RNA–Protein interactions for RNA: ENST00000571881.2

CLDN7-204, Transcript of claudin 7, humanhuman

TSL 3 BASIC

Gene CLDN7, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-204ENST00000571881 GAGE2EQ4V326 116 aa11.55□□□□□ -0.56
CLDN7-204ENST00000571881 GAGE2DQ9UEU5 116 aa11.55□□□□□ -0.56
CLDN7-204ENST00000571881 FAT1Q14517 4588 aa11.55□□□□□ -0.56
CLDN7-204ENST00000571881 SRRM2Q9UQ35 2752 aaKnown RBP11.54□□□□□ -0.56
CLDN7-204ENST00000571881 H0Y8G0 127 aa11.53□□□□□ -0.56
CLDN7-204ENST00000571881 ATP5LO75964 103 aa11.53□□□□□ -0.56
CLDN7-204ENST00000571881 SPINK8P0C7L1 97 aa11.53□□□□□ -0.56
CLDN7-204ENST00000571881 Q8IZM0 81 aa11.53□□□□□ -0.56
CLDN7-204ENST00000571881 CHCHD1Q96BP2 118 aaKnown RBP11.53□□□□□ -0.56
CLDN7-204ENST00000571881 TRBV30A0A0K0K1B3 111 aa11.52□□□□□ -0.57
CLDN7-204ENST00000571881 SERF1AO75920 110 aa11.52□□□□□ -0.57
CLDN7-204ENST00000571881 KRTAP10-4P60372 401 aaPredicted RBP11.52□□□□□ -0.57
CLDN7-204ENST00000571881 SMIM1B2RUZ4 78 aa11.51□□□□□ -0.57
CLDN7-204ENST00000571881 H3BRM9 83 aa11.51□□□□□ -0.57
CLDN7-204ENST00000571881 C9orf116Q5BN46 136 aaPredicted RBP11.51□□□□□ -0.57
CLDN7-204ENST00000571881 PDZD11Q5EBL8 140 aa11.51□□□□□ -0.57
CLDN7-204ENST00000571881 NUPR1O60356 82 aa11.5□□□□□ -0.57
CLDN7-204ENST00000571881 FABP4P15090 132 aa11.5□□□□□ -0.57
CLDN7-204ENST00000571881 S100A1P23297 94 aa11.5□□□□□ -0.57
CLDN7-204ENST00000571881 Q6ZRP5 223 aa11.5□□□□□ -0.57
CLDN7-204ENST00000571881 COX7B2Q8TF08 81 aa11.5□□□□□ -0.57
CLDN7-204ENST00000571881 A0A1W2PNN7 141 aa11.49□□□□□ -0.57
CLDN7-204ENST00000571881 J3QL48 77 aa11.49□□□□□ -0.57
CLDN7-204ENST00000571881 FAM19A5Q7Z5A7 132 aaPredicted RBP11.49□□□□□ -0.57
CLDN7-204ENST00000571881 HNRNPA3P51991 378 aaKnown RBP11.48□□□□□ -0.57
CLDN7-204ENST00000571881 IGLV5-45A0A087WSX0 123 aa11.47□□□□□ -0.57
CLDN7-204ENST00000571881 NDUFC2-KCTD14E9PQ53 114 aa11.47□□□□□ -0.57
CLDN7-204ENST00000571881 F8VRH5 84 aa11.47□□□□□ -0.57
CLDN7-204ENST00000571881 TLX1NBP0CAT3 122 aa11.47□□□□□ -0.57
CLDN7-204ENST00000571881 IGLC3P0DOY3 106 aa11.47□□□□□ -0.57
CLDN7-204ENST00000571881 CXCL5P42830 114 aa11.47□□□□□ -0.57
CLDN7-204ENST00000571881 IFI27L1Q96BM0 104 aa11.47□□□□□ -0.57
CLDN7-204ENST00000571881 FAM168BA1KXE4 195 aa11.46□□□□□ -0.57
CLDN7-204ENST00000571881 TMEM170BQ5T4T1 132 aa11.46□□□□□ -0.57
CLDN7-204ENST00000571881 ZNF22P17026 224 aaPredicted RBP11.45□□□□□ -0.58
CLDN7-204ENST00000571881 LINC00310P59036 64 aa11.45□□□□□ -0.58
CLDN7-204ENST00000571881 PRR3P79522 188 aaKnown RBP11.45□□□□□ -0.58
CLDN7-204ENST00000571881 PHF5AQ7RTV0 110 aaKnown RBP11.45□□□□□ -0.58
CLDN7-204ENST00000571881 CHTOPQ9Y3Y2 248 aaKnown RBP11.45□□□□□ -0.58
CLDN7-204ENST00000571881 HIST1H2BKO60814 126 aa11.44□□□□□ -0.58
CLDN7-204ENST00000571881 HIST1H2BJP06899 126 aa11.44□□□□□ -0.58
CLDN7-204ENST00000571881 HIST1H2BOP23527 126 aa11.44□□□□□ -0.58
CLDN7-204ENST00000571881 HIST1H2BBP33778 126 aa11.44□□□□□ -0.58
CLDN7-204ENST00000571881 HIST1H2BDP58876 126 aa11.44□□□□□ -0.58
CLDN7-204ENST00000571881 HIST1H2BCP62807 126 aa11.44□□□□□ -0.58
CLDN7-204ENST00000571881 HIST2H2BEQ16778 126 aa11.44□□□□□ -0.58
CLDN7-204ENST00000571881 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.44□□□□□ -0.58
CLDN7-204ENST00000571881 HIST1H2BHQ93079 126 aa11.44□□□□□ -0.58
CLDN7-204ENST00000571881 HIST1H2BNQ99877 126 aa11.44□□□□□ -0.58
CLDN7-204ENST00000571881 HIST1H2BMQ99879 126 aa11.44□□□□□ -0.58
CLDN7-204ENST00000571881 C11orf86A6NJI1 115 aa11.43□□□□□ -0.58
CLDN7-204ENST00000571881 LEPROTL1O95214 131 aa11.43□□□□□ -0.58
CLDN7-204ENST00000571881 XAGE1AQ9HD64 81 aa11.41□□□□□ -0.58
CLDN7-204ENST00000571881 M0QXV9 152 aa11.4□□□□□ -0.58
CLDN7-204ENST00000571881 UBE2BP63146 152 aa11.39□□□□□ -0.59
CLDN7-204ENST00000571881 C9orf129Q5T035 196 aaKnown RBP11.39□□□□□ -0.59
CLDN7-204ENST00000571881 KRTAP29-1A8MX34 341 aaPredicted RBP11.38□□□□□ -0.59
CLDN7-204ENST00000571881 PMCHL2Q9BQD1 86 aa11.38□□□□□ -0.59
CLDN7-204ENST00000571881 HSPB8Q9UJY1 196 aa11.38□□□□□ -0.59
CLDN7-204ENST00000571881 TRAV12-1A0A0B4J245 112 aa11.37□□□□□ -0.59
CLDN7-204ENST00000571881 PKHD1L1Q86WI1 4243 aa11.36□□□□□ -0.59
CLDN7-204ENST00000571881 PFN2P35080 140 aa11.36□□□□□ -0.59
CLDN7-204ENST00000571881 C1orf137Q5JT78 98 aa11.36□□□□□ -0.59
CLDN7-204ENST00000571881 PSORS1C2Q9UIG4 136 aa11.36□□□□□ -0.59
CLDN7-204ENST00000571881 IGLV5-39A0A0G2JS06 123 aa11.35□□□□□ -0.59
CLDN7-204ENST00000571881 OXTP01178 125 aa11.35□□□□□ -0.59
CLDN7-204ENST00000571881 ZNF625Q96I27 306 aaPredicted RBP11.35□□□□□ -0.59
CLDN7-204ENST00000571881 DMBT1Q9UGM3 2413 aaPredicted RBP11.35□□□□□ -0.59
CLDN7-204ENST00000571881 SERTAD4-AS1Q5TG53 156 aa11.34□□□□□ -0.59
CLDN7-204ENST00000571881 MAP1LC3CQ9BXW4 147 aa11.33□□□□□ -0.6
CLDN7-204ENST00000571881 KRTAP7-1Q8IUC3 87 aa11.32□□□□□ -0.6
CLDN7-204ENST00000571881 TMEM223A0PJW6 202 aa11.31□□□□□ -0.6
CLDN7-204ENST00000571881 ODF1Q14990 250 aa11.31□□□□□ -0.6
CLDN7-204ENST00000571881 MYCBP2O75592 4640 aa11.3□□□□□ -0.6
CLDN7-204ENST00000571881 SPINK6Q6UWN8 80 aa11.3□□□□□ -0.6
CLDN7-204ENST00000571881 ERG28Q9UKR5 140 aa11.3□□□□□ -0.6
CLDN7-204ENST00000571881 KRTAP11-1Q8IUC1 163 aa11.29□□□□□ -0.6
CLDN7-204ENST00000571881 C22orf24Q9Y442 160 aa11.29□□□□□ -0.6
CLDN7-204ENST00000571881 LBHQ53QV2 105 aaPredicted RBP11.28□□□□□ -0.6
CLDN7-204ENST00000571881 SFTA2Q6UW10 78 aa11.28□□□□□ -0.6
CLDN7-204ENST00000571881 A0A0U1RRA0 63 aa11.27□□□□□ -0.61
CLDN7-204ENST00000571881 DPM2O94777 84 aa11.27□□□□□ -0.61
CLDN7-204ENST00000571881 KRTDAPP60985 99 aa11.27□□□□□ -0.61
CLDN7-204ENST00000571881 REG3GQ6UW15 175 aa11.27□□□□□ -0.61
CLDN7-204ENST00000571881 NKAPP1Q8N9T2 125 aa11.27□□□□□ -0.61
CLDN7-204ENST00000571881 GAGE10A6NGK3 116 aa11.26□□□□□ -0.61
CLDN7-204ENST00000571881 PLNP26678 52 aa11.26□□□□□ -0.61
CLDN7-204ENST00000571881 LINC00158P58513 81 aa11.26□□□□□ -0.61
CLDN7-204ENST00000571881 MRPL55Q7Z7F7 128 aaKnown RBP11.26□□□□□ -0.61
CLDN7-204ENST00000571881 IGKCP01834 107 aa11.25□□□□□ -0.61
CLDN7-204ENST00000571881 IGLV7-43P04211 117 aa11.25□□□□□ -0.61
CLDN7-204ENST00000571881 MEIG1Q5JSS6 88 aa11.25□□□□□ -0.61
CLDN7-204ENST00000571881 SYS1-DBNDD2H3BUS1 97 aa11.24□□□□□ -0.61
CLDN7-204ENST00000571881 HERVK_113P61574 105 aa11.24□□□□□ -0.61
CLDN7-204ENST00000571881 RPL37AP8A6NKH3 93 aa11.23□□□□□ -0.61
CLDN7-204ENST00000571881 COX17Q14061 63 aa11.23□□□□□ -0.61
CLDN7-204ENST00000571881 SND1-IT1Q9HBX3 110 aa11.23□□□□□ -0.61
CLDN7-204ENST00000571881 S100A6P06703 90 aa11.22□□□□□ -0.61
CLDN7-204ENST00000571881 C3orf79P0CE67 100 aa11.22□□□□□ -0.61
CLDN7-204ENST00000571881 SRSF9Q13242 221 aaKnown RBP eCLIP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms