RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 LINC00336Q6ZUF6 198 aa8.15□□□□□ -1.1
EDC3-217ENST00000569606 PCP2Q8IVA1 136 aa8.15□□□□□ -1.1
EDC3-217ENST00000569606 ZNF625Q96I27 306 aaPredicted RBP8.15□□□□□ -1.1
EDC3-217ENST00000569606 CAMK2N2Q96S95 79 aa8.15□□□□□ -1.1
EDC3-217ENST00000569606 TTTY13Q9BZ97 58 aa8.15□□□□□ -1.1
EDC3-217ENST00000569606 NDUFA12Q9UI09 145 aa8.15□□□□□ -1.1
EDC3-217ENST00000569606 RYR2Q92736 4967 aa8.15□□□□□ -1.1
EDC3-217ENST00000569606 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.14□□□□□ -1.11
EDC3-217ENST00000569606 F8WDY8 70 aa8.14□□□□□ -1.11
EDC3-217ENST00000569606 EREGO14944 169 aa8.14□□□□□ -1.11
EDC3-217ENST00000569606 S100A12P80511 92 aa8.14□□□□□ -1.11
EDC3-217ENST00000569606 SYCNQ0VAF6 134 aa8.14□□□□□ -1.11
EDC3-217ENST00000569606 C10orf25Q5T742 122 aa8.14□□□□□ -1.11
EDC3-217ENST00000569606 UNQ6190/PRO20217Q6UXQ8 127 aa8.14□□□□□ -1.11
EDC3-217ENST00000569606 CNBPP62633 177 aaKnown RBP8.13□□□□□ -1.11
EDC3-217ENST00000569606 SFTA2Q6UW10 78 aa8.13□□□□□ -1.11
EDC3-217ENST00000569606 Q6ZRU5 148 aa8.13□□□□□ -1.11
EDC3-217ENST00000569606 FAT2Q9NYQ8 4349 aa8.13□□□□□ -1.11
EDC3-217ENST00000569606 MYMXA0A1B0GTQ4 84 aa8.12□□□□□ -1.11
EDC3-217ENST00000569606 ZNF815PA8K554 130 aa8.12□□□□□ -1.11
EDC3-217ENST00000569606 COX8AP10176 69 aa8.12□□□□□ -1.11
EDC3-217ENST00000569606 CARD19Q96LW7 228 aa8.12□□□□□ -1.11
EDC3-217ENST00000569606 C12orf57Q99622 126 aa8.12□□□□□ -1.11
EDC3-217ENST00000569606 C6orf48Q9UBA6 75 aa8.12□□□□□ -1.11
EDC3-217ENST00000569606 TRBV30A0A0K0K1B3 111 aa8.11□□□□□ -1.11
EDC3-217ENST00000569606 HERV-K104P63124 156 aa8.11□□□□□ -1.11
EDC3-217ENST00000569606 LINC00518Q8N0U6 118 aa8.11□□□□□ -1.11
EDC3-217ENST00000569606 C14orf144Q96I85 54 aa8.11□□□□□ -1.11
EDC3-217ENST00000569606 RNF151Q2KHN1 245 aa8.1□□□□□ -1.11
EDC3-217ENST00000569606 BOD1L2Q8IYS8 172 aa8.1□□□□□ -1.11
EDC3-217ENST00000569606 TP73-AS1Q9UF72 201 aa8.1□□□□□ -1.11
EDC3-217ENST00000569606 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.09□□□□□ -1.11
EDC3-217ENST00000569606 A0A0J9YXY3 114 aa8.09□□□□□ -1.11
EDC3-217ENST00000569606 FUSP35637 526 aaKnown RBP eCLIP8.09□□□□□ -1.11
EDC3-217ENST00000569606 C9orf116Q5BN46 136 aaPredicted RBP8.09□□□□□ -1.11
EDC3-217ENST00000569606 C9orf163Q8N9P6 203 aa8.09□□□□□ -1.11
EDC3-217ENST00000569606 DLEU1O43261 78 aa8.08□□□□□ -1.12
EDC3-217ENST00000569606 KRTAP10-2P60368 255 aa8.08□□□□□ -1.12
EDC3-217ENST00000569606 ERG28Q9UKR5 140 aa8.08□□□□□ -1.12
EDC3-217ENST00000569606 DNAH11Q96DT5 4516 aa8.07□□□□□ -1.12
EDC3-217ENST00000569606 IGLV5-52A0A0A0MRZ9 124 aa8.07□□□□□ -1.12
EDC3-217ENST00000569606 A0A1B0GVY2 172 aa8.07□□□□□ -1.12
EDC3-217ENST00000569606 MEIG1Q5JSS6 88 aa8.07□□□□□ -1.12
EDC3-217ENST00000569606 SLC25A34Q6PIV7 304 aa8.07□□□□□ -1.12
EDC3-217ENST00000569606 SMIM13P0DJ93 91 aa8.06□□□□□ -1.12
EDC3-217ENST00000569606 PFN2P35080 140 aa8.06□□□□□ -1.12
EDC3-217ENST00000569606 SCGB1D4Q6XE38 83 aa8.06□□□□□ -1.12
EDC3-217ENST00000569606 PRO1933Q9H354 126 aa8.06□□□□□ -1.12
EDC3-217ENST00000569606 PKD1P98161 4303 aa8.06□□□□□ -1.12
EDC3-217ENST00000569606 A0A0U1RRA0 63 aa8.05□□□□□ -1.12
EDC3-217ENST00000569606 LINC00587B1AMM8 73 aa8.05□□□□□ -1.12
EDC3-217ENST00000569606 NDUFC2-KCTD14E9PQ53 114 aa8.05□□□□□ -1.12
EDC3-217ENST00000569606 TLX1NBP0CAT3 122 aa8.05□□□□□ -1.12
EDC3-217ENST00000569606 COX17Q14061 63 aa8.05□□□□□ -1.12
EDC3-217ENST00000569606 LINC01620Q4KN68 170 aa8.05□□□□□ -1.12
EDC3-217ENST00000569606 LITAFQ99732 161 aa8.05□□□□□ -1.12
EDC3-217ENST00000569606 PGPEP1Q9NXJ5 209 aa8.05□□□□□ -1.12
EDC3-217ENST00000569606 LOC107984640A0A0U1RRK4 108 aa8.04□□□□□ -1.12
EDC3-217ENST00000569606 TIMM17BO60830 172 aa8.04□□□□□ -1.12
EDC3-217ENST00000569606 LINC00158P58513 81 aa8.04□□□□□ -1.12
EDC3-217ENST00000569606 UQCR10Q9UDW1 63 aa8.04□□□□□ -1.12
EDC3-217ENST00000569606 CIRBPQ14011 172 aaKnown RBP8.03□□□□□ -1.12
EDC3-217ENST00000569606 ADAMTSL4-AS1Q5T5F5 129 aa8.03□□□□□ -1.12
EDC3-217ENST00000569606 SDIM1Q6ZPB5 146 aa8.03□□□□□ -1.12
EDC3-217ENST00000569606 Q6ZRP5 223 aa8.03□□□□□ -1.12
EDC3-217ENST00000569606 C2orf91Q6ZV80 131 aa8.03□□□□□ -1.12
EDC3-217ENST00000569606 TMEM238C9JI98 176 aa8.02□□□□□ -1.13
EDC3-217ENST00000569606 RPL18AQ02543 176 aaKnown RBP8.02□□□□□ -1.13
EDC3-217ENST00000569606 MIR7-3HGQ8N6C7 128 aa8.02□□□□□ -1.13
EDC3-217ENST00000569606 HIGD1BQ9P298 99 aa8.02□□□□□ -1.13
EDC3-217ENST00000569606 A0A096LNI7 61 aa8.01□□□□□ -1.13
EDC3-217ENST00000569606 DAND5Q8N907 189 aa8.01□□□□□ -1.13
EDC3-217ENST00000569606 MIEN1Q9BRT3 115 aa8.01□□□□□ -1.13
EDC3-217ENST00000569606 SPANXDQ9BXN6 97 aa8.01□□□□□ -1.13
EDC3-217ENST00000569606 SPANXB1Q9NS25 103 aaPredicted RBP8.01□□□□□ -1.13
EDC3-217ENST00000569606 SPANXCQ9NY87 97 aa8.01□□□□□ -1.13
EDC3-217ENST00000569606 PKIGQ9Y2B9 76 aa8.01□□□□□ -1.13
EDC3-217ENST00000569606 C16orf90A8MZG2 172 aa8□□□□□ -1.13
EDC3-217ENST00000569606 TSTD3H0UI37 97 aa8□□□□□ -1.13
EDC3-217ENST00000569606 GCSHP23434 173 aa8□□□□□ -1.13
EDC3-217ENST00000569606 GAGE2BQ13066 116 aa8□□□□□ -1.13
EDC3-217ENST00000569606 GAGE2EQ4V326 116 aa8□□□□□ -1.13
EDC3-217ENST00000569606 SND1-IT1Q9HBX3 110 aa8□□□□□ -1.13
EDC3-217ENST00000569606 GAGE2DQ9UEU5 116 aa8□□□□□ -1.13
EDC3-217ENST00000569606 PTTG1IPP53801 180 aa7.99□□□□□ -1.13
EDC3-217ENST00000569606 XAGE1AQ9HD64 81 aa7.99□□□□□ -1.13
EDC3-217ENST00000569606 HECTD4Q9Y4D8 3996 aa7.99□□□□□ -1.13
EDC3-217ENST00000569606 EIF4EBP3O60516 100 aaPredicted RBP7.98□□□□□ -1.13
EDC3-217ENST00000569606 CHTF8P0CG12 524 aa7.98□□□□□ -1.13
EDC3-217ENST00000569606 KRTAP10-1P60331 282 aa7.98□□□□□ -1.13
EDC3-217ENST00000569606 NPC2P61916 151 aa7.98□□□□□ -1.13
EDC3-217ENST00000569606 C9orf129Q5T035 196 aaKnown RBP7.98□□□□□ -1.13
EDC3-217ENST00000569606 SOSTDC1Q6X4U4 206 aa7.98□□□□□ -1.13
EDC3-217ENST00000569606 Q6ZVH6 145 aa7.98□□□□□ -1.13
EDC3-217ENST00000569606 DNAH5Q8TE73 4624 aa7.98□□□□□ -1.13
EDC3-217ENST00000569606 IGKV2-24A0A0C4DH68 120 aa7.97□□□□□ -1.13
EDC3-217ENST00000569606 LOC107984156A0A0G2JMH3 177 aa7.97□□□□□ -1.13
EDC3-217ENST00000569606 PANO1I0J062 215 aa7.97□□□□□ -1.13
EDC3-217ENST00000569606 HNRNPA3P51991 378 aaKnown RBP7.97□□□□□ -1.13
EDC3-217ENST00000569606 SRSF9Q13242 221 aaKnown RBP eCLIP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms