RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 PYY3Q5JQD4 70 aa4.37□□□□□ -1.71
CTDNEP1-204ENST00000570484 SFTA2Q6UW10 78 aa4.37□□□□□ -1.71
CTDNEP1-204ENST00000570484 COX7B2Q8TF08 81 aa4.37□□□□□ -1.71
CTDNEP1-204ENST00000570484 PLEKHB2Q96CS7 222 aa4.37□□□□□ -1.71
CTDNEP1-204ENST00000570484 GVQW2A0A096LPI5 108 aaPredicted RBP4.36□□□□□ -1.71
CTDNEP1-204ENST00000570484 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.36□□□□□ -1.71
CTDNEP1-204ENST00000570484 E9PLD3 99 aa4.36□□□□□ -1.71
CTDNEP1-204ENST00000570484 LEPROTO15243 131 aa4.36□□□□□ -1.71
CTDNEP1-204ENST00000570484 C6orf226Q5I0X4 101 aa4.36□□□□□ -1.71
CTDNEP1-204ENST00000570484 KRTAP26-1Q6PEX3 210 aa4.36□□□□□ -1.71
CTDNEP1-204ENST00000570484 Q6ZRN7 208 aaPredicted RBP4.36□□□□□ -1.71
CTDNEP1-204ENST00000570484 Q8IZM0 81 aa4.36□□□□□ -1.71
CTDNEP1-204ENST00000570484 STPG4Q8N801 248 aa4.36□□□□□ -1.71
CTDNEP1-204ENST00000570484 CAMK2N2Q96S95 79 aa4.36□□□□□ -1.71
CTDNEP1-204ENST00000570484 PAM16Q9Y3D7 125 aa4.36□□□□□ -1.71
CTDNEP1-204ENST00000570484 DNAH7Q8WXX0 4024 aa4.36□□□□□ -1.71
CTDNEP1-204ENST00000570484 DYNC2H1Q8NCM8 4307 aaKnown RBP4.35□□□□□ -1.71
CTDNEP1-204ENST00000570484 IGLV5-39A0A0G2JS06 123 aa4.35□□□□□ -1.71
CTDNEP1-204ENST00000570484 LOC105371267A0A1B0GV96 52 aa4.35□□□□□ -1.71
CTDNEP1-204ENST00000570484 J3QQQ9 107 aa4.35□□□□□ -1.71
CTDNEP1-204ENST00000570484 NDUFA1O15239 70 aa4.35□□□□□ -1.71
CTDNEP1-204ENST00000570484 SPATA45Q537H7 98 aa4.35□□□□□ -1.71
CTDNEP1-204ENST00000570484 KRTAP5-3Q6L8H2 238 aa4.35□□□□□ -1.71
CTDNEP1-204ENST00000570484 LINC00336Q6ZUF6 198 aa4.35□□□□□ -1.71
CTDNEP1-204ENST00000570484 C15orf56Q8N910 161 aa4.35□□□□□ -1.71
CTDNEP1-204ENST00000570484 NDUFA12Q9UI09 145 aa4.35□□□□□ -1.71
CTDNEP1-204ENST00000570484 PKIGQ9Y2B9 76 aa4.35□□□□□ -1.71
CTDNEP1-204ENST00000570484 ALMS1Q8TCU4 4167 aa4.35□□□□□ -1.71
CTDNEP1-204ENST00000570484 CSMD3Q7Z407 3707 aa4.34□□□□□ -1.71
CTDNEP1-204ENST00000570484 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.34□□□□□ -1.71
CTDNEP1-204ENST00000570484 A0A087WTM6 91 aa4.34□□□□□ -1.71
CTDNEP1-204ENST00000570484 MYMXA0A1B0GTQ4 84 aa4.34□□□□□ -1.71
CTDNEP1-204ENST00000570484 ZNF815PA8K554 130 aa4.34□□□□□ -1.71
CTDNEP1-204ENST00000570484 F8WDY8 70 aa4.34□□□□□ -1.71
CTDNEP1-204ENST00000570484 HERV-K104P63124 156 aa4.34□□□□□ -1.71
CTDNEP1-204ENST00000570484 MAJINQ3KP22 176 aa4.34□□□□□ -1.71
CTDNEP1-204ENST00000570484 SCGB1D4Q6XE38 83 aa4.34□□□□□ -1.71
CTDNEP1-204ENST00000570484 C2orf48Q96LS8 159 aa4.34□□□□□ -1.71
CTDNEP1-204ENST00000570484 CARD19Q96LW7 228 aa4.34□□□□□ -1.71
CTDNEP1-204ENST00000570484 RTL8CO15255 209 aa4.33□□□□□ -1.72
CTDNEP1-204ENST00000570484 SYCNQ0VAF6 134 aa4.33□□□□□ -1.72
CTDNEP1-204ENST00000570484 MEIG1Q5JSS6 88 aa4.33□□□□□ -1.72
CTDNEP1-204ENST00000570484 Q8N814 137 aa4.33□□□□□ -1.72
CTDNEP1-204ENST00000570484 MAPKAPK5-AS1Q8N8E1 139 aa4.33□□□□□ -1.72
CTDNEP1-204ENST00000570484 LINC00526Q96FQ7 95 aa4.33□□□□□ -1.72
CTDNEP1-204ENST00000570484 C12orf57Q99622 126 aa4.33□□□□□ -1.72
CTDNEP1-204ENST00000570484 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
CTDNEP1-204ENST00000570484 TENM2Q9NT68 2774 aa4.32□□□□□ -1.72
CTDNEP1-204ENST00000570484 IGKV2D-26A0A0A0MRZ7 120 aa4.32□□□□□ -1.72
CTDNEP1-204ENST00000570484 IGLV5-52A0A0A0MRZ9 124 aa4.32□□□□□ -1.72
CTDNEP1-204ENST00000570484 TRBV30A0A0K0K1B3 111 aa4.32□□□□□ -1.72
CTDNEP1-204ENST00000570484 LRCOL1A6NCL2 159 aa4.32□□□□□ -1.72
CTDNEP1-204ENST00000570484 LINC00587B1AMM8 73 aa4.32□□□□□ -1.72
CTDNEP1-204ENST00000570484 TSPEAR-AS2P59090 65 aa4.32□□□□□ -1.72
CTDNEP1-204ENST00000570484 KRTAP10-2P60368 255 aa4.32□□□□□ -1.72
CTDNEP1-204ENST00000570484 WFDC2Q14508 124 aa4.32□□□□□ -1.72
CTDNEP1-204ENST00000570484 C2orf82Q6UX34 121 aa4.32□□□□□ -1.72
CTDNEP1-204ENST00000570484 NTN5Q8WTR8 489 aaPredicted RBP4.32□□□□□ -1.72
CTDNEP1-204ENST00000570484 ZNF625Q96I27 306 aaPredicted RBP4.32□□□□□ -1.72
CTDNEP1-204ENST00000570484 KRTAP4-5Q9BYR2 181 aa4.32□□□□□ -1.72
CTDNEP1-204ENST00000570484 PLECQ15149 4684 aaKnown RBP4.31□□□□□ -1.72
CTDNEP1-204ENST00000570484 TMEM238C9JI98 176 aa4.31□□□□□ -1.72
CTDNEP1-204ENST00000570484 TSTD3H0UI37 97 aa4.31□□□□□ -1.72
CTDNEP1-204ENST00000570484 GCSHP23434 173 aa4.31□□□□□ -1.72
CTDNEP1-204ENST00000570484 CNBPP62633 177 aaKnown RBP4.31□□□□□ -1.72
CTDNEP1-204ENST00000570484 RPL18AQ02543 176 aaKnown RBP4.31□□□□□ -1.72
CTDNEP1-204ENST00000570484 CIRBPQ14011 172 aaKnown RBP4.31□□□□□ -1.72
CTDNEP1-204ENST00000570484 KIAA0087Q14695 138 aa4.31□□□□□ -1.72
CTDNEP1-204ENST00000570484 SLC25A34Q6PIV7 304 aa4.31□□□□□ -1.72
CTDNEP1-204ENST00000570484 Q6ZRU5 148 aa4.31□□□□□ -1.72
CTDNEP1-204ENST00000570484 COX8AP10176 69 aa4.3□□□□□ -1.72
CTDNEP1-204ENST00000570484 PFN2P35080 140 aa4.3□□□□□ -1.72
CTDNEP1-204ENST00000570484 LINC00158P58513 81 aa4.3□□□□□ -1.72
CTDNEP1-204ENST00000570484 UNQ6190/PRO20217Q6UXQ8 127 aa4.3□□□□□ -1.72
CTDNEP1-204ENST00000570484 PCP2Q8IVA1 136 aa4.3□□□□□ -1.72
CTDNEP1-204ENST00000570484 C14orf144Q96I85 54 aa4.3□□□□□ -1.72
CTDNEP1-204ENST00000570484 MIEN1Q9BRT3 115 aa4.3□□□□□ -1.72
CTDNEP1-204ENST00000570484 TTTY13Q9BZ97 58 aa4.3□□□□□ -1.72
CTDNEP1-204ENST00000570484 ERG28Q9UKR5 140 aa4.3□□□□□ -1.72
CTDNEP1-204ENST00000570484 A0A0J9YXY3 114 aa4.29□□□□□ -1.72
CTDNEP1-204ENST00000570484 A0A0U1RRA0 63 aa4.29□□□□□ -1.72
CTDNEP1-204ENST00000570484 LOC107984640A0A0U1RRK4 108 aa4.29□□□□□ -1.72
CTDNEP1-204ENST00000570484 PTTG1IPP53801 180 aa4.29□□□□□ -1.72
CTDNEP1-204ENST00000570484 C10orf25Q5T742 122 aa4.29□□□□□ -1.72
CTDNEP1-204ENST00000570484 COPS9Q8WXC6 57 aa4.29□□□□□ -1.72
CTDNEP1-204ENST00000570484 C6orf48Q9UBA6 75 aa4.29□□□□□ -1.72
CTDNEP1-204ENST00000570484 UQCR10Q9UDW1 63 aa4.29□□□□□ -1.72
CTDNEP1-204ENST00000570484 LYSTQ99698 3801 aa4.29□□□□□ -1.72
CTDNEP1-204ENST00000570484 DNAH1Q9P2D7 4330 aa4.29□□□□□ -1.72
CTDNEP1-204ENST00000570484 NDUFC2-KCTD14E9PQ53 114 aa4.28□□□□□ -1.72
CTDNEP1-204ENST00000570484 DLEU1O43261 78 aa4.28□□□□□ -1.72
CTDNEP1-204ENST00000570484 TIMM17BO60830 172 aa4.28□□□□□ -1.72
CTDNEP1-204ENST00000570484 SMIM13P0DJ93 91 aa4.28□□□□□ -1.72
CTDNEP1-204ENST00000570484 HNRNPA3P51991 378 aaKnown RBP4.28□□□□□ -1.72
CTDNEP1-204ENST00000570484 COX17Q14061 63 aa4.28□□□□□ -1.72
CTDNEP1-204ENST00000570484 BOD1L2Q8IYS8 172 aa4.28□□□□□ -1.72
CTDNEP1-204ENST00000570484 LINC00518Q8N0U6 118 aa4.28□□□□□ -1.72
CTDNEP1-204ENST00000570484 PRO1933Q9H354 126 aa4.28□□□□□ -1.72
CTDNEP1-204ENST00000570484 VPS13DQ5THJ4 4388 aa4.27□□□□□ -1.73
CTDNEP1-204ENST00000570484 GAGE2BQ13066 116 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms