RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 PMCHL2Q9BQD1 86 aa5.55□□□□□ -1.52
NUP88-211ENST00000575976 TOMM7Q9P0U1 55 aa5.55□□□□□ -1.52
NUP88-211ENST00000575976 PKHD1P08F94 4074 aa5.54□□□□□ -1.52
NUP88-211ENST00000575976 DYNC1H1Q14204 4646 aaKnown RBP5.54□□□□□ -1.52
NUP88-211ENST00000575976 C5orf52A6NGY3 159 aa5.54□□□□□ -1.52
NUP88-211ENST00000575976 H3BRM9 83 aa5.54□□□□□ -1.52
NUP88-211ENST00000575976 S100A2P29034 98 aa5.54□□□□□ -1.52
NUP88-211ENST00000575976 KRTAP10-1P60331 282 aa5.54□□□□□ -1.52
NUP88-211ENST00000575976 KRTDAPP60985 99 aa5.54□□□□□ -1.52
NUP88-211ENST00000575976 SYCNQ0VAF6 134 aa5.54□□□□□ -1.52
NUP88-211ENST00000575976 C9orf163Q8N9P6 203 aa5.54□□□□□ -1.52
NUP88-211ENST00000575976 C2orf48Q96LS8 159 aa5.54□□□□□ -1.52
NUP88-211ENST00000575976 CAMK2N2Q96S95 79 aa5.54□□□□□ -1.52
NUP88-211ENST00000575976 HIST1H2BLQ99880 126 aa5.54□□□□□ -1.52
NUP88-211ENST00000575976 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.53□□□□□ -1.52
NUP88-211ENST00000575976 DPM2O94777 84 aa5.53□□□□□ -1.52
NUP88-211ENST00000575976 PRSS2P07478 247 aa5.53□□□□□ -1.52
NUP88-211ENST00000575976 Q6ZRU5 148 aa5.53□□□□□ -1.52
NUP88-211ENST00000575976 Q8IZM0 81 aa5.53□□□□□ -1.52
NUP88-211ENST00000575976 CARD19Q96LW7 228 aa5.53□□□□□ -1.52
NUP88-211ENST00000575976 IGLV5-39A0A0G2JS06 123 aa5.52□□□□□ -1.53
NUP88-211ENST00000575976 TMEM223A0PJW6 202 aa5.52□□□□□ -1.53
NUP88-211ENST00000575976 F8WDY8 70 aa5.52□□□□□ -1.53
NUP88-211ENST00000575976 IGKCP01834 107 aa5.52□□□□□ -1.53
NUP88-211ENST00000575976 C6orf226Q5I0X4 101 aa5.52□□□□□ -1.53
NUP88-211ENST00000575976 C10orf25Q5T742 122 aa5.52□□□□□ -1.53
NUP88-211ENST00000575976 LINC01545Q5VT33 79 aa5.52□□□□□ -1.53
NUP88-211ENST00000575976 C2orf82Q6UX34 121 aa5.52□□□□□ -1.53
NUP88-211ENST00000575976 UNQ6190/PRO20217Q6UXQ8 127 aa5.52□□□□□ -1.53
NUP88-211ENST00000575976 COX7B2Q8TF08 81 aa5.52□□□□□ -1.53
NUP88-211ENST00000575976 DNAH5Q8TE73 4624 aa5.51□□□□□ -1.53
NUP88-211ENST00000575976 NDUFA1O15239 70 aa5.51□□□□□ -1.53
NUP88-211ENST00000575976 PLNP26678 52 aa5.51□□□□□ -1.53
NUP88-211ENST00000575976 CKS1BP61024 79 aa5.51□□□□□ -1.53
NUP88-211ENST00000575976 SDIM1Q6ZPB5 146 aa5.51□□□□□ -1.53
NUP88-211ENST00000575976 C6orf48Q9UBA6 75 aa5.51□□□□□ -1.53
NUP88-211ENST00000575976 FAM30AQ9NZY2 134 aa5.5□□□□□ -1.53
NUP88-211ENST00000575976 DMBT1Q9UGM3 2413 aaPredicted RBP5.49□□□□□ -1.53
NUP88-211ENST00000575976 CXCL5P42830 114 aa5.49□□□□□ -1.53
NUP88-211ENST00000575976 RNF151Q2KHN1 245 aa5.49□□□□□ -1.53
NUP88-211ENST00000575976 LRP1BQ9NZR2 4599 aa5.48□□□□□ -1.53
NUP88-211ENST00000575976 TRBV30A0A0K0K1B3 111 aa5.48□□□□□ -1.53
NUP88-211ENST00000575976 C20orf202A1L168 122 aa5.48□□□□□ -1.53
NUP88-211ENST00000575976 PANO1I0J062 215 aa5.48□□□□□ -1.53
NUP88-211ENST00000575976 LEPROTO15243 131 aa5.48□□□□□ -1.53
NUP88-211ENST00000575976 CDK2AP2O75956 126 aa5.48□□□□□ -1.53
NUP88-211ENST00000575976 CHTF8P0CG12 524 aa5.48□□□□□ -1.53
NUP88-211ENST00000575976 PCP4P48539 62 aa5.48□□□□□ -1.53
NUP88-211ENST00000575976 HERVK_113P61574 105 aa5.48□□□□□ -1.53
NUP88-211ENST00000575976 C9orf116Q5BN46 136 aaPredicted RBP5.48□□□□□ -1.53
NUP88-211ENST00000575976 LCE2CQ5TA81 110 aa5.48□□□□□ -1.53
NUP88-211ENST00000575976 Q6ZSA8 131 aa5.48□□□□□ -1.53
NUP88-211ENST00000575976 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.48□□□□□ -1.53
NUP88-211ENST00000575976 HSPG2P98160 4391 aa5.47□□□□□ -1.53
NUP88-211ENST00000575976 A0A096LNI7 61 aa5.47□□□□□ -1.53
NUP88-211ENST00000575976 LOC107984640A0A0U1RRK4 108 aa5.47□□□□□ -1.53
NUP88-211ENST00000575976 XGP55808 180 aa5.47□□□□□ -1.53
NUP88-211ENST00000575976 HAMPP81172 84 aa5.47□□□□□ -1.53
NUP88-211ENST00000575976 ATOH7Q8N100 152 aa5.47□□□□□ -1.53
NUP88-211ENST00000575976 STPG4Q8N801 248 aa5.47□□□□□ -1.53
NUP88-211ENST00000575976 IGKV2-24A0A0C4DH68 120 aa5.46□□□□□ -1.54
NUP88-211ENST00000575976 E9PLD3 99 aa5.46□□□□□ -1.54
NUP88-211ENST00000575976 TLX1NBP0CAT3 122 aa5.46□□□□□ -1.54
NUP88-211ENST00000575976 TSPEAR-AS2P59090 65 aa5.46□□□□□ -1.54
NUP88-211ENST00000575976 RPL18AQ02543 176 aaKnown RBP5.46□□□□□ -1.54
NUP88-211ENST00000575976 GAGE2BQ13066 116 aa5.46□□□□□ -1.54
NUP88-211ENST00000575976 PLEKHB2Q96CS7 222 aa5.46□□□□□ -1.54
NUP88-211ENST00000575976 ZNF625Q96I27 306 aaPredicted RBP5.46□□□□□ -1.54
NUP88-211ENST00000575976 NDUFC2-KCTD14E9PQ53 114 aa5.45□□□□□ -1.54
NUP88-211ENST00000575976 J3QQQ9 107 aa5.45□□□□□ -1.54
NUP88-211ENST00000575976 PTTG1IPP53801 180 aa5.45□□□□□ -1.54
NUP88-211ENST00000575976 CIRBPQ14011 172 aaKnown RBP5.45□□□□□ -1.54
NUP88-211ENST00000575976 Q6ZRP5 223 aa5.45□□□□□ -1.54
NUP88-211ENST00000575976 Q8N1X5 172 aa5.45□□□□□ -1.54
NUP88-211ENST00000575976 SPACA4Q8TDM5 124 aa5.45□□□□□ -1.54
NUP88-211ENST00000575976 NDUFA12Q9UI09 145 aa5.45□□□□□ -1.54
NUP88-211ENST00000575976 PKIGQ9Y2B9 76 aa5.45□□□□□ -1.54
NUP88-211ENST00000575976 DNAH8Q96JB1 4490 aa5.44□□□□□ -1.54
NUP88-211ENST00000575976 IGKV2D-26A0A0A0MRZ7 120 aa5.44□□□□□ -1.54
NUP88-211ENST00000575976 LGALS3P17931 250 aaKnown RBP5.44□□□□□ -1.54
NUP88-211ENST00000575976 AKR1D1P51857 326 aa5.44□□□□□ -1.54
NUP88-211ENST00000575976 GAGE2EQ4V326 116 aa5.44□□□□□ -1.54
NUP88-211ENST00000575976 SFTA2Q6UW10 78 aa5.44□□□□□ -1.54
NUP88-211ENST00000575976 SCXQ7RTU7 201 aa5.44□□□□□ -1.54
NUP88-211ENST00000575976 CIRBP-AS1Q8TBR5 109 aa5.44□□□□□ -1.54
NUP88-211ENST00000575976 DPH3Q96FX2 82 aa5.44□□□□□ -1.54
NUP88-211ENST00000575976 GAGE2DQ9UEU5 116 aa5.44□□□□□ -1.54
NUP88-211ENST00000575976 A0A087WYN8 130 aa5.43□□□□□ -1.54
NUP88-211ENST00000575976 MYMXA0A1B0GTQ4 84 aa5.43□□□□□ -1.54
NUP88-211ENST00000575976 PFN2P35080 140 aa5.43□□□□□ -1.54
NUP88-211ENST00000575976 HERV-K104P63124 156 aa5.43□□□□□ -1.54
NUP88-211ENST00000575976 KRTAP4-8Q9BYQ9 185 aa5.43□□□□□ -1.54
NUP88-211ENST00000575976 ERG28Q9UKR5 140 aa5.43□□□□□ -1.54
NUP88-211ENST00000575976 APOBP04114 4563 aaKnown RBP5.42□□□□□ -1.54
NUP88-211ENST00000575976 A0A0U1RRA0 63 aa5.42□□□□□ -1.54
NUP88-211ENST00000575976 A0A1W2PNN7 141 aa5.42□□□□□ -1.54
NUP88-211ENST00000575976 JOSD1Q15040 202 aaPredicted RBP5.42□□□□□ -1.54
NUP88-211ENST00000575976 MEIG1Q5JSS6 88 aa5.42□□□□□ -1.54
NUP88-211ENST00000575976 C9orf129Q5T035 196 aaKnown RBP5.42□□□□□ -1.54
NUP88-211ENST00000575976 TTTY13Q9BZ97 58 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms