RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 A4D1N5 150 aa7.13□□□□□ -1.27
SMG6-213ENST00000573166 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.13□□□□□ -1.27
SMG6-213ENST00000573166 EGFEM1PQ0D2K5 195 aa7.13□□□□□ -1.27
SMG6-213ENST00000573166 A8MTW9 85 aa7.13□□□□□ -1.27
SMG6-213ENST00000573166 ANKRD29Q8N6D5 301 aa7.13□□□□□ -1.27
SMG6-213ENST00000573166 NF1P21359 2839 aa7.13□□□□□ -1.27
SMG6-213ENST00000573166 TRAV13-2A0A0B4J235 113 aa7.12□□□□□ -1.27
SMG6-213ENST00000573166 LYPD5Q6UWN5 251 aa7.12□□□□□ -1.27
SMG6-213ENST00000573166 NFE4Q86UQ8 179 aa7.12□□□□□ -1.27
SMG6-213ENST00000573166 LINC00959A0A1B0GUT2 108 aa7.12□□□□□ -1.27
SMG6-213ENST00000573166 CSNK1G2-AS1Q8NCQ2 148 aa7.12□□□□□ -1.27
SMG6-213ENST00000573166 CDC42SE2Q9NRR3 84 aa7.12□□□□□ -1.27
SMG6-213ENST00000573166 SPENQ96T58 3664 aaKnown RBP7.12□□□□□ -1.27
SMG6-213ENST00000573166 LINC00694P0DN24 101 aa7.12□□□□□ -1.27
SMG6-213ENST00000573166 ZNF22P17026 224 aaPredicted RBP7.12□□□□□ -1.27
SMG6-213ENST00000573166 CD164L2Q6UWJ8 174 aa7.12□□□□□ -1.27
SMG6-213ENST00000573166 DAND5Q8N907 189 aa7.12□□□□□ -1.27
SMG6-213ENST00000573166 IGKV2-24A0A0C4DH68 120 aa7.11□□□□□ -1.27
SMG6-213ENST00000573166 WFDC10BQ8IUB3 73 aa7.11□□□□□ -1.27
SMG6-213ENST00000573166 CHCHD7Q9BUK0 85 aa7.11□□□□□ -1.27
SMG6-213ENST00000573166 GIG44P09565 113 aaPredicted RBP7.11□□□□□ -1.27
SMG6-213ENST00000573166 IGLV4-60A0A075B6I1 120 aa7.11□□□□□ -1.27
SMG6-213ENST00000573166 LINC00315P59091 139 aa7.11□□□□□ -1.27
SMG6-213ENST00000573166 MRPS36P82909 103 aaKnown RBP7.11□□□□□ -1.27
SMG6-213ENST00000573166 FOXI1Q12951 378 aa7.1□□□□□ -1.27
SMG6-213ENST00000573166 MUSTN1Q8IVN3 82 aa7.1□□□□□ -1.27
SMG6-213ENST00000573166 LINC00526Q96FQ7 95 aa7.1□□□□□ -1.27
SMG6-213ENST00000573166 UBL5Q9BZL1 73 aa7.1□□□□□ -1.27
SMG6-213ENST00000573166 TIRAPP58753 221 aa7.1□□□□□ -1.27
SMG6-213ENST00000573166 LINC01620Q4KN68 170 aa7.09□□□□□ -1.27
SMG6-213ENST00000573166 TRACP01848 142 aa7.09□□□□□ -1.27
SMG6-213ENST00000573166 SVIPQ8NHG7 77 aa7.09□□□□□ -1.27
SMG6-213ENST00000573166 Q9UF83 564 aa7.09□□□□□ -1.27
SMG6-213ENST00000573166 NBEAL2Q6ZNJ1 2754 aa7.09□□□□□ -1.27
SMG6-213ENST00000573166 IGIPA6NJ69 53 aa7.09□□□□□ -1.27
SMG6-213ENST00000573166 SND1-IT1Q9HBX3 110 aa7.09□□□□□ -1.27
SMG6-213ENST00000573166 MIR7-3HGQ8N6C7 128 aa7.09□□□□□ -1.28
SMG6-213ENST00000573166 ACYP1P07311 99 aa7.08□□□□□ -1.28
SMG6-213ENST00000573166 BAALC-AS2P0C853 105 aa7.08□□□□□ -1.28
SMG6-213ENST00000573166 SYCNQ0VAF6 134 aa7.08□□□□□ -1.28
SMG6-213ENST00000573166 UFSP1Q6NVU6 142 aa7.08□□□□□ -1.28
SMG6-213ENST00000573166 A8MZ25 164 aa7.07□□□□□ -1.28
SMG6-213ENST00000573166 UBE2D1P51668 147 aa7.07□□□□□ -1.28
SMG6-213ENST00000573166 ESRGQ1W209 222 aa7.07□□□□□ -1.28
SMG6-213ENST00000573166 MUC7Q8TAX7 377 aa7.06□□□□□ -1.28
SMG6-213ENST00000573166 FBN2P35556 2912 aa7.06□□□□□ -1.28
SMG6-213ENST00000573166 TMEM223A0PJW6 202 aa7.06□□□□□ -1.28
SMG6-213ENST00000573166 LINC00242Q5T6M2 205 aa7.06□□□□□ -1.28
SMG6-213ENST00000573166 HAMPP81172 84 aa7.06□□□□□ -1.28
SMG6-213ENST00000573166 WWC2-AS2Q96NR7 200 aa7.06□□□□□ -1.28
SMG6-213ENST00000573166 A0A1B0GUV1 79 aa7.05□□□□□ -1.28
SMG6-213ENST00000573166 CSDC2Q9Y534 153 aaKnown RBP7.05□□□□□ -1.28
SMG6-213ENST00000573166 NTM-AS1Q6ZSK4 140 aa7.05□□□□□ -1.28
SMG6-213ENST00000573166 H3BNG1 76 aa7.04□□□□□ -1.28
SMG6-213ENST00000573166 H3BT86 120 aa7.04□□□□□ -1.28
SMG6-213ENST00000573166 TM2D3Q9BRN9 247 aa7.04□□□□□ -1.28
SMG6-213ENST00000573166 TMEM126AQ9H061 195 aa7.04□□□□□ -1.28
SMG6-213ENST00000573166 XAGE1AQ9HD64 81 aa7.04□□□□□ -1.28
SMG6-213ENST00000573166 SPANXB1Q9NS25 103 aaPredicted RBP7.04□□□□□ -1.28
SMG6-213ENST00000573166 J3KT08 172 aa7.04□□□□□ -1.28
SMG6-213ENST00000573166 WIPF1O43516 503 aa7.04□□□□□ -1.28
SMG6-213ENST00000573166 TRBV10-2A0A0K0K1G8 114 aa7.03□□□□□ -1.28
SMG6-213ENST00000573166 H0YGX0 51 aa7.03□□□□□ -1.28
SMG6-213ENST00000573166 A0A0J9YXY3 114 aa7.03□□□□□ -1.28
SMG6-213ENST00000573166 ETDCA0A1B0GVM5 59 aa7.03□□□□□ -1.28
SMG6-213ENST00000573166 CUBNO60494 3623 aa7.03□□□□□ -1.28
SMG6-213ENST00000573166 RBM3P98179 157 aaKnown RBP7.03□□□□□ -1.28
SMG6-213ENST00000573166 SPANXCQ9NY87 97 aa7.03□□□□□ -1.28
SMG6-213ENST00000573166 NCR3O14931 201 aa7.02□□□□□ -1.29
SMG6-213ENST00000573166 DSCR8Q96T75 97 aa7.02□□□□□ -1.29
SMG6-213ENST00000573166 ORMDL1Q9P0S3 153 aa7.02□□□□□ -1.29
SMG6-213ENST00000573166 F8WEM9 126 aa7.01□□□□□ -1.29
SMG6-213ENST00000573166 C1orf134Q5TEV5 83 aa7.01□□□□□ -1.29
SMG6-213ENST00000573166 IGLV4-69A0A075B6H9 119 aa7.01□□□□□ -1.29
SMG6-213ENST00000573166 PLAC8L1A1L4L8 177 aa7.01□□□□□ -1.29
SMG6-213ENST00000573166 IBA57-AS1B1ANH7 110 aa7.01□□□□□ -1.29
SMG6-213ENST00000573166 TCL1BO95988 128 aa7□□□□□ -1.29
SMG6-213ENST00000573166 LINC01556Q5JQF7 62 aa7□□□□□ -1.29
SMG6-213ENST00000573166 AMELXQ99217 191 aa7□□□□□ -1.29
SMG6-213ENST00000573166 USP17L23D6RBM5 183 aa7□□□□□ -1.29
SMG6-213ENST00000573166 MT-ATP8P03928 68 aa7□□□□□ -1.29
SMG6-213ENST00000573166 MXRA5Q9NR99 2828 aa7□□□□□ -1.29
SMG6-213ENST00000573166 A0A087WZ39 114 aa7□□□□□ -1.29
SMG6-213ENST00000573166 A0A0B4J2C4 111 aa7□□□□□ -1.29
SMG6-213ENST00000573166 COX6A2Q02221 97 aa7□□□□□ -1.29
SMG6-213ENST00000573166 FAM236AA0A1B0GUQ0 79 aa6.99□□□□□ -1.29
SMG6-213ENST00000573166 FAM236BA0A1B0GV22 79 aa6.99□□□□□ -1.29
SMG6-213ENST00000573166 CELSR1Q9NYQ6 3014 aa6.99□□□□□ -1.29
SMG6-213ENST00000573166 UNQ6190/PRO20217Q6UXQ8 127 aa6.99□□□□□ -1.29
SMG6-213ENST00000573166 Q8IZM0 81 aa6.99□□□□□ -1.29
SMG6-213ENST00000573166 LINC00588Q9Y4M8 146 aa6.99□□□□□ -1.29
SMG6-213ENST00000573166 SMIM1B2RUZ4 78 aa6.98□□□□□ -1.29
SMG6-213ENST00000573166 CLEC2BQ92478 149 aa6.98□□□□□ -1.29
SMG6-213ENST00000573166 ATOX1O00244 68 aa6.98□□□□□ -1.29
SMG6-213ENST00000573166 C5orf47Q569G3 176 aa6.98□□□□□ -1.29
SMG6-213ENST00000573166 UBE2AP49459 152 aa6.97□□□□□ -1.29
SMG6-213ENST00000573166 FAM19A5Q7Z5A7 132 aaPredicted RBP6.97□□□□□ -1.29
SMG6-213ENST00000573166 TSPEAR-AS2P59090 65 aa6.97□□□□□ -1.29
SMG6-213ENST00000573166 TMEM258P61165 79 aa6.97□□□□□ -1.29
SMG6-213ENST00000573166 Q8N3U1 123 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms