RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 IGLV5-45A0A087WSX0 123 aa8.52□□□□□ -1.05
CSNK1D-208ENST00000578501 A0A096LNJ9 63 aa8.52□□□□□ -1.05
CSNK1D-208ENST00000578501 A0A1W2PNN7 141 aa8.52□□□□□ -1.05
CSNK1D-208ENST00000578501 C2orf82Q6UX34 121 aa8.52□□□□□ -1.05
CSNK1D-208ENST00000578501 PACRGQ96M98 296 aaPredicted RBP8.52□□□□□ -1.05
CSNK1D-208ENST00000578501 HBDP02042 147 aa8.51□□□□□ -1.05
CSNK1D-208ENST00000578501 PRR3P79522 188 aaKnown RBP8.51□□□□□ -1.05
CSNK1D-208ENST00000578501 C9orf116Q5BN46 136 aaPredicted RBP8.51□□□□□ -1.05
CSNK1D-208ENST00000578501 C6orf226Q5I0X4 101 aa8.51□□□□□ -1.05
CSNK1D-208ENST00000578501 Q6ZRP5 223 aa8.51□□□□□ -1.05
CSNK1D-208ENST00000578501 NDUFC2-KCTD14E9PQ53 114 aa8.5□□□□□ -1.05
CSNK1D-208ENST00000578501 CKS1BP61024 79 aa8.5□□□□□ -1.05
CSNK1D-208ENST00000578501 PDZD11Q5EBL8 140 aa8.5□□□□□ -1.05
CSNK1D-208ENST00000578501 SLC7A5P1Q8MH63 180 aa8.5□□□□□ -1.05
CSNK1D-208ENST00000578501 LINC00469Q8N7U9 141 aa8.5□□□□□ -1.05
CSNK1D-208ENST00000578501 CXCL5P42830 114 aa8.49□□□□□ -1.05
CSNK1D-208ENST00000578501 CBLN2Q8IUK8 224 aa8.49□□□□□ -1.05
CSNK1D-208ENST00000578501 TOMM7Q9P0U1 55 aa8.49□□□□□ -1.05
CSNK1D-208ENST00000578501 SMIM1B2RUZ4 78 aa8.48□□□□□ -1.05
CSNK1D-208ENST00000578501 ATP5LO75964 103 aa8.48□□□□□ -1.05
CSNK1D-208ENST00000578501 CHCHD1Q96BP2 118 aaKnown RBP8.48□□□□□ -1.05
CSNK1D-208ENST00000578501 F8VRH5 84 aa8.47□□□□□ -1.05
CSNK1D-208ENST00000578501 IGLC3P0DOY3 106 aa8.47□□□□□ -1.05
CSNK1D-208ENST00000578501 PMCHL1Q16048 86 aa8.47□□□□□ -1.05
CSNK1D-208ENST00000578501 GAGE2EQ4V326 116 aa8.47□□□□□ -1.05
CSNK1D-208ENST00000578501 GAGE2DQ9UEU5 116 aa8.47□□□□□ -1.05
CSNK1D-208ENST00000578501 LRP1Q07954 4544 aaKnown RBP8.47□□□□□ -1.05
CSNK1D-208ENST00000578501 FAT3Q8TDW7 4589 aa8.47□□□□□ -1.05
CSNK1D-208ENST00000578501 H3BRM9 83 aa8.46□□□□□ -1.06
CSNK1D-208ENST00000578501 NDUFA6P56556 154 aa8.45□□□□□ -1.06
CSNK1D-208ENST00000578501 COX7B2Q8TF08 81 aa8.45□□□□□ -1.06
CSNK1D-208ENST00000578501 FAM168BA1KXE4 195 aa8.44□□□□□ -1.06
CSNK1D-208ENST00000578501 PHF5AQ7RTV0 110 aaKnown RBP8.44□□□□□ -1.06
CSNK1D-208ENST00000578501 TRGC2P03986 189 aa8.43□□□□□ -1.06
CSNK1D-208ENST00000578501 SPINK8P0C7L1 97 aa8.43□□□□□ -1.06
CSNK1D-208ENST00000578501 SRSF9Q13242 221 aaKnown RBP eCLIP8.43□□□□□ -1.06
CSNK1D-208ENST00000578501 ODF1Q14990 250 aa8.43□□□□□ -1.06
CSNK1D-208ENST00000578501 C9orf129Q5T035 196 aaKnown RBP8.43□□□□□ -1.06
CSNK1D-208ENST00000578501 SPINK6Q6UWN8 80 aa8.43□□□□□ -1.06
CSNK1D-208ENST00000578501 BAGE3Q86Y29 109 aa8.43□□□□□ -1.06
CSNK1D-208ENST00000578501 KRTAP7-1Q8IUC3 87 aa8.43□□□□□ -1.06
CSNK1D-208ENST00000578501 IGLV5-39A0A0G2JS06 123 aa8.42□□□□□ -1.06
CSNK1D-208ENST00000578501 ZNF22P17026 224 aaPredicted RBP8.42□□□□□ -1.06
CSNK1D-208ENST00000578501 PSORS1C2Q9UIG4 136 aa8.42□□□□□ -1.06
CSNK1D-208ENST00000578501 COLCA2A8K830 154 aa8.41□□□□□ -1.06
CSNK1D-208ENST00000578501 FAM19A5Q7Z5A7 132 aaPredicted RBP8.41□□□□□ -1.06
CSNK1D-208ENST00000578501 IFI27L1Q96BM0 104 aa8.41□□□□□ -1.06
CSNK1D-208ENST00000578501 TRAV12-1A0A0B4J245 112 aa8.4□□□□□ -1.06
CSNK1D-208ENST00000578501 HSBP1O75506 76 aa8.4□□□□□ -1.06
CSNK1D-208ENST00000578501 C11orf86A6NJI1 115 aa8.39□□□□□ -1.07
CSNK1D-208ENST00000578501 M0QXV9 152 aa8.39□□□□□ -1.07
CSNK1D-208ENST00000578501 CHTOPQ9Y3Y2 248 aaKnown RBP8.39□□□□□ -1.07
CSNK1D-208ENST00000578501 MT1HL1P0DM35 61 aa8.38□□□□□ -1.07
CSNK1D-208ENST00000578501 C1orf137Q5JT78 98 aa8.38□□□□□ -1.07
CSNK1D-208ENST00000578501 XAGE1AQ9HD64 81 aa8.38□□□□□ -1.07
CSNK1D-208ENST00000578501 TMEM170BQ5T4T1 132 aa8.37□□□□□ -1.07
CSNK1D-208ENST00000578501 SFTA2Q6UW10 78 aa8.37□□□□□ -1.07
CSNK1D-208ENST00000578501 REG3GQ6UW15 175 aa8.37□□□□□ -1.07
CSNK1D-208ENST00000578501 LINC01600Q96MT4 127 aa8.37□□□□□ -1.07
CSNK1D-208ENST00000578501 LINC00310P59036 64 aa8.36□□□□□ -1.07
CSNK1D-208ENST00000578501 KRTAP11-1Q8IUC1 163 aa8.36□□□□□ -1.07
CSNK1D-208ENST00000578501 FAM19A2Q8N3H0 131 aa8.36□□□□□ -1.07
CSNK1D-208ENST00000578501 TP73-AS1Q9UF72 201 aa8.36□□□□□ -1.07
CSNK1D-208ENST00000578501 C22orf24Q9Y442 160 aa8.36□□□□□ -1.07
CSNK1D-208ENST00000578501 SERF1AO75920 110 aa8.35□□□□□ -1.07
CSNK1D-208ENST00000578501 IGLV7-43P04211 117 aa8.35□□□□□ -1.07
CSNK1D-208ENST00000578501 UBE2BP63146 152 aa8.35□□□□□ -1.07
CSNK1D-208ENST00000578501 COX17Q14061 63 aa8.35□□□□□ -1.07
CSNK1D-208ENST00000578501 LBHQ53QV2 105 aaPredicted RBP8.35□□□□□ -1.07
CSNK1D-208ENST00000578501 LEPROTL1O95214 131 aa8.34□□□□□ -1.07
CSNK1D-208ENST00000578501 TMEM223A0PJW6 202 aa8.33□□□□□ -1.08
CSNK1D-208ENST00000578501 HSPB8Q9UJY1 196 aa8.33□□□□□ -1.08
CSNK1D-208ENST00000578501 MRPL55Q7Z7F7 128 aaKnown RBP8.32□□□□□ -1.08
CSNK1D-208ENST00000578501 ZNF625Q96I27 306 aaPredicted RBP8.32□□□□□ -1.08
CSNK1D-208ENST00000578501 ERG28Q9UKR5 140 aa8.32□□□□□ -1.08
CSNK1D-208ENST00000578501 IGLV5-37A0A075B6J1 123 aa8.31□□□□□ -1.08
CSNK1D-208ENST00000578501 NUPR1O60356 82 aa8.31□□□□□ -1.08
CSNK1D-208ENST00000578501 PFN2P35080 140 aa8.31□□□□□ -1.08
CSNK1D-208ENST00000578501 DIRC1Q969H9 104 aa8.31□□□□□ -1.08
CSNK1D-208ENST00000578501 SCO1O75880 301 aa8.29□□□□□ -1.08
CSNK1D-208ENST00000578501 KRTAP10-8P60410 259 aa8.29□□□□□ -1.08
CSNK1D-208ENST00000578501 SND1-IT1Q9HBX3 110 aa8.29□□□□□ -1.08
CSNK1D-208ENST00000578501 TNXBP22105 4242 aa8.29□□□□□ -1.08
CSNK1D-208ENST00000578501 H0Y9J4 135 aa8.28□□□□□ -1.08
CSNK1D-208ENST00000578501 PLNP26678 52 aa8.28□□□□□ -1.08
CSNK1D-208ENST00000578501 LINC00167Q96N53 147 aa8.28□□□□□ -1.08
CSNK1D-208ENST00000578501 H0Y8G0 127 aa8.27□□□□□ -1.09
CSNK1D-208ENST00000578501 HIST1H2BKO60814 126 aa8.27□□□□□ -1.09
CSNK1D-208ENST00000578501 HIST1H2BJP06899 126 aa8.27□□□□□ -1.09
CSNK1D-208ENST00000578501 HIST1H2BOP23527 126 aa8.27□□□□□ -1.09
CSNK1D-208ENST00000578501 HIST1H2BBP33778 126 aa8.27□□□□□ -1.09
CSNK1D-208ENST00000578501 HIST1H2BDP58876 126 aa8.27□□□□□ -1.09
CSNK1D-208ENST00000578501 HIST1H2BCP62807 126 aa8.27□□□□□ -1.09
CSNK1D-208ENST00000578501 HIST2H2BEQ16778 126 aa8.27□□□□□ -1.09
CSNK1D-208ENST00000578501 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.27□□□□□ -1.09
CSNK1D-208ENST00000578501 NKAPP1Q8N9T2 125 aa8.27□□□□□ -1.09
CSNK1D-208ENST00000578501 HIST1H2BHQ93079 126 aa8.27□□□□□ -1.09
CSNK1D-208ENST00000578501 HIST1H2BNQ99877 126 aa8.27□□□□□ -1.09
CSNK1D-208ENST00000578501 HIST1H2BMQ99879 126 aa8.27□□□□□ -1.09
CSNK1D-208ENST00000578501 ZNF861PO60384 105 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms