RNA–Protein interactions for RNA: ENST00000578694.1

RAB11FIP4-203, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 5

Gene RAB11FIP4, Length 487 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-203ENST00000578694 TRBV30A0A0K0K1B3 111 aa13.36□□□□□ -0.27
RAB11FIP4-203ENST00000578694 COLCA2A8K830 154 aa13.36□□□□□ -0.27
RAB11FIP4-203ENST00000578694 PRSS2P07478 247 aa13.36□□□□□ -0.27
RAB11FIP4-203ENST00000578694 TLX1NBP0CAT3 122 aa13.36□□□□□ -0.27
RAB11FIP4-203ENST00000578694 SMIM1B2RUZ4 78 aa13.35□□□□□ -0.27
RAB11FIP4-203ENST00000578694 ATP5LO75964 103 aa13.35□□□□□ -0.27
RAB11FIP4-203ENST00000578694 NDUFA6P56556 154 aa13.34□□□□□ -0.27
RAB11FIP4-203ENST00000578694 C6orf226Q5I0X4 101 aa13.34□□□□□ -0.27
RAB11FIP4-203ENST00000578694 C7orf33Q8WU49 177 aa13.34□□□□□ -0.27
RAB11FIP4-203ENST00000578694 IGLC3P0DOY3 106 aa13.33□□□□□ -0.28
RAB11FIP4-203ENST00000578694 CKS1BP61024 79 aa13.33□□□□□ -0.28
RAB11FIP4-203ENST00000578694 Q6ZRP5 223 aa13.33□□□□□ -0.28
RAB11FIP4-203ENST00000578694 A0A1W2PNN7 141 aa13.32□□□□□ -0.28
RAB11FIP4-203ENST00000578694 BAGE3Q86Y29 109 aa13.32□□□□□ -0.28
RAB11FIP4-203ENST00000578694 C9orf116Q5BN46 136 aaPredicted RBP13.31□□□□□ -0.28
RAB11FIP4-203ENST00000578694 SPINK8P0C7L1 97 aa13.3□□□□□ -0.28
RAB11FIP4-203ENST00000578694 HNRNPA3P51991 378 aaKnown RBP13.3□□□□□ -0.28
RAB11FIP4-203ENST00000578694 NDUFC2-KCTD14E9PQ53 114 aa13.29□□□□□ -0.28
RAB11FIP4-203ENST00000578694 HSBP1O75506 76 aa13.29□□□□□ -0.28
RAB11FIP4-203ENST00000578694 SCO1O75880 301 aa13.29□□□□□ -0.28
RAB11FIP4-203ENST00000578694 F8VRH5 84 aa13.28□□□□□ -0.28
RAB11FIP4-203ENST00000578694 H3BRM9 83 aa13.28□□□□□ -0.28
RAB11FIP4-203ENST00000578694 CXCL5P42830 114 aa13.28□□□□□ -0.28
RAB11FIP4-203ENST00000578694 LINC00310P59036 64 aa13.28□□□□□ -0.28
RAB11FIP4-203ENST00000578694 GAGE2EQ4V326 116 aa13.28□□□□□ -0.28
RAB11FIP4-203ENST00000578694 COX7B2Q8TF08 81 aa13.28□□□□□ -0.28
RAB11FIP4-203ENST00000578694 GAGE2DQ9UEU5 116 aa13.28□□□□□ -0.28
RAB11FIP4-203ENST00000578694 ZNF22P17026 224 aaPredicted RBP13.27□□□□□ -0.29
RAB11FIP4-203ENST00000578694 FAM19A2Q8N3H0 131 aa13.27□□□□□ -0.29
RAB11FIP4-203ENST00000578694 IFI27L1Q96BM0 104 aa13.27□□□□□ -0.29
RAB11FIP4-203ENST00000578694 C11orf86A6NJI1 115 aa13.25□□□□□ -0.29
RAB11FIP4-203ENST00000578694 SERF1AO75920 110 aa13.25□□□□□ -0.29
RAB11FIP4-203ENST00000578694 PRR3P79522 188 aaKnown RBP13.25□□□□□ -0.29
RAB11FIP4-203ENST00000578694 PKHD1L1Q86WI1 4243 aa13.24□□□□□ -0.29
RAB11FIP4-203ENST00000578694 FAM168BA1KXE4 195 aa13.24□□□□□ -0.29
RAB11FIP4-203ENST00000578694 TRAV12-1A0A0B4J245 112 aa13.23□□□□□ -0.29
RAB11FIP4-203ENST00000578694 IGLV5-39A0A0G2JS06 123 aa13.23□□□□□ -0.29
RAB11FIP4-203ENST00000578694 CHTOPQ9Y3Y2 248 aaKnown RBP13.23□□□□□ -0.29
RAB11FIP4-203ENST00000578694 C9orf129Q5T035 196 aaKnown RBP13.22□□□□□ -0.29
RAB11FIP4-203ENST00000578694 PHF5AQ7RTV0 110 aaKnown RBP13.21□□□□□ -0.29
RAB11FIP4-203ENST00000578694 KRTAP29-1A8MX34 341 aaPredicted RBP13.2□□□□□ -0.3
RAB11FIP4-203ENST00000578694 J3QL48 77 aa13.2□□□□□ -0.3
RAB11FIP4-203ENST00000578694 NUPR1O60356 82 aa13.2□□□□□ -0.3
RAB11FIP4-203ENST00000578694 TMEM170BQ5T4T1 132 aa13.2□□□□□ -0.3
RAB11FIP4-203ENST00000578694 FAM19A5Q7Z5A7 132 aaPredicted RBP13.2□□□□□ -0.3
RAB11FIP4-203ENST00000578694 KRTAP7-1Q8IUC3 87 aa13.2□□□□□ -0.3
RAB11FIP4-203ENST00000578694 LEPROTL1O95214 131 aa13.18□□□□□ -0.3
RAB11FIP4-203ENST00000578694 LRP1Q07954 4544 aaKnown RBP13.17□□□□□ -0.3
RAB11FIP4-203ENST00000578694 XAGE1AQ9HD64 81 aa13.16□□□□□ -0.3
RAB11FIP4-203ENST00000578694 FAT3Q8TDW7 4589 aa13.15□□□□□ -0.3
RAB11FIP4-203ENST00000578694 HIST1H2BKO60814 126 aa13.15□□□□□ -0.3
RAB11FIP4-203ENST00000578694 HIST1H2BJP06899 126 aa13.15□□□□□ -0.3
RAB11FIP4-203ENST00000578694 HIST1H2BOP23527 126 aa13.15□□□□□ -0.3
RAB11FIP4-203ENST00000578694 HIST1H2BBP33778 126 aa13.15□□□□□ -0.3
RAB11FIP4-203ENST00000578694 HIST1H2BDP58876 126 aa13.15□□□□□ -0.3
RAB11FIP4-203ENST00000578694 HIST1H2BCP62807 126 aa13.15□□□□□ -0.3
RAB11FIP4-203ENST00000578694 HIST2H2BEQ16778 126 aa13.15□□□□□ -0.3
RAB11FIP4-203ENST00000578694 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.15□□□□□ -0.3
RAB11FIP4-203ENST00000578694 HIST1H2BHQ93079 126 aa13.15□□□□□ -0.3
RAB11FIP4-203ENST00000578694 HIST1H2BNQ99877 126 aa13.15□□□□□ -0.3
RAB11FIP4-203ENST00000578694 HIST1H2BMQ99879 126 aa13.15□□□□□ -0.3
RAB11FIP4-203ENST00000578694 M0QXV9 152 aa13.14□□□□□ -0.31
RAB11FIP4-203ENST00000578694 OXTP01178 125 aa13.14□□□□□ -0.31
RAB11FIP4-203ENST00000578694 ODF1Q14990 250 aa13.14□□□□□ -0.31
RAB11FIP4-203ENST00000578694 PSORS1C2Q9UIG4 136 aa13.14□□□□□ -0.31
RAB11FIP4-203ENST00000578694 TMEM223A0PJW6 202 aa13.13□□□□□ -0.31
RAB11FIP4-203ENST00000578694 H0Y8G0 127 aa13.13□□□□□ -0.31
RAB11FIP4-203ENST00000578694 HSPB8Q9UJY1 196 aa13.13□□□□□ -0.31
RAB11FIP4-203ENST00000578694 SERTAD4-AS1Q5TG53 156 aa13.12□□□□□ -0.31
RAB11FIP4-203ENST00000578694 FABP4P15090 132 aa13.11□□□□□ -0.31
RAB11FIP4-203ENST00000578694 KRTAP11-1Q8IUC1 163 aa13.11□□□□□ -0.31
RAB11FIP4-203ENST00000578694 SFTA2Q6UW10 78 aa13.09□□□□□ -0.31
RAB11FIP4-203ENST00000578694 C1orf137Q5JT78 98 aa13.08□□□□□ -0.32
RAB11FIP4-203ENST00000578694 ZNF625Q96I27 306 aaPredicted RBP13.08□□□□□ -0.32
RAB11FIP4-203ENST00000578694 PFN2P35080 140 aa13.07□□□□□ -0.32
RAB11FIP4-203ENST00000578694 UBE2BP63146 152 aa13.07□□□□□ -0.32
RAB11FIP4-203ENST00000578694 SRSF9Q13242 221 aaKnown RBP eCLIP13.07□□□□□ -0.32
RAB11FIP4-203ENST00000578694 SPINK6Q6UWN8 80 aa13.07□□□□□ -0.32
RAB11FIP4-203ENST00000578694 ERG28Q9UKR5 140 aa13.07□□□□□ -0.32
RAB11FIP4-203ENST00000578694 C22orf24Q9Y442 160 aa13.07□□□□□ -0.32
RAB11FIP4-203ENST00000578694 PLNP26678 52 aa13.05□□□□□ -0.32
RAB11FIP4-203ENST00000578694 COX17Q14061 63 aa13.04□□□□□ -0.32
RAB11FIP4-203ENST00000578694 MAP1LC3CQ9BXW4 147 aa13.04□□□□□ -0.32
RAB11FIP4-203ENST00000578694 PLA2G2DQ9UNK4 145 aa13.04□□□□□ -0.32
RAB11FIP4-203ENST00000578694 PMCHL2Q9BQD1 86 aa13.03□□□□□ -0.32
RAB11FIP4-203ENST00000578694 TP73-AS1Q9UF72 201 aa13.03□□□□□ -0.32
RAB11FIP4-203ENST00000578694 DPM2O94777 84 aa13.02□□□□□ -0.33
RAB11FIP4-203ENST00000578694 LBHQ53QV2 105 aaPredicted RBP13.02□□□□□ -0.33
RAB11FIP4-203ENST00000578694 IGLV7-43P04211 117 aa13.01□□□□□ -0.33
RAB11FIP4-203ENST00000578694 S100A1P23297 94 aa13.01□□□□□ -0.33
RAB11FIP4-203ENST00000578694 MRPL55Q7Z7F7 128 aaKnown RBP13.01□□□□□ -0.33
RAB11FIP4-203ENST00000578694 SND1-IT1Q9HBX3 110 aa13.01□□□□□ -0.33
RAB11FIP4-203ENST00000578694 IGLV5-37A0A075B6J1 123 aa13□□□□□ -0.33
RAB11FIP4-203ENST00000578694 COA6Q5JTJ3 125 aaKnown RBP13□□□□□ -0.33
RAB11FIP4-203ENST00000578694 ATP6V1G1O75348 118 aa12.99□□□□□ -0.33
RAB11FIP4-203ENST00000578694 IGKCP01834 107 aa12.99□□□□□ -0.33
RAB11FIP4-203ENST00000578694 MT1HL1P0DM35 61 aa12.99□□□□□ -0.33
RAB11FIP4-203ENST00000578694 SYS1-DBNDD2H3BUS1 97 aa12.97□□□□□ -0.33
RAB11FIP4-203ENST00000578694 TSPEAR-AS2P59090 65 aa12.97□□□□□ -0.33
RAB11FIP4-203ENST00000578694 REG3GQ6UW15 175 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms