RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 DEFB104AQ8WTQ1 72 aa3.37□□□□□ -1.87
PTPRM-207ENST00000578571 IFI27L1Q96BM0 104 aa3.37□□□□□ -1.87
PTPRM-207ENST00000578571 GEMIN7Q9H840 131 aaKnown RBP3.37□□□□□ -1.87
PTPRM-207ENST00000578571 CDC42SE2Q9NRR3 84 aa3.37□□□□□ -1.87
PTPRM-207ENST00000578571 IGKV2D-24A0A075B6R9 120 aa3.36□□□□□ -1.87
PTPRM-207ENST00000578571 IGKV3OR2-268A0A0C4DH90 116 aa3.36□□□□□ -1.87
PTPRM-207ENST00000578571 H3BRM9 83 aa3.36□□□□□ -1.87
PTPRM-207ENST00000578571 APOMO95445 188 aa3.36□□□□□ -1.87
PTPRM-207ENST00000578571 PMVKQ15126 192 aa3.36□□□□□ -1.87
PTPRM-207ENST00000578571 C1orf134Q5TEV5 83 aa3.36□□□□□ -1.87
PTPRM-207ENST00000578571 LINC00269Q8N2A0 174 aa3.36□□□□□ -1.87
PTPRM-207ENST00000578571 Q9HAA7 133 aa3.36□□□□□ -1.87
PTPRM-207ENST00000578571 COL7A1Q02388 2944 aa3.36□□□□□ -1.87
PTPRM-207ENST00000578571 IGLV4-60A0A075B6I1 120 aa3.35□□□□□ -1.87
PTPRM-207ENST00000578571 TRAV13-1A0A0B4J241 112 aa3.35□□□□□ -1.87
PTPRM-207ENST00000578571 TRAV12-1A0A0B4J245 112 aa3.35□□□□□ -1.87
PTPRM-207ENST00000578571 IGIPA6NJ69 53 aa3.35□□□□□ -1.87
PTPRM-207ENST00000578571 FABP4P15090 132 aa3.35□□□□□ -1.87
PTPRM-207ENST00000578571 PLNP26678 52 aa3.35□□□□□ -1.87
PTPRM-207ENST00000578571 HERVK_113P63121 156 aa3.35□□□□□ -1.87
PTPRM-207ENST00000578571 PMCHL1Q16048 86 aa3.35□□□□□ -1.87
PTPRM-207ENST00000578571 PDZD11Q5EBL8 140 aa3.35□□□□□ -1.87
PTPRM-207ENST00000578571 CLPSL2Q6UWE3 100 aa3.35□□□□□ -1.87
PTPRM-207ENST00000578571 Q6ZUT4 128 aa3.35□□□□□ -1.87
PTPRM-207ENST00000578571 C6orf223Q8N319 242 aa3.35□□□□□ -1.87
PTPRM-207ENST00000578571 FAM19A2Q8N3H0 131 aa3.35□□□□□ -1.87
PTPRM-207ENST00000578571 PKIGQ9Y2B9 76 aa3.35□□□□□ -1.87
PTPRM-207ENST00000578571 LINC00959A0A1B0GUT2 108 aa3.34□□□□□ -1.87
PTPRM-207ENST00000578571 H0Y8G0 127 aa3.34□□□□□ -1.87
PTPRM-207ENST00000578571 M0R2N4 97 aa3.34□□□□□ -1.87
PTPRM-207ENST00000578571 COX7A2LO14548 114 aa3.34□□□□□ -1.87
PTPRM-207ENST00000578571 HERVK_113P61574 105 aa3.34□□□□□ -1.87
PTPRM-207ENST00000578571 HERV-K104P63124 156 aa3.34□□□□□ -1.87
PTPRM-207ENST00000578571 BAALCQ8WXS3 180 aa3.34□□□□□ -1.87
PTPRM-207ENST00000578571 CHCHD10Q8WYQ3 142 aaPredicted RBP3.34□□□□□ -1.87
PTPRM-207ENST00000578571 CHTOPQ9Y3Y2 248 aaKnown RBP3.34□□□□□ -1.87
PTPRM-207ENST00000578571 TGP01266 2768 aa3.34□□□□□ -1.88
PTPRM-207ENST00000578571 IGLV10-54A0A075B6I4 117 aa3.33□□□□□ -1.88
PTPRM-207ENST00000578571 A0A096LNJ9 63 aa3.33□□□□□ -1.88
PTPRM-207ENST00000578571 TINCRA0A1B0GVN0 87 aa3.33□□□□□ -1.88
PTPRM-207ENST00000578571 A8MU10 97 aa3.33□□□□□ -1.88
PTPRM-207ENST00000578571 HSBP1L1C9JCN9 74 aa3.33□□□□□ -1.88
PTPRM-207ENST00000578571 F8VRH5 84 aa3.33□□□□□ -1.88
PTPRM-207ENST00000578571 SYS1-DBNDD2H3BUS1 97 aa3.33□□□□□ -1.88
PTPRM-207ENST00000578571 DPM2O94777 84 aa3.33□□□□□ -1.88
PTPRM-207ENST00000578571 XCL1P47992 114 aa3.33□□□□□ -1.88
PTPRM-207ENST00000578571 UBE2D1P51668 147 aa3.33□□□□□ -1.88
PTPRM-207ENST00000578571 KRTDAPP60985 99 aa3.33□□□□□ -1.88
PTPRM-207ENST00000578571 RNASE13Q5GAN3 156 aaKnown RBP3.33□□□□□ -1.88
PTPRM-207ENST00000578571 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
PTPRM-207ENST00000578571 SFTA2Q6UW10 78 aa3.33□□□□□ -1.88
PTPRM-207ENST00000578571 LINC00336Q6ZUF6 198 aa3.33□□□□□ -1.88
PTPRM-207ENST00000578571 LINC01561Q8N1V8 128 aa3.33□□□□□ -1.88
PTPRM-207ENST00000578571 HIST3H2BBQ8N257 126 aa3.33□□□□□ -1.88
PTPRM-207ENST00000578571 LINC00469Q8N7U9 141 aa3.33□□□□□ -1.88
PTPRM-207ENST00000578571 AMELXQ99217 191 aa3.33□□□□□ -1.88
PTPRM-207ENST00000578571 CHAC1Q9BUX1 264 aa3.33□□□□□ -1.88
PTPRM-207ENST00000578571 CST9LQ9H4G1 147 aa3.33□□□□□ -1.88
PTPRM-207ENST00000578571 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.32□□□□□ -1.88
PTPRM-207ENST00000578571 IGHV1-58A0A0C4DH39 117 aa3.32□□□□□ -1.88
PTPRM-207ENST00000578571 F8WDY8 70 aa3.32□□□□□ -1.88
PTPRM-207ENST00000578571 IGKCP01834 107 aa3.32□□□□□ -1.88
PTPRM-207ENST00000578571 TMEM170BQ5T4T1 132 aa3.32□□□□□ -1.88
PTPRM-207ENST00000578571 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
PTPRM-207ENST00000578571 ENHOQ6UWT2 76 aa3.32□□□□□ -1.88
PTPRM-207ENST00000578571 FAM19A3Q7Z5A8 133 aa3.32□□□□□ -1.88
PTPRM-207ENST00000578571 SPATA12Q7Z6I5 190 aa3.32□□□□□ -1.88
PTPRM-207ENST00000578571 LINC00518Q8N0U6 118 aa3.32□□□□□ -1.88
PTPRM-207ENST00000578571 OR10D4PQ8NGN7 298 aa3.32□□□□□ -1.88
PTPRM-207ENST00000578571 HIST1H2BLQ99880 126 aa3.32□□□□□ -1.88
PTPRM-207ENST00000578571 FAM168BA1KXE4 195 aa3.31□□□□□ -1.88
PTPRM-207ENST00000578571 NUPR1O60356 82 aa3.31□□□□□ -1.88
PTPRM-207ENST00000578571 IGLC3P0DOY3 106 aa3.31□□□□□ -1.88
PTPRM-207ENST00000578571 CXCL5P42830 114 aa3.31□□□□□ -1.88
PTPRM-207ENST00000578571 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
PTPRM-207ENST00000578571 MRPL35Q9NZE8 188 aaKnown RBP3.31□□□□□ -1.88
PTPRM-207ENST00000578571 IGHV3OR16-9A0A0B4J2B5 98 aa3.3□□□□□ -1.88
PTPRM-207ENST00000578571 A0A0J9YXV3 536 aa3.3□□□□□ -1.88
PTPRM-207ENST00000578571 C11orf86A6NJI1 115 aa3.3□□□□□ -1.88
PTPRM-207ENST00000578571 LINC00587B1AMM8 73 aa3.3□□□□□ -1.88
PTPRM-207ENST00000578571 C3orf79P0CE67 100 aa3.3□□□□□ -1.88
PTPRM-207ENST00000578571 KRTAP5-9P26371 169 aa3.3□□□□□ -1.88
PTPRM-207ENST00000578571 CKS1BP61024 79 aa3.3□□□□□ -1.88
PTPRM-207ENST00000578571 LINC01545Q5VT33 79 aa3.3□□□□□ -1.88
PTPRM-207ENST00000578571 LINC00173Q6ZV60 143 aa3.3□□□□□ -1.88
PTPRM-207ENST00000578571 C5orf38Q86SI9 138 aa3.3□□□□□ -1.88
PTPRM-207ENST00000578571 ORAOV1Q8WV07 137 aa3.3□□□□□ -1.88
PTPRM-207ENST00000578571 IGHV3-64A0A075B6Q5 118 aa3.29□□□□□ -1.88
PTPRM-207ENST00000578571 NDUFA1O15239 70 aa3.29□□□□□ -1.88
PTPRM-207ENST00000578571 LGALS3P17931 250 aaKnown RBP3.29□□□□□ -1.88
PTPRM-207ENST00000578571 S100A12P80511 92 aa3.29□□□□□ -1.88
PTPRM-207ENST00000578571 SPAG11BQ08648 103 aa3.29□□□□□ -1.88
PTPRM-207ENST00000578571 C6orf226Q5I0X4 101 aa3.29□□□□□ -1.88
PTPRM-207ENST00000578571 Q8IZM0 81 aa3.29□□□□□ -1.88
PTPRM-207ENST00000578571 PLEKHB2Q96CS7 222 aa3.29□□□□□ -1.88
PTPRM-207ENST00000578571 CAMK2N2Q96S95 79 aa3.29□□□□□ -1.88
PTPRM-207ENST00000578571 TOMM7Q9P0U1 55 aa3.29□□□□□ -1.88
PTPRM-207ENST00000578571 CDKN2A-AS1Q9UH64 79 aa3.29□□□□□ -1.88
PTPRM-207ENST00000578571 IGLV4-69A0A075B6H9 119 aa3.28□□□□□ -1.88
PTPRM-207ENST00000578571 A0A087WTM6 91 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms