RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 C10orf25Q5T742 122 aa10.98□□□□□ -0.65
CLDN7-207ENST00000574070 C2orf82Q6UX34 121 aa10.98□□□□□ -0.65
CLDN7-207ENST00000574070 STPG4Q8N801 248 aa10.98□□□□□ -0.65
CLDN7-207ENST00000574070 SERF1AO75920 110 aa10.97□□□□□ -0.65
CLDN7-207ENST00000574070 SPINK8P0C7L1 97 aa10.97□□□□□ -0.65
CLDN7-207ENST00000574070 Q8IZM0 81 aa10.97□□□□□ -0.65
CLDN7-207ENST00000574070 IFI27L1Q96BM0 104 aa10.97□□□□□ -0.65
CLDN7-207ENST00000574070 C6orf48Q9UBA6 75 aa10.97□□□□□ -0.65
CLDN7-207ENST00000574070 IGLV5-45A0A087WSX0 123 aa10.96□□□□□ -0.65
CLDN7-207ENST00000574070 IGLC3P0DOY3 106 aa10.96□□□□□ -0.65
CLDN7-207ENST00000574070 PTTG1IPP53801 180 aa10.96□□□□□ -0.65
CLDN7-207ENST00000574070 SMIM1B2RUZ4 78 aa10.95□□□□□ -0.66
CLDN7-207ENST00000574070 CHTOPQ9Y3Y2 248 aaKnown RBP10.95□□□□□ -0.66
CLDN7-207ENST00000574070 TRBV30A0A0K0K1B3 111 aa10.94□□□□□ -0.66
CLDN7-207ENST00000574070 PLAC8Q9NZF1 115 aa10.94□□□□□ -0.66
CLDN7-207ENST00000574070 H0Y8G0 127 aa10.93□□□□□ -0.66
CLDN7-207ENST00000574070 LEPROTL1O95214 131 aa10.93□□□□□ -0.66
CLDN7-207ENST00000574070 COX7B2Q8TF08 81 aa10.93□□□□□ -0.66
CLDN7-207ENST00000574070 VPS13BQ7Z7G8 4022 aa10.93□□□□□ -0.66
CLDN7-207ENST00000574070 ZNF22P17026 224 aaPredicted RBP10.92□□□□□ -0.66
CLDN7-207ENST00000574070 S100A1P23297 94 aa10.92□□□□□ -0.66
CLDN7-207ENST00000574070 CXCL5P42830 114 aa10.92□□□□□ -0.66
CLDN7-207ENST00000574070 LINC00310P59036 64 aa10.92□□□□□ -0.66
CLDN7-207ENST00000574070 RPL37AP61513 92 aaKnown RBP10.92□□□□□ -0.66
CLDN7-207ENST00000574070 GAGE2EQ4V326 116 aa10.92□□□□□ -0.66
CLDN7-207ENST00000574070 TMEM170BQ5T4T1 132 aa10.92□□□□□ -0.66
CLDN7-207ENST00000574070 GAGE2DQ9UEU5 116 aa10.92□□□□□ -0.66
CLDN7-207ENST00000574070 TRAV12-1A0A0B4J245 112 aa10.91□□□□□ -0.66
CLDN7-207ENST00000574070 C11orf86A6NJI1 115 aa10.91□□□□□ -0.66
CLDN7-207ENST00000574070 J3QL48 77 aa10.91□□□□□ -0.66
CLDN7-207ENST00000574070 NUPR1O60356 82 aa10.91□□□□□ -0.66
CLDN7-207ENST00000574070 C7orf33Q8WU49 177 aa10.91□□□□□ -0.66
CLDN7-207ENST00000574070 HIST1H2BKO60814 126 aa10.9□□□□□ -0.66
CLDN7-207ENST00000574070 ATP6V1G1O75348 118 aa10.9□□□□□ -0.66
CLDN7-207ENST00000574070 HIST1H2BJP06899 126 aa10.9□□□□□ -0.66
CLDN7-207ENST00000574070 TLX1NBP0CAT3 122 aa10.9□□□□□ -0.66
CLDN7-207ENST00000574070 FABP4P15090 132 aa10.9□□□□□ -0.66
CLDN7-207ENST00000574070 HIST1H2BOP23527 126 aa10.9□□□□□ -0.66
CLDN7-207ENST00000574070 HIST1H2BBP33778 126 aa10.9□□□□□ -0.66
CLDN7-207ENST00000574070 HIST1H2BDP58876 126 aa10.9□□□□□ -0.66
CLDN7-207ENST00000574070 HIST1H2BCP62807 126 aa10.9□□□□□ -0.66
CLDN7-207ENST00000574070 HIST2H2BEQ16778 126 aa10.9□□□□□ -0.66
CLDN7-207ENST00000574070 C9orf116Q5BN46 136 aaPredicted RBP10.9□□□□□ -0.66
CLDN7-207ENST00000574070 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.9□□□□□ -0.66
CLDN7-207ENST00000574070 HIST1H2BHQ93079 126 aa10.9□□□□□ -0.66
CLDN7-207ENST00000574070 HIST1H2BNQ99877 126 aa10.9□□□□□ -0.66
CLDN7-207ENST00000574070 HIST1H2BMQ99879 126 aa10.9□□□□□ -0.66
CLDN7-207ENST00000574070 HSPB8Q9UJY1 196 aa10.9□□□□□ -0.66
CLDN7-207ENST00000574070 F8VRH5 84 aa10.89□□□□□ -0.67
CLDN7-207ENST00000574070 Q6ZRP5 223 aa10.89□□□□□ -0.67
CLDN7-207ENST00000574070 NDUFC2-KCTD14E9PQ53 114 aa10.88□□□□□ -0.67
CLDN7-207ENST00000574070 A0A1W2PNN7 141 aa10.86□□□□□ -0.67
CLDN7-207ENST00000574070 IGLV5-39A0A0G2JS06 123 aa10.84□□□□□ -0.67
CLDN7-207ENST00000574070 UBR4Q5T4S7 5183 aa10.84□□□□□ -0.67
CLDN7-207ENST00000574070 ODF1Q14990 250 aa10.83□□□□□ -0.68
CLDN7-207ENST00000574070 FAM19A5Q7Z5A7 132 aaPredicted RBP10.83□□□□□ -0.68
CLDN7-207ENST00000574070 MAP1LC3CQ9BXW4 147 aa10.83□□□□□ -0.68
CLDN7-207ENST00000574070 TMEM223A0PJW6 202 aa10.82□□□□□ -0.68
CLDN7-207ENST00000574070 FAM168BA1KXE4 195 aa10.82□□□□□ -0.68
CLDN7-207ENST00000574070 KRTAP10-4P60372 401 aaPredicted RBP10.8□□□□□ -0.68
CLDN7-207ENST00000574070 C9orf129Q5T035 196 aaKnown RBP10.8□□□□□ -0.68
CLDN7-207ENST00000574070 PHF5AQ7RTV0 110 aaKnown RBP10.8□□□□□ -0.68
CLDN7-207ENST00000574070 XAGE1AQ9HD64 81 aa10.8□□□□□ -0.68
CLDN7-207ENST00000574070 ZNF625Q96I27 306 aaPredicted RBP10.79□□□□□ -0.68
CLDN7-207ENST00000574070 PMCHL2Q9BQD1 86 aa10.79□□□□□ -0.68
CLDN7-207ENST00000574070 DPM2O94777 84 aa10.78□□□□□ -0.68
CLDN7-207ENST00000574070 PLNP26678 52 aa10.78□□□□□ -0.68
CLDN7-207ENST00000574070 PFN2P35080 140 aa10.78□□□□□ -0.68
CLDN7-207ENST00000574070 SFTA2Q6UW10 78 aa10.77□□□□□ -0.69
CLDN7-207ENST00000574070 M0QXV9 152 aa10.76□□□□□ -0.69
CLDN7-207ENST00000574070 IGKCP01834 107 aa10.76□□□□□ -0.69
CLDN7-207ENST00000574070 PRR3P79522 188 aaKnown RBP10.76□□□□□ -0.69
CLDN7-207ENST00000574070 SERTAD4-AS1Q5TG53 156 aa10.76□□□□□ -0.69
CLDN7-207ENST00000574070 ERG28Q9UKR5 140 aa10.76□□□□□ -0.69
CLDN7-207ENST00000574070 HERVK_113P61574 105 aa10.75□□□□□ -0.69
CLDN7-207ENST00000574070 UBE2BP63146 152 aa10.75□□□□□ -0.69
CLDN7-207ENST00000574070 SYS1-DBNDD2H3BUS1 97 aa10.74□□□□□ -0.69
CLDN7-207ENST00000574070 HNRNPA3P51991 378 aaKnown RBP10.74□□□□□ -0.69
CLDN7-207ENST00000574070 COA6Q5JTJ3 125 aaKnown RBP10.74□□□□□ -0.69
CLDN7-207ENST00000574070 MEIG1Q5JSS6 88 aa10.72□□□□□ -0.69
CLDN7-207ENST00000574070 KRTAP7-1Q8IUC3 87 aa10.72□□□□□ -0.69
CLDN7-207ENST00000574070 A0A0U1RRA0 63 aa10.71□□□□□ -0.69
CLDN7-207ENST00000574070 KRTAP29-1A8MX34 341 aaPredicted RBP10.71□□□□□ -0.69
CLDN7-207ENST00000574070 LEPROTO15243 131 aa10.71□□□□□ -0.69
CLDN7-207ENST00000574070 LINC00158P58513 81 aa10.71□□□□□ -0.69
CLDN7-207ENST00000574070 COX17Q14061 63 aa10.71□□□□□ -0.69
CLDN7-207ENST00000574070 PLEKHB2Q96CS7 222 aa10.71□□□□□ -0.69
CLDN7-207ENST00000574070 PSORS1C2Q9UIG4 136 aa10.71□□□□□ -0.69
CLDN7-207ENST00000574070 C22orf24Q9Y442 160 aa10.71□□□□□ -0.69
CLDN7-207ENST00000574070 KRTDAPP60985 99 aa10.7□□□□□ -0.7
CLDN7-207ENST00000574070 C1orf137Q5JT78 98 aa10.7□□□□□ -0.7
CLDN7-207ENST00000574070 PET117Q6UWS5 81 aa10.7□□□□□ -0.7
CLDN7-207ENST00000574070 NDUFA12Q9UI09 145 aa10.7□□□□□ -0.7
CLDN7-207ENST00000574070 HMCN2Q8NDA2 5059 aa10.69□□□□□ -0.7
CLDN7-207ENST00000574070 MYMXA0A1B0GTQ4 84 aa10.69□□□□□ -0.7
CLDN7-207ENST00000574070 HERV-K104P63124 156 aa10.69□□□□□ -0.7
CLDN7-207ENST00000574070 LBHQ53QV2 105 aaPredicted RBP10.69□□□□□ -0.7
CLDN7-207ENST00000574070 C3orf79P0CE67 100 aa10.68□□□□□ -0.7
CLDN7-207ENST00000574070 LGALS3P17931 250 aaKnown RBP10.68□□□□□ -0.7
CLDN7-207ENST00000574070 NKAPP1Q8N9T2 125 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms