RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 FAM231DQ6ZW35 169 aa3.88□□□□□ -1.79
NUP88-212ENST00000576708 TCTE3Q8IZS6 198 aa3.88□□□□□ -1.79
NUP88-212ENST00000576708 TMEM242Q9NWH2 141 aa3.88□□□□□ -1.79
NUP88-212ENST00000576708 IGLV5-45A0A087WSX0 123 aa3.87□□□□□ -1.79
NUP88-212ENST00000576708 TRBV6-5A0A0K0K1A5 114 aa3.87□□□□□ -1.79
NUP88-212ENST00000576708 SMKR1H3BMG3 65 aa3.87□□□□□ -1.79
NUP88-212ENST00000576708 I3L3M4 83 aa3.87□□□□□ -1.79
NUP88-212ENST00000576708 NCR2O95944 276 aa3.87□□□□□ -1.79
NUP88-212ENST00000576708 PRR3P79522 188 aaKnown RBP3.87□□□□□ -1.79
NUP88-212ENST00000576708 ALKAL2Q6UX46 152 aa3.87□□□□□ -1.79
NUP88-212ENST00000576708 OR5A1Q8NGJ0 315 aa3.87□□□□□ -1.79
NUP88-212ENST00000576708 C7orf33Q8WU49 177 aa3.87□□□□□ -1.79
NUP88-212ENST00000576708 TMEM126AQ9H061 195 aa3.87□□□□□ -1.79
NUP88-212ENST00000576708 LRP2P98164 4655 aa3.86□□□□□ -1.79
NUP88-212ENST00000576708 IGHV1-58A0A0C4DH39 117 aa3.86□□□□□ -1.79
NUP88-212ENST00000576708 A0A1B0GX51 115 aa3.86□□□□□ -1.79
NUP88-212ENST00000576708 A8MWL6 223 aa3.86□□□□□ -1.79
NUP88-212ENST00000576708 H7C423 109 aa3.86□□□□□ -1.79
NUP88-212ENST00000576708 LINC01547P58512 204 aaPredicted RBP3.86□□□□□ -1.79
NUP88-212ENST00000576708 RPL18AQ02543 176 aaKnown RBP3.86□□□□□ -1.79
NUP88-212ENST00000576708 RNASE13Q5GAN3 156 aaKnown RBP3.86□□□□□ -1.79
NUP88-212ENST00000576708 AMN1Q8IY45 258 aa3.86□□□□□ -1.79
NUP88-212ENST00000576708 TMEM101Q96IK0 257 aa3.86□□□□□ -1.79
NUP88-212ENST00000576708 ST20Q9HBF5 79 aa3.86□□□□□ -1.79
NUP88-212ENST00000576708 CDC42SE2Q9NRR3 84 aa3.86□□□□□ -1.79
NUP88-212ENST00000576708 HIGD1CA8MV81 97 aa3.85□□□□□ -1.79
NUP88-212ENST00000576708 TMEM250H0YL14 139 aa3.85□□□□□ -1.79
NUP88-212ENST00000576708 POLR2KP53803 58 aaKnown RBP3.85□□□□□ -1.79
NUP88-212ENST00000576708 SYCNQ0VAF6 134 aa3.85□□□□□ -1.79
NUP88-212ENST00000576708 SMAGPQ0VAQ4 97 aa3.85□□□□□ -1.79
NUP88-212ENST00000576708 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
NUP88-212ENST00000576708 CARD19Q96LW7 228 aa3.85□□□□□ -1.79
NUP88-212ENST00000576708 LINC01600Q96MT4 127 aa3.85□□□□□ -1.79
NUP88-212ENST00000576708 RNF213Q63HN8 5207 aa3.85□□□□□ -1.79
NUP88-212ENST00000576708 IGLV4-69A0A075B6H9 119 aa3.84□□□□□ -1.79
NUP88-212ENST00000576708 TRBV27A0A0K0K1C4 114 aa3.84□□□□□ -1.79
NUP88-212ENST00000576708 A0A1B0GUT8 65 aa3.84□□□□□ -1.79
NUP88-212ENST00000576708 A0A1W2PNN7 141 aa3.84□□□□□ -1.79
NUP88-212ENST00000576708 J3KT08 172 aa3.84□□□□□ -1.79
NUP88-212ENST00000576708 SRP19P09132 144 aaKnown RBP3.84□□□□□ -1.79
NUP88-212ENST00000576708 KRTAP10-8P60410 259 aa3.84□□□□□ -1.79
NUP88-212ENST00000576708 RPS28P62857 69 aaKnown RBP3.84□□□□□ -1.79
NUP88-212ENST00000576708 PMVKQ15126 192 aa3.84□□□□□ -1.79
NUP88-212ENST00000576708 SS18Q15532 418 aa3.84□□□□□ -1.79
NUP88-212ENST00000576708 PYY3Q5JQD4 70 aa3.84□□□□□ -1.79
NUP88-212ENST00000576708 C5orf38Q86SI9 138 aa3.84□□□□□ -1.79
NUP88-212ENST00000576708 CBLN2Q8IUK8 224 aa3.84□□□□□ -1.79
NUP88-212ENST00000576708 ZNF664Q8N3J9 261 aa3.84□□□□□ -1.79
NUP88-212ENST00000576708 TSKUQ8WUA8 353 aa3.84□□□□□ -1.79
NUP88-212ENST00000576708 BORCS7Q96B45 105 aa3.84□□□□□ -1.79
NUP88-212ENST00000576708 SMIM7Q9BQ49 75 aa3.84□□□□□ -1.79
NUP88-212ENST00000576708 EIF5A2Q9GZV4 153 aaKnown RBP3.84□□□□□ -1.79
NUP88-212ENST00000576708 TMEM191AQ9H0A3 160 aa3.84□□□□□ -1.79
NUP88-212ENST00000576708 SPANXCQ9NY87 97 aa3.84□□□□□ -1.79
NUP88-212ENST00000576708 V9GYV3 84 aa3.84□□□□□ -1.79
NUP88-212ENST00000576708 TRAV13-1A0A0B4J241 112 aa3.83□□□□□ -1.8
NUP88-212ENST00000576708 A0A0J9YXV3 536 aa3.83□□□□□ -1.8
NUP88-212ENST00000576708 C7orf77A4D0Y5 90 aa3.83□□□□□ -1.8
NUP88-212ENST00000576708 ZNF727A8MUV8 499 aa3.83□□□□□ -1.8
NUP88-212ENST00000576708 SRSF9Q13242 221 aaKnown RBP eCLIP3.83□□□□□ -1.8
NUP88-212ENST00000576708 Q6ZUT4 128 aa3.83□□□□□ -1.8
NUP88-212ENST00000576708 Q6ZVH6 145 aa3.83□□□□□ -1.8
NUP88-212ENST00000576708 NUP35Q8NFH5 326 aa3.83□□□□□ -1.8
NUP88-212ENST00000576708 OPRPNQ99935 248 aaPredicted RBP3.83□□□□□ -1.8
NUP88-212ENST00000576708 OSTCQ9NRP0 149 aa3.83□□□□□ -1.8
NUP88-212ENST00000576708 UBE2D4Q9Y2X8 147 aa3.83□□□□□ -1.8
NUP88-212ENST00000576708 LOC107984640A0A0U1RRK4 108 aa3.82□□□□□ -1.8
NUP88-212ENST00000576708 TMEM218A2RU14 115 aa3.82□□□□□ -1.8
NUP88-212ENST00000576708 C9JQL5 133 aa3.82□□□□□ -1.8
NUP88-212ENST00000576708 COX7A2LO14548 114 aa3.82□□□□□ -1.8
NUP88-212ENST00000576708 FCER1GP30273 86 aa3.82□□□□□ -1.8
NUP88-212ENST00000576708 RIGQ13278 110 aa3.82□□□□□ -1.8
NUP88-212ENST00000576708 MRPL51Q4U2R6 128 aaKnown RBP3.82□□□□□ -1.8
NUP88-212ENST00000576708 CLLU1Q5K131 121 aa3.82□□□□□ -1.8
NUP88-212ENST00000576708 SPINK6Q6UWN8 80 aa3.82□□□□□ -1.8
NUP88-212ENST00000576708 NAT8BQ9UHF3 227 aa3.82□□□□□ -1.8
NUP88-212ENST00000576708 PKIGQ9Y2B9 76 aa3.82□□□□□ -1.8
NUP88-212ENST00000576708 LAMTOR2Q9Y2Q5 125 aa3.82□□□□□ -1.8
NUP88-212ENST00000576708 FAM236DA0A1B0GTK5 79 aa3.81□□□□□ -1.8
NUP88-212ENST00000576708 C1orf196B1AJZ1 125 aa3.81□□□□□ -1.8
NUP88-212ENST00000576708 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.81□□□□□ -1.8
NUP88-212ENST00000576708 FAM236CP0DP71 79 aa3.81□□□□□ -1.8
NUP88-212ENST00000576708 RPL23P62829 140 aaKnown RBP3.81□□□□□ -1.8
NUP88-212ENST00000576708 RPL39P62891 51 aaKnown RBP3.81□□□□□ -1.8
NUP88-212ENST00000576708 C9orf116Q5BN46 136 aaPredicted RBP3.81□□□□□ -1.8
NUP88-212ENST00000576708 COL5A1-AS1Q5SY13 56 aa3.81□□□□□ -1.8
NUP88-212ENST00000576708 FAM104BQ5XKR9 115 aa3.81□□□□□ -1.8
NUP88-212ENST00000576708 Q6ZRP5 223 aa3.81□□□□□ -1.8
NUP88-212ENST00000576708 PHF5AQ7RTV0 110 aaKnown RBP3.81□□□□□ -1.8
NUP88-212ENST00000576708 FAM104AQ969W3 186 aa3.81□□□□□ -1.8
NUP88-212ENST00000576708 CAMK2N2Q96S95 79 aa3.81□□□□□ -1.8
NUP88-212ENST00000576708 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
NUP88-212ENST00000576708 LINC00474Q9P2X8 69 aa3.81□□□□□ -1.8
NUP88-212ENST00000576708 PSORS1C2Q9UIG4 136 aa3.81□□□□□ -1.8
NUP88-212ENST00000576708 FAM240AA0A1B0GVK7 77 aa3.8□□□□□ -1.8
NUP88-212ENST00000576708 FAM168BA1KXE4 195 aa3.8□□□□□ -1.8
NUP88-212ENST00000576708 APOMO95445 188 aa3.8□□□□□ -1.8
NUP88-212ENST00000576708 RAB5AP20339 215 aa3.8□□□□□ -1.8
NUP88-212ENST00000576708 SPAG11BQ08648 103 aa3.8□□□□□ -1.8
NUP88-212ENST00000576708 ADIRFQ15847 76 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms