RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 HNRNPA3P51991 378 aaKnown RBP9.26□□□□□ -0.93
CSNK1D-209ENST00000578904 SPAG11BQ08648 103 aa9.26□□□□□ -0.93
CSNK1D-209ENST00000578904 C14orf177Q52M58 125 aa9.26□□□□□ -0.93
CSNK1D-209ENST00000578904 GCSHP23434 173 aa9.25□□□□□ -0.93
CSNK1D-209ENST00000578904 HIGD1BQ9P298 99 aa9.25□□□□□ -0.93
CSNK1D-209ENST00000578904 DNAH2Q9P225 4427 aa9.24□□□□□ -0.93
CSNK1D-209ENST00000578904 TSPEAR-AS2P59090 65 aa9.24□□□□□ -0.93
CSNK1D-209ENST00000578904 FRAS1Q86XX4 4008 aa9.23□□□□□ -0.93
CSNK1D-209ENST00000578904 TMEM238C9JI98 176 aa9.23□□□□□ -0.93
CSNK1D-209ENST00000578904 DDTP30046 118 aa9.23□□□□□ -0.93
CSNK1D-209ENST00000578904 MAPKAPK5-AS1Q8N8E1 139 aa9.23□□□□□ -0.93
CSNK1D-209ENST00000578904 C2orf48Q96LS8 159 aa9.23□□□□□ -0.93
CSNK1D-209ENST00000578904 GVQW2A0A096LPI5 108 aaPredicted RBP9.22□□□□□ -0.93
CSNK1D-209ENST00000578904 RTL8CO15255 209 aa9.22□□□□□ -0.93
CSNK1D-209ENST00000578904 MEIG1Q5JSS6 88 aa9.22□□□□□ -0.93
CSNK1D-209ENST00000578904 COPS9Q8WXC6 57 aa9.22□□□□□ -0.93
CSNK1D-209ENST00000578904 TTTY13Q9BZ97 58 aa9.22□□□□□ -0.93
CSNK1D-209ENST00000578904 USP17L23D6RBM5 183 aa9.21□□□□□ -0.94
CSNK1D-209ENST00000578904 TIMM17BO60830 172 aa9.21□□□□□ -0.94
CSNK1D-209ENST00000578904 KIAA0087Q14695 138 aa9.21□□□□□ -0.94
CSNK1D-209ENST00000578904 Q6ZRN7 208 aaPredicted RBP9.21□□□□□ -0.94
CSNK1D-209ENST00000578904 C15orf56Q8N910 161 aa9.21□□□□□ -0.94
CSNK1D-209ENST00000578904 ZNF625Q96I27 306 aaPredicted RBP9.21□□□□□ -0.94
CSNK1D-209ENST00000578904 CAMK2N2Q96S95 79 aa9.21□□□□□ -0.94
CSNK1D-209ENST00000578904 DNAH10Q8IVF4 4471 aa9.21□□□□□ -0.94
CSNK1D-209ENST00000578904 A0A0J9YXY3 114 aa9.2□□□□□ -0.94
CSNK1D-209ENST00000578904 PCP4L1A6NKN8 68 aa9.2□□□□□ -0.94
CSNK1D-209ENST00000578904 SRSF9Q13242 221 aaKnown RBP eCLIP9.2□□□□□ -0.941e-6■■□□□ 12.6
CSNK1D-209ENST00000578904 COX17Q14061 63 aa9.2□□□□□ -0.94
CSNK1D-209ENST00000578904 TAL2Q16559 108 aa9.2□□□□□ -0.94
CSNK1D-209ENST00000578904 HIGD2BQ4VC39 106 aa9.2□□□□□ -0.94
CSNK1D-209ENST00000578904 Q6ZVH6 145 aa9.2□□□□□ -0.94
CSNK1D-209ENST00000578904 NTN5Q8WTR8 489 aaPredicted RBP9.2□□□□□ -0.94
CSNK1D-209ENST00000578904 TRBV30A0A0K0K1B3 111 aa9.19□□□□□ -0.94
CSNK1D-209ENST00000578904 LINC00336Q6ZUF6 198 aa9.19□□□□□ -0.94
CSNK1D-209ENST00000578904 EREGO14944 169 aa9.18□□□□□ -0.94
CSNK1D-209ENST00000578904 HIST1H4GQ99525 98 aa9.18□□□□□ -0.94
CSNK1D-209ENST00000578904 SPANXB1Q9NS25 103 aaPredicted RBP9.18□□□□□ -0.94
CSNK1D-209ENST00000578904 DNAH17Q9UFH2 4485 aa9.18□□□□□ -0.94
CSNK1D-209ENST00000578904 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.17□□□□□ -0.94
CSNK1D-209ENST00000578904 M0R143 59 aa9.17□□□□□ -0.94
CSNK1D-209ENST00000578904 HSD52Q0P140 79 aa9.17□□□□□ -0.94
CSNK1D-209ENST00000578904 SYCNQ0VAF6 134 aa9.17□□□□□ -0.94
CSNK1D-209ENST00000578904 C2orf82Q6UX34 121 aa9.17□□□□□ -0.94
CSNK1D-209ENST00000578904 ERG28Q9UKR5 140 aa9.17□□□□□ -0.94
CSNK1D-209ENST00000578904 PKIGQ9Y2B9 76 aa9.17□□□□□ -0.94
CSNK1D-209ENST00000578904 LINC00158P58513 81 aa9.16□□□□□ -0.94
CSNK1D-209ENST00000578904 TNP2Q05952 138 aa9.16□□□□□ -0.94
CSNK1D-209ENST00000578904 RNF151Q2KHN1 245 aa9.16□□□□□ -0.94
CSNK1D-209ENST00000578904 C2orf91Q6ZV80 131 aa9.16□□□□□ -0.94
CSNK1D-209ENST00000578904 FAT2Q9NYQ8 4349 aa9.16□□□□□ -0.94
CSNK1D-209ENST00000578904 IFITM1P13164 125 aa9.15□□□□□ -0.94
CSNK1D-209ENST00000578904 CTAG1AP78358 180 aa9.15□□□□□ -0.94
CSNK1D-209ENST00000578904 UNQ6190/PRO20217Q6UXQ8 127 aa9.15□□□□□ -0.94
CSNK1D-209ENST00000578904 CARD19Q96LW7 228 aa9.15□□□□□ -0.94
CSNK1D-209ENST00000578904 SPANXDQ9BXN6 97 aa9.15□□□□□ -0.94
CSNK1D-209ENST00000578904 SPANXCQ9NY87 97 aa9.15□□□□□ -0.94
CSNK1D-209ENST00000578904 LECT2O14960 151 aa9.14□□□□□ -0.95
CSNK1D-209ENST00000578904 LINC00526Q96FQ7 95 aa9.14□□□□□ -0.95
CSNK1D-209ENST00000578904 TMEM238LA0A1B0GVL6 79 aa9.13□□□□□ -0.95
CSNK1D-209ENST00000578904 A6NJY4 79 aa9.13□□□□□ -0.95
CSNK1D-209ENST00000578904 SMIM13P0DJ93 91 aa9.13□□□□□ -0.95
CSNK1D-209ENST00000578904 PFN2P35080 140 aa9.13□□□□□ -0.95
CSNK1D-209ENST00000578904 RPL24P83731 157 aaKnown RBP9.13□□□□□ -0.95
CSNK1D-209ENST00000578904 TP73-AS1Q9UF72 201 aa9.13□□□□□ -0.95
CSNK1D-209ENST00000578904 A0A087WTM6 91 aa9.12□□□□□ -0.95
CSNK1D-209ENST00000578904 Q6ZRU5 148 aa9.12□□□□□ -0.95
CSNK1D-209ENST00000578904 CEND1Q8N111 149 aa9.12□□□□□ -0.95
CSNK1D-209ENST00000578904 HERC2O95714 4834 aa9.12□□□□□ -0.95
CSNK1D-209ENST00000578904 LRCOL1A6NCL2 159 aa9.11□□□□□ -0.95
CSNK1D-209ENST00000578904 PTTG1IPP53801 180 aa9.11□□□□□ -0.95
CSNK1D-209ENST00000578904 CNBPP62633 177 aaKnown RBP9.11□□□□□ -0.95
CSNK1D-209ENST00000578904 PPDPFQ9H3Y8 114 aa9.11□□□□□ -0.95
CSNK1D-209ENST00000578904 C6orf48Q9UBA6 75 aa9.11□□□□□ -0.95
CSNK1D-209ENST00000578904 A0A0U1RRA0 63 aa9.1□□□□□ -0.95
CSNK1D-209ENST00000578904 WFDC2Q14508 124 aa9.1□□□□□ -0.95
CSNK1D-209ENST00000578904 C10orf25Q5T742 122 aa9.1□□□□□ -0.95
CSNK1D-209ENST00000578904 MIR7-3HGQ8N6C7 128 aa9.1□□□□□ -0.95
CSNK1D-209ENST00000578904 NDUFC2-KCTD14E9PQ53 114 aa9.09□□□□□ -0.95
CSNK1D-209ENST00000578904 Q8N814 137 aa9.09□□□□□ -0.95
CSNK1D-209ENST00000578904 LITAFQ99732 161 aa9.09□□□□□ -0.95
CSNK1D-209ENST00000578904 A6NDN8 102 aa9.08□□□□□ -0.96
CSNK1D-209ENST00000578904 TLX1NBP0CAT3 122 aa9.08□□□□□ -0.96
CSNK1D-209ENST00000578904 ADAMTSL4-AS1Q5T5F5 129 aa9.08□□□□□ -0.96
CSNK1D-209ENST00000578904 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.07□□□□□ -0.96
CSNK1D-209ENST00000578904 LOC107984640A0A0U1RRK4 108 aa9.07□□□□□ -0.96
CSNK1D-209ENST00000578904 HINT1P49773 126 aaPredicted RBP9.07□□□□□ -0.96
CSNK1D-209ENST00000578904 C9orf116Q5BN46 136 aaPredicted RBP9.07□□□□□ -0.96
CSNK1D-209ENST00000578904 MUSTN1Q8IVN3 82 aa9.07□□□□□ -0.96
CSNK1D-209ENST00000578904 LINC00308Q8TCZ7 52 aa9.07□□□□□ -0.96
CSNK1D-209ENST00000578904 PCLOQ9Y6V0 5065 aa9.07□□□□□ -0.96
CSNK1D-209ENST00000578904 HECTD4Q9Y4D8 3996 aa9.06□□□□□ -0.96
CSNK1D-209ENST00000578904 A0A1B0GVY2 172 aa9.06□□□□□ -0.96
CSNK1D-209ENST00000578904 BVES-AS1Q5T3Y7 98 aa9.06□□□□□ -0.96
CSNK1D-209ENST00000578904 DAND5Q8N907 189 aa9.06□□□□□ -0.96
CSNK1D-209ENST00000578904 BATFQ16520 125 aa9.05□□□□□ -0.96
CSNK1D-209ENST00000578904 DNAH11Q96DT5 4516 aa9.05□□□□□ -0.96
CSNK1D-209ENST00000578904 LOC107984156A0A0G2JMH3 177 aa9.04□□□□□ -0.96
CSNK1D-209ENST00000578904 SLPIP03973 132 aa9.04□□□□□ -0.96
CSNK1D-209ENST00000578904 NPC2P61916 151 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms