST00000579316 H0Y9J4 135 aa8.31□□□□□ -1.08
CSNK1D-211ENST00000579316 ZNF561-AS1K7EIQ3 104 aa8.31□□□□□ -1.08
CSNK1D-211ENST00000579316 ATP6V1G1O75348 118 aa8.31□□□□□ -1.08
CSNK1D-211ENST00000579316 HSBP1O75506 76 aa8.31□□□□□ -1.08
CSNK1D-211ENST00000579316 C1orf137Q5JT78 98 aa8.31□□□□□ -1.08
CSNK1D-211ENST00000579316 LINC00242Q5T6M2 205 aa8.31□□□□□ -1.08
CSNK1D-211ENST00000579316 LINC00173Q6ZV60 143 aa8.31□□□□□ -1.08
CSNK1D-211ENST00000579316 C5orf38Q86SI9 138 aa8.31□□□□□ -1.08
CSNK1D-211ENST00000579316 IGHV3OR16-9A0A0B4J2B5 98 aa8.3□□□□□ -1.08
CSNK1D-211ENST00000579316 ATP5LO75964 103 aa8.3□□□□□ -1.08
CSNK1D-211ENST00000579316 IGLV7-43P04211 117 aa8.3□□□□□ -1.08
CSNK1D-211ENST00000579316 HERVK_113P63121 156 aa8.3□□□□□ -1.08
CSNK1D-211ENST00000579316 PMVKQ15126 192 aa8.3□□□□□ -1.08
CSNK1D-211ENST00000579316 PMCHL1Q16048 86 aa8.3□□□□□ -1.08
CSNK1D-211ENST00000579316 CARD19Q96LW7 228 aa8.3□□□□□ -1.08
CSNK1D-211ENST00000579316 GEMIN7Q9H840 131 aaKnown RBP8.3□□□□□ -1.08
CSNK1D-211ENST00000579316 A0A096LNJ9 63 aa8.29□□□□□ -1.08
CSNK1D-211ENST00000579316 A0A1W2PNN7 141 aa8.29□□□□□ -1.08
CSNK1D-211ENST00000579316 RPL13AP40429 203 aaKnown RBP8.29□□□□□ -1.08
CSNK1D-211ENST00000579316 ZC2HC1BQ5TFG8 222 aa8.29□□□□□ -1.08
CSNK1D-211ENST00000579316 FAM19A3Q7Z5A8 133 aa8.29□□□□□ -1.08
CSNK1D-211ENST00000579316 OR10D4PQ8NGN7 298 aa8.29□□□□□ -1.08
CSNK1D-211ENST00000579316 A0A087WZ39 114 aa8.28□□□□□ -1.08
CSNK1D-211ENST00000579316 PDZD11Q5EBL8 140 aa8.28□□□□□ -1.08
CSNK1D-211ENST00000579316 NDUFA6P56556 154 aa8.27□□□□□ -1.09
CSNK1D-211ENST00000579316 SPAG11BQ08648 103 aa8.27□□□□□ -1.09
CSNK1D-211ENST00000579316 LINC01561Q8N1V8 128 aa8.27□□□□□ -1.09
CSNK1D-211ENST00000579316 ORAOV1Q8WV07 137 aa8.27□□□□□ -1.09
CSNK1D-211ENST00000579316 CST9LQ9H4G1 147 aa8.27□□□□□ -1.09
CSNK1D-211ENST00000579316 IGLV4-69A0A075B6H9 119 aa8.26□□□□□ -1.09
CSNK1D-211ENST00000579316 SERF1AO75920 110 aa8.26□□□□□ -1.09
CSNK1D-211ENST00000579316 C2orf48Q96LS8 159 aa8.26□□□□□ -1.09
CSNK1D-211ENST00000579316 PACRGQ96M98 296 aaPredicted RBP8.26□□□□□ -1.09
CSNK1D-211ENST00000579316 LOC107984640A0A0U1RRK4 108 aa8.25□□□□□ -1.09
CSNK1D-211ENST00000579316 TINCRA0A1B0GVN0 87 aa8.25□□□□□ -1.09
CSNK1D-211ENST00000579316 F8WDY8 70 aa8.25□□□□□ -1.09
CSNK1D-211ENST00000579316 SYCNQ0VAF6 134 aa8.25□□□□□ -1.09
CSNK1D-211ENST00000579316 C9orf116Q5BN46 136 aaPredicted RBP8.25□□□□□ -1.09
CSNK1D-211ENST00000579316 LINC00469Q8N7U9 141 aa8.25□□□□□ -1.09
CSNK1D-211ENST00000579316 LINC00526Q96FQ7 95 aa8.25□□□□□ -1.09
CSNK1D-211ENST00000579316 CAMK2N2Q96S95 79 aa8.25□□□□□ -1.09
CSNK1D-211ENST00000579316 GAGE2BQ13066 116 aa8.24□□□□□ -1.09
CSNK1D-211ENST00000579316 FAM19A2Q8N3H0 131 aa8.24□□□□□ -1.09
CSNK1D-211ENST00000579316 IFI27L1Q96BM0 104 aa8.24□□□□□ -1.09
CSNK1D-211ENST00000579316 H3BRM9 83 aa8.23□□□□□ -1.09
CSNK1D-211ENST00000579316 NDUFA1O15239 70 aa8.23□□□□□ -1.09
CSNK1D-211ENST00000579316 HIST1H2BKO60814 126 aa8.23□□□□□ -1.09
CSNK1D-211ENST00000579316 HIST1H2BJP06899 126 aa8.23□□□□□ -1.09
CSNK1D-211ENST00000579316 PRSS2P07478 247 aa8.23□□□□□ -1.09
CSNK1D-211ENST00000579316 HIST1H2BOP23527 126 aa8.23□□□□□ -1.09
CSNK1D-211ENST00000579316 HIST1H2BBP33778 126 aa8.23□□□□□ -1.09
CSNK1D-211ENST00000579316 HIST1H2BDP58876 126 aa8.23□□□□□ -1.09
CSNK1D-211ENST00000579316 HIST1H2BCP62807 126 aa8.23□□□□□ -1.09
CSNK1D-211ENST00000579316 HIST2H2BEQ16778 126 aa8.23□□□□□ -1.09
CSNK1D-211ENST00000579316 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.23□□□□□ -1.09
CSNK1D-211ENST00000579316 PHF5AQ7RTV0 110 aaKnown RBP8.23□□□□□ -1.09
CSNK1D-211ENST00000579316 HIST1H2BHQ93079 126 aa8.23□□□□□ -1.09
CSNK1D-211ENST00000579316 HIST1H2BNQ99877 126 aa8.23□□□□□ -1.09
CSNK1D-211ENST00000579316 HIST1H2BMQ99879 126 aa8.23□□□□□ -1.09
CSNK1D-211ENST00000579316 CDKN2A-AS1Q9UH64 79 aa8.23□□□□□ -1.09
CSNK1D-211ENST00000579316 IGLV5-45A0A087WSX0 123 aa8.22□□□□□ -1.09
CSNK1D-211ENST00000579316 LEPROTL1O95214 131 aa8.22□□□□□ -1.09
CSNK1D-211ENST00000579316 HSPB8Q9UJY1 196 aa8.22□□□□□ -1.09
CSNK1D-211ENST00000579316 TRAV12-1A0A0B4J245 112 aa8.21□□□□□ -1.1
CSNK1D-211ENST00000579316 IGLC3P0DOY3 106 aa8.21□□□□□ -1.1
CSNK1D-211ENST00000579316 LINC00310P59036 64 aa8.21□□□□□ -1.1
CSNK1D-211ENST00000579316 TOMM7Q9P0U1 55 aa8.21□□□□□ -1.1
CSNK1D-211ENST00000579316 C6orf226Q5I0X4 101 aa8.2□□□□□ -1.1
CSNK1D-211ENST00000579316 Q8IZM0 81 aa8.2□□□□□ -1.1
CSNK1D-211ENST00000579316 CHTOPQ9Y3Y2 248 aaKnown RBP8.2□□□□□ -1.1
CSNK1D-211ENST00000579316 TSPAN13O95857 204 aa8.19□□□□□ -1.1
CSNK1D-211ENST00000579316 CKS1BP61024 79 aa8.19□□□□□ -1.1
CSNK1D-211ENST00000579316 RNF151Q2KHN1 245 aa8.19□□□□□ -1.1
CSNK1D-211ENST00000579316 KRTAP11-1Q8IUC1 163 aa8.19□□□□□ -1.1
CSNK1D-211ENST00000579316 MRPL35Q9NZE8 188 aaKnown RBP8.19□□□□□ -1.1
CSNK1D-211ENST00000579316 SMIM1B2RUZ4 78 aa8.18□□□□□ -1.1
CSNK1D-211ENST00000579316 NUPR1O60356 82 aa8.18□□□□□ -1.1
CSNK1D-211ENST00000579316 FABP4P15090 132 aa8.18□□□□□ -1.1
CSNK1D-211ENST00000579316 CXCL5P42830 114 aa8.18□□□□□ -1.1
CSNK1D-211ENST00000579316 KIAA0087Q14695 138 aa8.18□□□□□ -1.1
CSNK1D-211ENST00000579316 TRBV30A0A0K0K1B3 111 aa8.17□□□□□ -1.1
CSNK1D-211ENST00000579316 F8VRH5 84 aa8.17□□□□□ -1.1
CSNK1D-211ENST00000579316 H0Y8G0 127 aa8.17□□□□□ -1.1
CSNK1D-211ENST00000579316 SPINK8P0C7L1 97 aa8.17□□□□□ -1.1
CSNK1D-211ENST00000579316 TMEM170BQ5T4T1 132 aa8.17□□□□□ -1.1
CSNK1D-211ENST00000579316 COX7B2Q8TF08 81 aa8.17□□□□□ -1.1
CSNK1D-211ENST00000579316 C11orf86A6NJI1 115 aa8.16□□□□□ -1.1
CSNK1D-211ENST00000579316 ZNF22P17026 224 aaPredicted RBP8.16□□□□□ -1.1
CSNK1D-211ENST00000579316 LINC01547P58512 204 aaPredicted RBP8.16□□□□□ -1.1
CSNK1D-211ENST00000579316 TPRXLQ17RH7 258 aa8.16□□□□□ -1.1
CSNK1D-211ENST00000579316 UNQ6190/PRO20217Q6UXQ8 127 aa8.16□□□□□ -1.1
CSNK1D-211ENST00000579316 MAP1LC3CQ9BXW4 147 aa8.16□□□□□ -1.1
CSNK1D-211ENST00000579316 RPL18AQ02543 176 aaKnown RBP8.15□□□□□ -1.1
CSNK1D-211ENST00000579316 COA6Q5JTJ3 125 aaKnown RBP8.15□□□□□ -1.1
CSNK1D-211ENST00000579316 CDIP1Q9H305 208 aa8.15□□□□□ -1.1
CSNK1D-211ENST00000579316 C10orf25Q5T742 122 aa8.14□□□□□ -1.11
CSNK1D-211ENST00000579316 C2orf82Q6UX34 121 aa8.14□□□□□ -1.11
CSNK1D-211ENST00000579316 C6orf48Q9UBA6 75 aa8.14□□□□□ -1.11
CSNK1D-211ENST00000579316 TLX1NBP0CAT3 122 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms