RNA–Protein interactions for RNA: ENST00000568799.1

GGA2-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 1,403 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-212ENST00000568799 CST9LQ9H4G1 147 aa13.32□□□□□ -0.28
GGA2-212ENST00000568799 HSPB8Q9UJY1 196 aa13.32□□□□□ -0.28
GGA2-212ENST00000568799 UBE2D1P51668 147 aa13.31□□□□□ -0.28
GGA2-212ENST00000568799 HNRNPA3P51991 378 aaKnown RBP13.31□□□□□ -0.28
GGA2-212ENST00000568799 Q6ZRU5 148 aa13.31□□□□□ -0.28
GGA2-212ENST00000568799 FAT3Q8TDW7 4589 aa13.31□□□□□ -0.28
GGA2-212ENST00000568799 S100A6P06703 90 aa13.3□□□□□ -0.28
GGA2-212ENST00000568799 GAGE2BQ13066 116 aa13.3□□□□□ -0.28
GGA2-212ENST00000568799 FAM19A3Q7Z5A8 133 aa13.3□□□□□ -0.28
GGA2-212ENST00000568799 ORAOV1Q8WV07 137 aa13.3□□□□□ -0.28
GGA2-212ENST00000568799 PKHD1L1Q86WI1 4243 aa13.29□□□□□ -0.28
GGA2-212ENST00000568799 IGHV3OR16-9A0A0B4J2B5 98 aa13.29□□□□□ -0.28
GGA2-212ENST00000568799 FABP4P15090 132 aa13.29□□□□□ -0.28
GGA2-212ENST00000568799 PTTG1IPP53801 180 aa13.29□□□□□ -0.28
GGA2-212ENST00000568799 LINC00242Q5T6M2 205 aa13.29□□□□□ -0.28
GGA2-212ENST00000568799 TRAV12-1A0A0B4J245 112 aa13.27□□□□□ -0.29
GGA2-212ENST00000568799 SEC11AP67812 179 aa13.27□□□□□ -0.29
GGA2-212ENST00000568799 HIST3H2BBQ8N257 126 aa13.27□□□□□ -0.29
GGA2-212ENST00000568799 F8WDY8 70 aa13.26□□□□□ -0.29
GGA2-212ENST00000568799 RPL18AQ02543 176 aaKnown RBP13.26□□□□□ -0.29
GGA2-212ENST00000568799 C5orf52A6NGY3 159 aa13.25□□□□□ -0.29
GGA2-212ENST00000568799 NDUFA1O15239 70 aa13.25□□□□□ -0.29
GGA2-212ENST00000568799 SNRPEP62304 92 aaKnown RBP13.24□□□□□ -0.29
GGA2-212ENST00000568799 RNF151Q2KHN1 245 aa13.24□□□□□ -0.29
GGA2-212ENST00000568799 A0A0J9YXV3 536 aa13.23□□□□□ -0.29
GGA2-212ENST00000568799 PRR3P79522 188 aaKnown RBP13.23□□□□□ -0.29
GGA2-212ENST00000568799 MAP1LC3CQ9BXW4 147 aa13.23□□□□□ -0.29
GGA2-212ENST00000568799 MRPL35Q9NZE8 188 aaKnown RBP13.23□□□□□ -0.29
GGA2-212ENST00000568799 TINCRA0A1B0GVN0 87 aa13.22□□□□□ -0.29
GGA2-212ENST00000568799 HERVK_113P63121 156 aa13.22□□□□□ -0.29
GGA2-212ENST00000568799 A0A087WZ39 114 aa13.22□□□□□ -0.29
GGA2-212ENST00000568799 IGLC3P0DOY3 106 aa13.22□□□□□ -0.29
GGA2-212ENST00000568799 S100A2P29034 98 aa13.22□□□□□ -0.29
GGA2-212ENST00000568799 SERTAD4-AS1Q5TG53 156 aa13.22□□□□□ -0.29
GGA2-212ENST00000568799 IGLV5-45A0A087WSX0 123 aa13.21□□□□□ -0.3
GGA2-212ENST00000568799 HIST1H2BLQ99880 126 aa13.21□□□□□ -0.3
GGA2-212ENST00000568799 GEMIN7Q9H840 131 aaKnown RBP13.21□□□□□ -0.3
GGA2-212ENST00000568799 CHTOPQ9Y3Y2 248 aaKnown RBP13.21□□□□□ -0.3
GGA2-212ENST00000568799 ODF1Q14990 250 aa13.2□□□□□ -0.3
GGA2-212ENST00000568799 F8VRH5 84 aa13.19□□□□□ -0.3
GGA2-212ENST00000568799 SYS1-DBNDD2H3BUS1 97 aa13.19□□□□□ -0.3
GGA2-212ENST00000568799 Q6ZRP5 223 aa13.19□□□□□ -0.3
GGA2-212ENST00000568799 LINC01561Q8N1V8 128 aa13.19□□□□□ -0.3
GGA2-212ENST00000568799 H0Y8G0 127 aa13.17□□□□□ -0.3
GGA2-212ENST00000568799 C3orf79P0CE67 100 aa13.17□□□□□ -0.3
GGA2-212ENST00000568799 C9orf116Q5BN46 136 aaPredicted RBP13.17□□□□□ -0.3
GGA2-212ENST00000568799 PET117Q6UWS5 81 aa13.17□□□□□ -0.3
GGA2-212ENST00000568799 CDKN2A-AS1Q9UH64 79 aa13.17□□□□□ -0.3
GGA2-212ENST00000568799 TMA7Q9Y2S6 64 aaKnown RBP13.17□□□□□ -0.3
GGA2-212ENST00000568799 UNQ6190/PRO20217Q6UXQ8 127 aa13.16□□□□□ -0.3
GGA2-212ENST00000568799 A0A1W2PNN7 141 aa13.15□□□□□ -0.3
GGA2-212ENST00000568799 C11orf86A6NJI1 115 aa13.15□□□□□ -0.3
GGA2-212ENST00000568799 LINC00469Q8N7U9 141 aa13.15□□□□□ -0.3
GGA2-212ENST00000568799 PRSS2P07478 247 aa13.14□□□□□ -0.31
GGA2-212ENST00000568799 C10orf25Q5T742 122 aa13.14□□□□□ -0.31
GGA2-212ENST00000568799 C6orf48Q9UBA6 75 aa13.14□□□□□ -0.31
GGA2-212ENST00000568799 TLX1NBP0CAT3 122 aa13.13□□□□□ -0.31
GGA2-212ENST00000568799 ZNF22P17026 224 aaPredicted RBP13.13□□□□□ -0.31
GGA2-212ENST00000568799 KRTDAPP60985 99 aa13.13□□□□□ -0.31
GGA2-212ENST00000568799 LINC01545Q5VT33 79 aa13.13□□□□□ -0.31
GGA2-212ENST00000568799 TRBV30A0A0K0K1B3 111 aa13.13□□□□□ -0.31
GGA2-212ENST00000568799 PLNP26678 52 aa13.13□□□□□ -0.31
GGA2-212ENST00000568799 KIAA0087Q14695 138 aa13.13□□□□□ -0.31
GGA2-212ENST00000568799 H3BRM9 83 aa13.12□□□□□ -0.31
GGA2-212ENST00000568799 GAGE2EQ4V326 116 aa13.12□□□□□ -0.31
GGA2-212ENST00000568799 SPINK6Q6UWN8 80 aa13.12□□□□□ -0.31
GGA2-212ENST00000568799 TOMM7Q9P0U1 55 aa13.12□□□□□ -0.31
GGA2-212ENST00000568799 GAGE2DQ9UEU5 116 aa13.12□□□□□ -0.31
GGA2-212ENST00000568799 DPM2O94777 84 aa13.11□□□□□ -0.31
GGA2-212ENST00000568799 CKS1BP61024 79 aa13.11□□□□□ -0.31
GGA2-212ENST00000568799 SMIM1B2RUZ4 78 aa13.1□□□□□ -0.31
GGA2-212ENST00000568799 PMCHL2Q9BQD1 86 aa13.1□□□□□ -0.31
GGA2-212ENST00000568799 C6orf226Q5I0X4 101 aa13.09□□□□□ -0.31
GGA2-212ENST00000568799 TMEM170BQ5T4T1 132 aa13.09□□□□□ -0.31
GGA2-212ENST00000568799 REG3GQ6UW15 175 aa13.09□□□□□ -0.31
GGA2-212ENST00000568799 C2orf82Q6UX34 121 aa13.09□□□□□ -0.31
GGA2-212ENST00000568799 IGKCP01834 107 aa13.08□□□□□ -0.32
GGA2-212ENST00000568799 PHF5AQ7RTV0 110 aaKnown RBP13.08□□□□□ -0.32
GGA2-212ENST00000568799 NDUFC2-KCTD14E9PQ53 114 aa13.07□□□□□ -0.32
GGA2-212ENST00000568799 MT1HL1P0DM35 61 aa13.07□□□□□ -0.32
GGA2-212ENST00000568799 HMCN2Q8NDA2 5059 aa13.07□□□□□ -0.32
GGA2-212ENST00000568799 IGLV5-39A0A0G2JS06 123 aa13.06□□□□□ -0.32
GGA2-212ENST00000568799 C20orf202A1L168 122 aa13.06□□□□□ -0.32
GGA2-212ENST00000568799 SPINK8P0C7L1 97 aa13.06□□□□□ -0.32
GGA2-212ENST00000568799 Q8IZM0 81 aa13.06□□□□□ -0.32
GGA2-212ENST00000568799 PLA2G2DQ9UNK4 145 aa13.06□□□□□ -0.32
GGA2-212ENST00000568799 TMEM223A0PJW6 202 aa13.05□□□□□ -0.32
GGA2-212ENST00000568799 FAM19A5Q7Z5A7 132 aaPredicted RBP13.05□□□□□ -0.32
GGA2-212ENST00000568799 PSORS1C2Q9UIG4 136 aa13.05□□□□□ -0.32
GGA2-212ENST00000568799 AKR1D1P51857 326 aa13.05□□□□□ -0.32
GGA2-212ENST00000568799 C1orf137Q5JT78 98 aa13.05□□□□□ -0.32
GGA2-212ENST00000568799 LINC01600Q96MT4 127 aa13.05□□□□□ -0.32
GGA2-212ENST00000568799 FAM168BA1KXE4 195 aa13.04□□□□□ -0.32
GGA2-212ENST00000568799 SRSF9Q13242 221 aaKnown RBP eCLIP13.03□□□□□ -0.32
GGA2-212ENST00000568799 CXCL5P42830 114 aa13.01□□□□□ -0.33
GGA2-212ENST00000568799 COX7B2Q8TF08 81 aa13.01□□□□□ -0.33
GGA2-212ENST00000568799 M0QXV9 152 aa13□□□□□ -0.33
GGA2-212ENST00000568799 UBE2BP63146 152 aa13□□□□□ -0.33
GGA2-212ENST00000568799 HERVK_113P61574 105 aa12.98□□□□□ -0.33
GGA2-212ENST00000568799 TNXBP22105 4242 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms