RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 FAM231DQ6ZW35 169 aa7.09□□□□□ -1.28
SMARCE1-214ENST00000578112 DPH3Q96FX2 82 aa7.09□□□□□ -1.28
SMARCE1-214ENST00000578112 TMEM250H0YL14 139 aa7.08□□□□□ -1.28
SMARCE1-214ENST00000578112 PMCHL1Q16048 86 aa7.08□□□□□ -1.28
SMARCE1-214ENST00000578112 HRCT1Q6UXD1 115 aa7.08□□□□□ -1.28
SMARCE1-214ENST00000578112 C15orf56Q8N910 161 aa7.08□□□□□ -1.28
SMARCE1-214ENST00000578112 FAM213BQ8TBF2 198 aa7.08□□□□□ -1.28
SMARCE1-214ENST00000578112 CNFNQ9BYD5 112 aa7.08□□□□□ -1.28
SMARCE1-214ENST00000578112 IGLV4-60A0A075B6I1 120 aa7.07□□□□□ -1.28
SMARCE1-214ENST00000578112 MUC21A0A0G2JKD1 596 aa7.07□□□□□ -1.28
SMARCE1-214ENST00000578112 A0A0J9YXV3 536 aa7.07□□□□□ -1.28
SMARCE1-214ENST00000578112 MUC21A0A140T8X8 626 aa7.07□□□□□ -1.28
SMARCE1-214ENST00000578112 SLPIP03973 132 aa7.07□□□□□ -1.28
SMARCE1-214ENST00000578112 CCL20P78556 96 aa7.07□□□□□ -1.28
SMARCE1-214ENST00000578112 FAM236DA0A1B0GTK5 79 aa7.06□□□□□ -1.28
SMARCE1-214ENST00000578112 FAM236CP0DP71 79 aa7.06□□□□□ -1.28
SMARCE1-214ENST00000578112 SPCS1Q9Y6A9 102 aa7.06□□□□□ -1.28
SMARCE1-214ENST00000578112 FOXI1Q12951 378 aa7.05□□□□□ -1.28
SMARCE1-214ENST00000578112 KRTAP10-8P60410 259 aa7.05□□□□□ -1.28
SMARCE1-214ENST00000578112 CENPWQ5EE01 88 aa7.05□□□□□ -1.28
SMARCE1-214ENST00000578112 GFRA4Q9GZZ7 299 aa7.05□□□□□ -1.28
SMARCE1-214ENST00000578112 IGHV1-58A0A0C4DH39 117 aa7.04□□□□□ -1.28
SMARCE1-214ENST00000578112 GAGE2BQ13066 116 aa7.04□□□□□ -1.28
SMARCE1-214ENST00000578112 GAGE2EQ4V326 116 aa7.04□□□□□ -1.28
SMARCE1-214ENST00000578112 Q5XG85 94 aa7.04□□□□□ -1.28
SMARCE1-214ENST00000578112 GAGE2DQ9UEU5 116 aa7.04□□□□□ -1.28
SMARCE1-214ENST00000578112 CHTF8P0CG12 524 aa7.04□□□□□ -1.28
SMARCE1-214ENST00000578112 RPL13AP40429 203 aaKnown RBP7.04□□□□□ -1.28
SMARCE1-214ENST00000578112 Q6ZRP5 223 aa7.04□□□□□ -1.28
SMARCE1-214ENST00000578112 CHCHD10Q8WYQ3 142 aaPredicted RBP7.04□□□□□ -1.28
SMARCE1-214ENST00000578112 BORCS7Q96B45 105 aa7.04□□□□□ -1.28
SMARCE1-214ENST00000578112 A0A1W2PPM0 123 aa7.03□□□□□ -1.28
SMARCE1-214ENST00000578112 FABP2P12104 132 aa7.03□□□□□ -1.28
SMARCE1-214ENST00000578112 COX6A2Q02221 97 aa7.03□□□□□ -1.28
SMARCE1-214ENST00000578112 PLEKHB2Q96CS7 222 aa7.03□□□□□ -1.28
SMARCE1-214ENST00000578112 APCSP02743 223 aa7.03□□□□□ -1.28
SMARCE1-214ENST00000578112 LYZL1Q6UWQ5 148 aa7.03□□□□□ -1.28
SMARCE1-214ENST00000578112 KIR2DL4Q99706 377 aa7.03□□□□□ -1.28
SMARCE1-214ENST00000578112 TRBV6-5A0A0K0K1A5 114 aa7.02□□□□□ -1.29
SMARCE1-214ENST00000578112 SRSF9Q13242 221 aaKnown RBP eCLIP7.02□□□□□ -1.29
SMARCE1-214ENST00000578112 TNXBP22105 4242 aa7.01□□□□□ -1.29
SMARCE1-214ENST00000578112 GTSF1Q8WW33 167 aa7.01□□□□□ -1.29
SMARCE1-214ENST00000578112 SPANXDQ9BXN6 97 aa7.01□□□□□ -1.29
SMARCE1-214ENST00000578112 PRSS3P2Q8NHM4 247 aa7.01□□□□□ -1.29
SMARCE1-214ENST00000578112 CARD19Q96LW7 228 aa7.01□□□□□ -1.29
SMARCE1-214ENST00000578112 C20orf78Q9BR46 151 aa7.01□□□□□ -1.29
SMARCE1-214ENST00000578112 GNG13Q9P2W3 67 aa7.01□□□□□ -1.29
SMARCE1-214ENST00000578112 TRBV20-1A0A075B6N2 111 aa7□□□□□ -1.29
SMARCE1-214ENST00000578112 H3BUT2 72 aa7□□□□□ -1.29
SMARCE1-214ENST00000578112 HERVK_113P63121 156 aa7□□□□□ -1.29
SMARCE1-214ENST00000578112 ATOH7Q8N100 152 aa7□□□□□ -1.29
SMARCE1-214ENST00000578112 C18orf32Q8TCD1 76 aa7□□□□□ -1.29
SMARCE1-214ENST00000578112 RPP21Q9H633 154 aaKnown RBP7□□□□□ -1.29
SMARCE1-214ENST00000578112 A0A096LNI7 61 aa7□□□□□ -1.29
SMARCE1-214ENST00000578112 I3L3M4 83 aa7□□□□□ -1.29
SMARCE1-214ENST00000578112 FGF6P10767 208 aa7□□□□□ -1.29
SMARCE1-214ENST00000578112 SRP19P09132 144 aaKnown RBP6.99□□□□□ -1.29
SMARCE1-214ENST00000578112 SS18Q15532 418 aa6.99□□□□□ -1.29
SMARCE1-214ENST00000578112 TWIST1Q15672 202 aa6.99□□□□□ -1.29
SMARCE1-214ENST00000578112 NUPR1O60356 82 aa6.98□□□□□ -1.29
SMARCE1-214ENST00000578112 HIGD2BQ4VC39 106 aa6.98□□□□□ -1.29
SMARCE1-214ENST00000578112 TSKUQ8WUA8 353 aa6.98□□□□□ -1.29
SMARCE1-214ENST00000578112 H3BS24 57 aa6.98□□□□□ -1.29
SMARCE1-214ENST00000578112 KRTDAPP60985 99 aa6.98□□□□□ -1.29
SMARCE1-214ENST00000578112 PMCHL2Q9BQD1 86 aa6.98□□□□□ -1.29
SMARCE1-214ENST00000578112 IGKV2-24A0A0C4DH68 120 aa6.97□□□□□ -1.29
SMARCE1-214ENST00000578112 LINC00959A0A1B0GUT2 108 aa6.97□□□□□ -1.29
SMARCE1-214ENST00000578112 BCL2P10415 239 aa6.97□□□□□ -1.29
SMARCE1-214ENST00000578112 NMUP48645 174 aa6.97□□□□□ -1.29
SMARCE1-214ENST00000578112 SYCNQ0VAF6 134 aa6.97□□□□□ -1.29
SMARCE1-214ENST00000578112 SLC25A34Q6PIV7 304 aa6.97□□□□□ -1.29
SMARCE1-214ENST00000578112 A0A1B0GV50 99 aa6.97□□□□□ -1.29
SMARCE1-214ENST00000578112 SDHAF1A6NFY7 115 aa6.97□□□□□ -1.29
SMARCE1-214ENST00000578112 MT-ND6P03923 174 aa6.97□□□□□ -1.29
SMARCE1-214ENST00000578112 PMAIP1Q13794 54 aa6.97□□□□□ -1.29
SMARCE1-214ENST00000578112 C2orf48Q96LS8 159 aa6.97□□□□□ -1.29
SMARCE1-214ENST00000578112 NDUFC2O95298 119 aa6.96□□□□□ -1.29
SMARCE1-214ENST00000578112 FOXA3P55318 350 aaPredicted RBP6.96□□□□□ -1.29
SMARCE1-214ENST00000578112 TMEM191AQ9H0A3 160 aa6.96□□□□□ -1.29
SMARCE1-214ENST00000578112 PPP1R17O96001 155 aa6.96□□□□□ -1.3
SMARCE1-214ENST00000578112 ETDBQ3ZM63 59 aa6.96□□□□□ -1.3
SMARCE1-214ENST00000578112 IGLV4-69A0A075B6H9 119 aa6.95□□□□□ -1.3
SMARCE1-214ENST00000578112 FAM236AA0A1B0GUQ0 79 aa6.95□□□□□ -1.3
SMARCE1-214ENST00000578112 FAM236BA0A1B0GV22 79 aa6.95□□□□□ -1.3
SMARCE1-214ENST00000578112 PSORS1C2Q9UIG4 136 aa6.95□□□□□ -1.3
SMARCE1-214ENST00000578112 UBR4Q5T4S7 5183 aa6.95□□□□□ -1.3
SMARCE1-214ENST00000578112 TRBV20OR9-2A0A075B6H5 130 aa6.95□□□□□ -1.3
SMARCE1-214ENST00000578112 A8MWL6 223 aa6.95□□□□□ -1.3
SMARCE1-214ENST00000578112 J3QQQ9 107 aa6.95□□□□□ -1.3
SMARCE1-214ENST00000578112 DPM2O94777 84 aa6.95□□□□□ -1.3
SMARCE1-214ENST00000578112 PRELID3AQ96N28 172 aa6.95□□□□□ -1.3
SMARCE1-214ENST00000578112 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.94□□□□□ -1.3
SMARCE1-214ENST00000578112 IGKV3OR2-268A0A0C4DH90 116 aa6.94□□□□□ -1.3
SMARCE1-214ENST00000578112 IGKV2-29A2NJV5 120 aaPredicted RBP6.94□□□□□ -1.3
SMARCE1-214ENST00000578112 SNCGO76070 127 aa6.94□□□□□ -1.3
SMARCE1-214ENST00000578112 APOMO95445 188 aa6.94□□□□□ -1.3
SMARCE1-214ENST00000578112 CDC42SE2Q9NRR3 84 aa6.94□□□□□ -1.3
SMARCE1-214ENST00000578112 TRBV27A0A0K0K1C4 114 aa6.94□□□□□ -1.3
SMARCE1-214ENST00000578112 C9orf153Q5TBE3 101 aa6.94□□□□□ -1.3
SMARCE1-214ENST00000578112 UQCRQO14949 82 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms