RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 Q6ZSA8 131 aa13.84□□□□□ -0.19
UBFD1-210ENST00000571064 OR10D4PQ8NGN7 298 aa13.84□□□□□ -0.19
UBFD1-210ENST00000571064 ZNF561-AS1K7EIQ3 104 aa13.83□□□□□ -0.2
UBFD1-210ENST00000571064 SMIM1B2RUZ4 78 aa13.82□□□□□ -0.2
UBFD1-210ENST00000571064 F8VRH5 84 aa13.82□□□□□ -0.2
UBFD1-210ENST00000571064 C9orf163Q8N9P6 203 aa13.82□□□□□ -0.2
UBFD1-210ENST00000571064 OXTP01178 125 aa13.81□□□□□ -0.2
UBFD1-210ENST00000571064 HIST3H2BBQ8N257 126 aa13.81□□□□□ -0.2
UBFD1-210ENST00000571064 MAP1LC3CQ9BXW4 147 aa13.81□□□□□ -0.2
UBFD1-210ENST00000571064 SPINK8P0C7L1 97 aa13.8□□□□□ -0.2
UBFD1-210ENST00000571064 C2orf48Q96LS8 159 aa13.8□□□□□ -0.2
UBFD1-210ENST00000571064 S100A6P06703 90 aa13.79□□□□□ -0.2
UBFD1-210ENST00000571064 KRTAP10-4P60372 401 aaPredicted RBP13.79□□□□□ -0.2
UBFD1-210ENST00000571064 Q6ZRU5 148 aa13.79□□□□□ -0.2
UBFD1-210ENST00000571064 PMCHL2Q9BQD1 86 aa13.79□□□□□ -0.2
UBFD1-210ENST00000571064 SYS1-DBNDD2H3BUS1 97 aa13.78□□□□□ -0.2
UBFD1-210ENST00000571064 SYCNQ0VAF6 134 aa13.78□□□□□ -0.2
UBFD1-210ENST00000571064 FAT3Q8TDW7 4589 aa13.78□□□□□ -0.2
UBFD1-210ENST00000571064 H3BRM9 83 aa13.77□□□□□ -0.21
UBFD1-210ENST00000571064 C10orf25Q5T742 122 aa13.77□□□□□ -0.21
UBFD1-210ENST00000571064 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.76□□□□□ -0.21
UBFD1-210ENST00000571064 C3orf79P0CE67 100 aa13.76□□□□□ -0.21
UBFD1-210ENST00000571064 SNRPEP62304 92 aaKnown RBP13.76□□□□□ -0.21
UBFD1-210ENST00000571064 TMEM170BQ5T4T1 132 aa13.76□□□□□ -0.21
UBFD1-210ENST00000571064 SCXQ7RTU7 201 aa13.76□□□□□ -0.21
UBFD1-210ENST00000571064 CARD19Q96LW7 228 aa13.76□□□□□ -0.21
UBFD1-210ENST00000571064 CAMK2N2Q96S95 79 aa13.76□□□□□ -0.21
UBFD1-210ENST00000571064 TOMM7Q9P0U1 55 aa13.76□□□□□ -0.21
UBFD1-210ENST00000571064 IGLV5-39A0A0G2JS06 123 aa13.75□□□□□ -0.21
UBFD1-210ENST00000571064 C2orf82Q6UX34 121 aa13.75□□□□□ -0.21
UBFD1-210ENST00000571064 SDIM1Q6ZPB5 146 aa13.75□□□□□ -0.21
UBFD1-210ENST00000571064 Q8IZM0 81 aa13.75□□□□□ -0.21
UBFD1-210ENST00000571064 HIST1H2BLQ99880 126 aa13.75□□□□□ -0.21
UBFD1-210ENST00000571064 C5orf52A6NGY3 159 aa13.74□□□□□ -0.21
UBFD1-210ENST00000571064 UNQ6190/PRO20217Q6UXQ8 127 aa13.74□□□□□ -0.21
UBFD1-210ENST00000571064 TMEM223A0PJW6 202 aa13.73□□□□□ -0.21
UBFD1-210ENST00000571064 F8WDY8 70 aa13.73□□□□□ -0.21
UBFD1-210ENST00000571064 PET117Q6UWS5 81 aa13.73□□□□□ -0.21
UBFD1-210ENST00000571064 COX7B2Q8TF08 81 aa13.73□□□□□ -0.21
UBFD1-210ENST00000571064 DPM2O94777 84 aa13.72□□□□□ -0.21
UBFD1-210ENST00000571064 PRSS2P07478 247 aa13.72□□□□□ -0.21
UBFD1-210ENST00000571064 KRTDAPP60985 99 aa13.72□□□□□ -0.21
UBFD1-210ENST00000571064 LINC01545Q5VT33 79 aa13.72□□□□□ -0.21
UBFD1-210ENST00000571064 C6orf48Q9UBA6 75 aa13.72□□□□□ -0.21
UBFD1-210ENST00000571064 NDUFA1O15239 70 aa13.71□□□□□ -0.21
UBFD1-210ENST00000571064 C6orf226Q5I0X4 101 aa13.71□□□□□ -0.21
UBFD1-210ENST00000571064 IGKCP01834 107 aa13.7□□□□□ -0.22
UBFD1-210ENST00000571064 PLNP26678 52 aa13.7□□□□□ -0.22
UBFD1-210ENST00000571064 S100A2P29034 98 aa13.7□□□□□ -0.22
UBFD1-210ENST00000571064 PANO1I0J062 215 aa13.69□□□□□ -0.22
UBFD1-210ENST00000571064 RNF151Q2KHN1 245 aa13.68□□□□□ -0.22
UBFD1-210ENST00000571064 CKS1BP61024 79 aa13.67□□□□□ -0.22
UBFD1-210ENST00000571064 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.67□□□□□ -0.22
UBFD1-210ENST00000571064 CHTF8P0CG12 524 aa13.66□□□□□ -0.22
UBFD1-210ENST00000571064 C9orf116Q5BN46 136 aaPredicted RBP13.65□□□□□ -0.22
UBFD1-210ENST00000571064 CIRBP-AS1Q8TBR5 109 aa13.65□□□□□ -0.22
UBFD1-210ENST00000571064 A0A096LNI7 61 aa13.64□□□□□ -0.23
UBFD1-210ENST00000571064 TRBV30A0A0K0K1B3 111 aa13.64□□□□□ -0.23
UBFD1-210ENST00000571064 CXCL5P42830 114 aa13.64□□□□□ -0.23
UBFD1-210ENST00000571064 TMA7Q9Y2S6 64 aaKnown RBP13.63□□□□□ -0.23
UBFD1-210ENST00000571064 LOC107984640A0A0U1RRK4 108 aa13.62□□□□□ -0.23
UBFD1-210ENST00000571064 CIRBPQ14011 172 aaKnown RBP13.62□□□□□ -0.23
UBFD1-210ENST00000571064 TLX1NBP0CAT3 122 aa13.61□□□□□ -0.23
UBFD1-210ENST00000571064 TSPEAR-AS2P59090 65 aa13.61□□□□□ -0.23
UBFD1-210ENST00000571064 IGKV2-24A0A0C4DH68 120 aa13.6□□□□□ -0.23
UBFD1-210ENST00000571064 HNRNPA3P51991 378 aaKnown RBP13.6□□□□□ -0.23
UBFD1-210ENST00000571064 SPACA4Q8TDM5 124 aa13.6□□□□□ -0.23
UBFD1-210ENST00000571064 ZNF625Q96I27 306 aaPredicted RBP13.6□□□□□ -0.23
UBFD1-210ENST00000571064 LEPROTO15243 131 aa13.59□□□□□ -0.23
UBFD1-210ENST00000571064 PTTG1IPP53801 180 aa13.59□□□□□ -0.23
UBFD1-210ENST00000571064 GAGE2BQ13066 116 aa13.59□□□□□ -0.23
UBFD1-210ENST00000571064 Q6ZRP5 223 aa13.59□□□□□ -0.23
UBFD1-210ENST00000571064 C20orf202A1L168 122 aa13.58□□□□□ -0.24
UBFD1-210ENST00000571064 RPL18AQ02543 176 aaKnown RBP13.58□□□□□ -0.24
UBFD1-210ENST00000571064 STPG4Q8N801 248 aa13.58□□□□□ -0.24
UBFD1-210ENST00000571064 HERVK_113P61574 105 aa13.57□□□□□ -0.24
UBFD1-210ENST00000571064 PKHD1L1Q86WI1 4243 aa13.56□□□□□ -0.24
UBFD1-210ENST00000571064 NDUFC2-KCTD14E9PQ53 114 aa13.56□□□□□ -0.24
UBFD1-210ENST00000571064 MT1HL1P0DM35 61 aa13.56□□□□□ -0.24
UBFD1-210ENST00000571064 ATOH7Q8N100 152 aa13.56□□□□□ -0.24
UBFD1-210ENST00000571064 PKIGQ9Y2B9 76 aa13.56□□□□□ -0.24
UBFD1-210ENST00000571064 E9PLD3 99 aa13.55□□□□□ -0.24
UBFD1-210ENST00000571064 AKR1D1P51857 326 aa13.55□□□□□ -0.24
UBFD1-210ENST00000571064 RPL37AP61513 92 aaKnown RBP13.55□□□□□ -0.24
UBFD1-210ENST00000571064 MAJINQ3KP22 176 aa13.55□□□□□ -0.24
UBFD1-210ENST00000571064 PLEKHB2Q96CS7 222 aa13.55□□□□□ -0.24
UBFD1-210ENST00000571064 RNF213Q63HN8 5207 aa13.54□□□□□ -0.24
UBFD1-210ENST00000571064 J3QQQ9 107 aa13.54□□□□□ -0.24
UBFD1-210ENST00000571064 GAGE2EQ4V326 116 aa13.54□□□□□ -0.24
UBFD1-210ENST00000571064 GAGE2DQ9UEU5 116 aa13.54□□□□□ -0.24
UBFD1-210ENST00000571064 A0A087WYN8 130 aa13.53□□□□□ -0.24
UBFD1-210ENST00000571064 NDUFA12Q9UI09 145 aa13.53□□□□□ -0.24
UBFD1-210ENST00000571064 IGKV2D-26A0A0A0MRZ7 120 aa13.52□□□□□ -0.25
UBFD1-210ENST00000571064 DPH3Q96FX2 82 aa13.52□□□□□ -0.25
UBFD1-210ENST00000571064 ANKRD39Q53RE8 183 aa13.51□□□□□ -0.25
UBFD1-210ENST00000571064 SFTA2Q6UW10 78 aa13.51□□□□□ -0.25
UBFD1-210ENST00000571064 PLAC8Q9NZF1 115 aa13.51□□□□□ -0.25
UBFD1-210ENST00000571064 LINC00474Q9P2X8 69 aa13.51□□□□□ -0.25
UBFD1-210ENST00000571064 ERG28Q9UKR5 140 aa13.51□□□□□ -0.25
UBFD1-210ENST00000571064 LRP2P98164 4655 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms